Contig 005185:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF033A19-                                         ATGATTTACAGGATGCATAGTACATACAT
                      ____________________________________________________________
consensus                                            ATGATTTACAGGATGCATAGTACATACAT
 
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rJMSF033A19-          ATGCATATATAAGTATGTATCTCTTTATCAAGATTACTTCTCTTTATCAACTTTCTTTTC
                      ____________________________________________________________
consensus             ATGCATATATAAGTATGTATCTCTTTATCAAGATTACTTCTCTTTATCAACTTTCTTTTC
 
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rJMSF033A19-          TATCCAGCTAGCAACAATGGGAGTAAGAGCAACAGTAGGTGGAAACCTTATAGGCGACGC
JMSF033A19+                                                                  GACGC
                      ____________________________________________________________
consensus             TATCCAGCTAGCAACAATGGGAGTAAGAGCAACAGTAGGTGGAAACCTTATAGGCGACGC
 
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rJMSF033A19-          GGCCTTGTGGGCAGCATAAGCCAACGCGAAAGTCCCAACTTTCTCACCCGTCTCATTAGG
JMSF033A19+           GGCNTTGTGGGCAGCATAAGCCAACGCGAAAGTCCCAACTTTCTCACCCGTCTCATTAGG
                      ____________________________________________________________
consensus             GGCCTTGTGGGCAGCATAAGCCAACGCGAAAGTCCCAACTTTCTCACCCGTCTCATTAGG
 
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rJMSF033A19-          TGAAATCCCGACCTTCTGTAGCAATGCTTGCACATCAACTCCAGCACTGATGAGGGCATA
JMSF033A19+           TGAAATCCCGACCTTCTGTAGCAATGCTTGCACATCAACTCCAGCACTGATGAGGGCATA
                      ____________________________________________________________
consensus             TGAAATCCCGACCTTCTGTAGCAATGCTTGCACATCAACTCCAGCACTGATGAGGGCATA
 
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rJMSF033A19-          GCAGAGGCCAAAAGATATCAAGGAGAGAGTAATGGAGGTAGCCAGGTATGCTCCTCCATA
JMSF033A19+           GCAGAGGCCAAAAGATATCAAGGAGAGAGTAATGGAGGTAGCCAGGTATGCTCCTCCATA
                      ____________________________________________________________
consensus             GCAGAGGCCAAAAGATATCAAGGAGAGAGTAATGGAGGTAGCCAGGTATGCTCCTCCATA
 
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rJMSF033A19-          TTTTGCCAAAAGCTCCTTTGCTTGGTCCCCTTTTGACTTATTTTCCTGGTTATCTTCATC
JMSF033A19+           TTTTGCCAAAAGCTCCTTTGCTTGGTCCCCTTTTGACTTATTTTCCTGGTTATCTTCATC
                      ____________________________________________________________
consensus             TTTTGCCAAAAGCTCCTTTGCTTGGTCCCCTTTTGACTTATTTTCCTGGTTATCTTCATC
 
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rJMSF033A19-          TTTTGAATTGAATATCTTCCAGAGACCTGCTTCTAGGCCATATTTCTTGGTGACTTCCTC
JMSF033A19+           TTTTGAATTGAATATCTTCCAGAGACCTGCTTCTAGGCCATATTTCTTGGTGACTTCCTC
                      ____________________________________________________________
consensus             TTTTGAATTGAATATCTTCCAGAGACCTGCTTCTAGGCCATATTTCTTGGTGACTTCCTC
 
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rJMSF033A19-          TGCAGATGTCTGGGATTTGATTTCCTCTGTTTTCTCCTTCACAGCCCTCACTTTGAGCTT
JMSF033A19+           TGCAGATGTCTGGGATTTGATTTCCTCTGTTTTCTCCTTCACAGCCCTCACTTTGAGCTT
                      ____________________________________________________________
consensus             TGCAGATGTCTGGGATTTGATTTCCTCTGTTTTCTCCTTCACAGCCCTCACTTTGAGCTT
 
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rJMSF033A19-          ACTGAAACTGGGCTTGGAATTTGCAGAAGAGCTTGATGCCCTGTTTGGTTTTCCAGAACT
JMSF033A19+           ACTGAAACTGGGCTTGGAATTTGCAGAAGAGCTTGATGCCCTGTTTGGTTTTCCAGAACT
                      ____________________________________________________________
consensus             ACTGAAACTGGGCTTGGAATTTGCAGAAGAGCTTGATGCCCTGTTTGGTTTTCCAGAACT
 
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rJMSF033A19-          CAGGGGAGCCCCAGGAGGGGAAGAGAAGAGTGCAGTTTTAGTGTANTANTGAGAAGGGAG
JMSF033A19+           CAGGGGAGCCCCAGGAGGGGAAGAGAAGAGTGCAGTTTTAGTGTAGTAGTGAGAAGGGAG
                      ____________________________________________________________
consensus             CAGGGGAGCCCCAGGAGGGGAAGAGAAGAGTGCAGTTTTAGTGTAGTAGTGAGAAGGGAG
 
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rJMSF033A19-          GTGCANATGANCGGCCATTGTTAAA                                   
JMSF033A19+           GTGCAGATGAGCGGCCATTGTTAAAAGTAGCTAAAGAACTATCTCTTCTGGTTGTTTTAA
                      ____________________________________________________________
consensus             GTGCAGATGAGCGGCCATTGTTAAAAGTAGCTAAAGAACTATCTCTTCTGGTTGTTTTAA
 
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JMSF033A19+           CTTTGTTATCCAAACATGGCCTTGATACTTTCTTCCTGGACAGAGAGAGAACAATTTTCC
                      ____________________________________________________________
consensus             CTTTGTTATCCAAACATGGCCTTGATACTTTCTTCCTGGACAGAGAGAGAACAATTTTCC