Contig 005182:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF032L07+                                     GCGCTAGTCTTCACATTCTTGCATTCTTTCTTC
JMSF032L07-                                      GCGCTAGTCTTCACATTCTTGCATTCTTTCTTC
                      ____________________________________________________________
consensus                                        GCGCTAGTCTTCACATTCTTGCATTCTTTCTTC
 
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rJMSF032L07+          TCATTCAATCCTAAATATAATATAATATAATATTATATTCCAAACTTAATAAAATAAAAT
JMSF032L07-           TCATTCAATCCTAAATATAATATAATATAATATTATATTCCAAACTTAATAAAATAAAAT
                      ____________________________________________________________
consensus             TCATTCAATCCTAAATATAATATAATATAATATTATATTCCAAACTTAATAAAATAAAAT
 
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rJMSF032L07+          AAAAAGAAAAGTGGGAATGAGAAAATCAAGCAAGCTTCCTCAAGCTGCGGTTCTAAAGCA
JMSF032L07-           AAAAAGAAAAGTGGGAATGAGAAAATCAAGCAAGCTTCCTCAAGCTGCGGTTCTAAAGCA
                      ____________________________________________________________
consensus             AAAAAGAAAAGTGGGAATGAGAAAATCAAGCAAGCTTCCTCAAGCTGCGGTTCTAAAGCA
 
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rJMSF032L07+          GATGATCAGAAGGTGCTCCAGTCAGTTCAAGCAGAAACACGGGTACGCCGGCGACGACCT
JMSF032L07-           GATGATCAGAAGGTGCTCCAGTCAGTTCAAGCAGAAACACGGGTACGCCGGCGACGACCT
                      ____________________________________________________________
consensus             GATGATCAGAAGGTGCTCCAGTCAGTTCAAGCAGAAACACGGGTACGCCGGCGACGACCT
 
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rJMSF032L07+          TCCGGTGGACGTGCCGAAAGGGCATTTCGCAGTCTACGTCGGCGAAAACAGAAGCAGATA
JMSF032L07-           TCCGGTGGACGTGCCGAAAGGGCATTTCGCAGTCTACGTCGGCGAAAACAGAAGCAGATA
                      ____________________________________________________________
consensus             TCCGGTGGACGTGCCGAAAGGGCATTTCGCAGTCTACGTCGGCGAAAACAGAAGCAGATA
 
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rJMSF032L07+          CATAGTACCAATCTCGTTCTTGGATCACCCCCAGTTTCAATGTCTCCTCAGACGCGCCGA
JMSF032L07-           CATAGTACCAATCTCGTTCTTGGATCACCCCCAGTTTCAATGTCTCCTCAGACGCGCCGA
                      ____________________________________________________________
consensus             CATAGTACCAATCTCGTTCTTGGATCACCCCCAGTTTCAATGTCTCCTCAGACGCGCCGA
 
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rJMSF032L07+          GGAAGAGTTCGGATTCCATCACGAAATGGGCATCACCATTCCCTGCGACGAGATGGCTTT
JMSF032L07-           GGAAGAGTTCGGATTCCATCACGAAATGGGCATCACCATTCCCTGCGACGAGATGGCTTT
                      ____________________________________________________________
consensus             GGAAGAGTTCGGATTCCATCACGAAATGGGCATCACCATTCCCTGCGACGAGATGGCTTT
 
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rJMSF032L07+          CCGATCGCTCACGGCAATGCTCCGGTAGACTCACCTCCAACTCTATATTTATATATATGT
JMSF032L07-           CCGATCGCTCACGGCAATGCTCCGGTAGACTCACCTCCAACTCTATATTTATATATATGT
                      ____________________________________________________________
consensus             CCGATCGCTCACGGCAATGCTCCGGTAGACTCACCTCCAACTCTATATTTATATATATGT
 
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rJMSF032L07+          GTGTGTGTATATATGAAGACTTTGCGCGGAGAAGATGGCTGCTTAAGATGAAGCTCTGAT
JMSF032L07-           GTGTGTGTATATATGAAGACTTTGCGCGGAGAAGATGGCTGCTTAAGATGAAGCTCTGAT
                      ____________________________________________________________
consensus             GTGTGTGTATATATGAAGACTTTGCGCGGAGAAGATGGCTGCTTAAGATGAAGCTCTGAT
 
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rJMSF032L07+          CTGATCGGTCTGATCTGTGTTTAGCTTTTATCTTTTTTCAACGTCTTAATTCCTTCGCCG
JMSF032L07-           CTGATCGGTCTGATCTGTGTTTAGCTTTTATCTTTTTTCAACGTCTTAATTCCTTCGCCG
                      ____________________________________________________________
consensus             CTGATCGGTCTGATCTGTGTTTAGCTTTTATCTTTTTTCAACGTCTTAATTCCTTCGCCG
 
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rJMSF032L07+          GAGTATATTGTTTTAGATTTCTTGTAAGTTGCAAATTTTCCCGAGCT             
JMSF032L07-           GAGTATATTGTTTTAGATTTCTTGTAAGTTGCAAATTTTCCCGAGCTCATTTTGGGTCAA
                      ____________________________________________________________
consensus             GAGTATATTGTTTTAGATTTCTTGTAAGTTGCAAATTTTCCCGAGCTCATTTTGGGTCAA
 
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JMSF032L07-           TCACCTCTAATTTGCCCGGCCGATCCCATTTCATGTTGTTTATGGGTTCTTCTTAATTTG
                      ____________________________________________________________
consensus             TCACCTCTAATTTGCCCGGCCGATCCCATTTCATGTTGTTTATGGGTTCTTCTTAATTTG