Contig 005184:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E20Sequence535005184 (3)ref|XP_006346471.1|2e-45PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic-592005340 (2)ref|XP_002521834.1|6e-06N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis] gb|EEF
JMFN028F09Sequence531005184 (3)ref|XP_006346471.1|9e-49PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic-
JMSF033A10Sequence601005184 (3)ref|XP_006346471.1|1e-63PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic-464005340 (2)emb|CDP04582.1|8e-22unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN028F09+                                                AGTTGGCAGACCTATGATGATTT
JMSF033A10+                                                                     TT
                      ____________________________________________________________
consensus                                                  AGTTGGCAGACCTATGATGATTT
 
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JMFN028F09+           CCTGGGTTGTTCCATGTGGTAAACAACAAAACACTGCATCCACAGAAGAAAAGATGTGCA
JMSF033A10+           CCTGGGTTGTTCCATGTGGTAAACAACAAAACACTGCATCCACAGAAGAAAA-ATCTGCA
                      ____________________________________________________________
consensus             CCTGGGTTGTTCCATGTGGTAAACAACAAAACACTGCATCCACAGAAGAAAAGATGTGCA
 
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JMFN028F09+           TCCTTGACAGCAACCAGGTTTGGCAAATCTTGTGATACCAAGTGAGGAAAAACAGATTCT
JMFF006E20+               TGACAGCAACCAGGTTTGGCAAATCTTGTGATACCAAGTGAGGAAAAACAGATTCT
JMSF033A10+           TCCTTGACAGCAACCAGGTTTGGCAAATCTTGTGATACCAAGTGAGGAAAAACAGATTCT
                      ____________________________________________________________
consensus             TCCTTGACAGCAACCAGGTTTGGCAAATCTTGTGATACCAAGTGAGGAAAAACAGATTCT
 
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JMFN028F09+           ATCGATTGACCAGCTTTTCTATCTGCAGTCATTAGAGTGATCTTGAATTGGGGATGATTT
JMFF006E20+           ATCGATTGACCAGCTTTTCTATCTGCAGTCATTAGAGTGATCTTGAATTGGGGATGATTT
JMSF033A10+           ATCGATTGACCAGCTTTTCTATCTGCAGTCATTAGAGTGATCTTGAATTGGGGATGATTT
                      ____________________________________________________________
consensus             ATCGATTGACCAGCTTTTCTATCTGCAGTCATTAGAGTGATCTTGAATTGGGGATGATTT
 
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JMFN028F09+           GCCAGGAGTCTGATAATCTCAGAGCCAGTATAGCCACTAGCTCCAAGAACACCAATTCGA
JMFF006E20+           GCCAGGAGTCTGATAATCTCAGAGCCAGTATAGCCACTAGCTCCAAGAACACCAATTCGA
JMSF033A10+           GCCAGGAGTCTGATAATCTCAGAGCCAGTATAGCCACTAGCTCCAAGAACACCAATTCGA
                      ____________________________________________________________
consensus             GCCAGGAGTCTGATAATCTCAGAGCCAGTATAGCCACTAGCTCCAAGAACACCAATTCGA
 
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JMFN028F09+           AACTTTTCTGATTGTTGAGCTTTAGCCGCCGAAAACTGCAAACTTTGCGGTGGAGGTGAC
JMFF006E20+           AACTTTTCTGATTGTTGAGCTTTAGCCGCCGAAAACTGCAAACTTTGCGGTGGAGGTGAC
JMSF033A10+           AACTTTTCTGATTGTTGAGCTTTAGCCGCCGAAAACTGCAAACTTTGCGGTGGAGGTGAC
                      ____________________________________________________________
consensus             AACTTTTCTGATTGTTGAGCTTTAGCCGCCGAAAACTGCAAACTTTGCGGTGGAGGTGAC
 
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JMFN028F09+           GCCACTGAAGAAGCTCTAACACAGAGCTTCCTCGGCTTTGAACTCTTCAATTCATCCTGA
JMFF006E20+           GCCACTGAAGAAGCTCTAACACAGAGCTTCCTCGGCTTTGAACTCTTCAATTCATCCTGA
JMSF033A10+           GCCACTGAAGAAGCTCTAACACAGAGCTTCCTCGGCTTTGAACTCTTCAATTCATCCTGA
                      ____________________________________________________________
consensus             GCCACTGAAGAAGCTCTAACACAGAGCTTCCTCGGCTTTGAACTCTTCAATTCATCCTGA
 
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JMFN028F09+           AACTTCAAAGGGTAACCTCGATCGAGACAACTCGAACTAAAAGCACCTAAAGAACTCATC
JMFF006E20+           AACTTCAAAGGGTAACCTCGATCGAGACAACTCGAACTAAAAGCACCTAAAGAACTCATC
JMSF033A10+           AACTTCAAAGGGTAACCTCGATCGAGACAACTCGAACTAAAAGCACCTAAAGAACTCATC
                      ____________________________________________________________
consensus             AACTTCAAAGGGTAACCTCGATCGAGACAACTCGAACTAAAAGCACCTAAAGAACTCATC
 
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JMFN028F09+           TTTACGGCTAAACTCTGAGTGTGAGACGAGGGAAACTTTATAGACCAAAAAAAGTAAAAA
JMFF006E20+           TTTACGGCTAAACTCTGAGTGTGAGACGAGGGAAACTTTATAGACCAAAAAAAGTAAAAA
JMSF033A10+           TTTACGGCTAAACTCTGAGTGTGAGACGAGGGAAACTTTATAGACCAAAAAAAGTAAAAA
                      ____________________________________________________________
consensus             TTTACGGCTAAACTCTGAGTGTGAGACGAGGGAAACTTTATAGACCAAAAAAAGTAAAAA
 
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JMFN028F09+           ATTGTAGGCTCGTAGCAGAAATGGGAAG                                
JMFF006E20+           ATTGTAGGCTCGTAGCAGAAATGGGAAGCTCAAGAGTCAAGAGCCCAACACCGACAGCGG
JMSF033A10+           ATTGTAGGCTCGTAGCAGAAATGGGAAGCTCAAGAGTCAAGAGCCCAACACCGACAGCGG
                      ____________________________________________________________
consensus             ATTGTAGGCTCGTAGCAGAAATGGGAAGCTCAAGAGTCAAGAGCCCAACACCGACAGCGG
 
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JMFF006E20+           CGGAGACAGTGGTATGGCGCAGAACTACAGAAACTATTACTCCGTGTATTCGGTCATTT 
JMSF033A10+           CGGAGACAGTGGTATGGCGCAGAACTACAGAAACTATTACTCCGTGTATTCGGTCATTTC
                      ____________________________________________________________
consensus             CGGAGACAGTGGTATGGCGCAGAACTACAGAAACTATTACTCCGTGTATTCGGTCATTTC