Contig 005178:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF032H14Sequence681005178 (3)ref|XP_009629213.1|2e-67PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic-like isofor770013050 (3)ref|XP_009795941.1|8e-123PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X2
JMSF041G24Sequence727005178 (3)ref|XP_009629213.1|2e-86PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic-like isofor671013050 (3)ref|XP_010313888.1|2e-103PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X3
JMSF049H21Sequence701005178 (3)ref|XP_009629213.1|6e-81PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic-like isofor

Alignment

This contig is upended


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JMSF041G24+                    CGGATCCTTATCCTTTATCGACTCTATAAGGCTTTGCAATCCACCCTTGCC
JMSF049H21+                                                       GCAATCCACCCTTGCC
                      ____________________________________________________________
consensus                      CGGATCCTTATCCTTTATCGACTCTATAAGGCTTTGCAATCCACCCTTGCC
 
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JMSF041G24+           ATCAATTAGAGATGCATATAAGACAGAACCATTTTCTCTCAAGTCAATGGGTATACTACC
JMSF049H21+           ATCAATTAGAGATGCATATAAGACAGAACCATTTTCTCTCAAGTCAATGGGTATACTACC
JMSF032H14+                                                  CAAGTCAATGGGTATACTACC
                      ____________________________________________________________
consensus             ATCAATTAGAGATGCATATAAGACAGAACCATTTTCTCTCAAGTCAATGGGTATACTACC
 
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JMSF041G24+           CAATATGGCTTCCTTTTCATCGGTTGCAATCTTAAGAGCTTTCTTCACATTACCCTCCAT
JMSF049H21+           CAATATGGCTTCCTTTTCATCGGTTGCAATCTTAAGAGCTTTCTTCACATTACCCTCCAT
JMSF032H14+           CAATATGGCTTCCTTTTCATCGGTTGCAATCTTAAGAGCTTTCTTCACATTACCCTCCAT
                      ____________________________________________________________
consensus             CAATATGGCTTCCTTTTCATCGGTTGCAATCTTAAGAGCTTTCTTCACATTACCCTCCAT
 
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JMSF041G24+           TGTTCCGAATGGTTTTCTCTGTGGAATCCTTAGCAAGTATGAAATGTCCTCAAGGGATTC
JMSF049H21+           TGTTCCGAATGGTTTTCTCTGTGGAATCCTTAGCAAGTATGAAATGTCCTCAAGGGATTC
JMSF032H14+           TGTTCCGAATGGTTTTCTCTGTGGAATCCTTAGCAAGTATGAAATGTCCTCAAGGGATTC
                      ____________________________________________________________
consensus             TGTTCCGAATGGTTTTCTCTGTGGAATCCTTAGCAAGTATGAAATGTCCTCAAGGGATTC
 
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JMSF041G24+           CTGAATAGCTTTCATACTGGTGTTTGCTGGGATAGCTCTTCTCAGAGCCAATTCACCTGT
JMSF049H21+           CTGAATAGCTTTCATACTGGTGTTTGCTGGGATAGCTCTTCTCAGAGCCAATTCACCTGT
JMSF032H14+           CTGAATAGCTTTCATACTGGTGTTTGCTGGGATAGCTCTTCTCAGAGCCAATTCACCTGT
                      ____________________________________________________________
consensus             CTGAATAGCTTTCATACTGGTGTTTGCTGGGATAGCTCTTCTCAGAGCCAATTCACCTGT
 
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JMSF041G24+           TCTAGGAAGTTTTGTCTCTGGGGAATAAAGTACTGCCTCCGCAGGTGAAACATCCCATGA
JMSF049H21+           TCTAGGAAGTTTTGTCTCTGGGGAATAAAGTACTGCCTCCGCAGGTGAAACATCCCATGA
JMSF032H14+           TCTAGGAAGTTTTGTCTCTGGGGAATAAAGTACTGCCTCCGCAGGTGAAACATCCCATGA
                      ____________________________________________________________
consensus             TCTAGGAAGTTTTGTCTCTGGGGAATAAAGTACTGCCTCCGCAGGTGAAACATCCCATGA
 
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JMSF041G24+           TTCCCAACCAGACAATGGAACTGGACATGCAACTTGAACAAATATAATGAACACAGCTAT
JMSF049H21+           TTCCCAACCAGACAATGGAACTGGACATGCAACTTGAACAAATATAATGAACACAGCTAT
JMSF032H14+           TTCCCAACCAGACAATGGAACTGGACATGCAACTTGAACAAATATAATGAACACAGCTAT
                      ____________________________________________________________
consensus             TTCCCAACCAGACAATGGAACTGGACATGCAACTTGAACAAATATAATGAACACAGCTAT
 
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JMSF041G24+           TGCTGTCTCAAGTCGTTTCATTCCATGTTCCAAAAACCTTGACAAACTGGAGACTGTAGT
JMSF049H21+           TGCTGTCTCAAGTCGTTTCATTCCATGTTCCAAAAACCTTGACAAACTGGAGACTGTAGT
JMSF032H14+           TGCTGTCTCAAGTCGTTTCATTCCATGTTCCAAAAACCTTGACAAACTGGAGACTGTAGT
                      ____________________________________________________________
consensus             TGCTGTCTCAAGTCGTTTCATTCCATGTTCCAAAAACCTTGACAAACTGGAGACTGTAGT
 
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JMSF041G24+           AAGTCTTTTTGTCAAATCCAATGAAGGATCCATTTTCGCAAGAAGAAGCGTAAGCCCATG
JMSF049H21+           AAGTCTTTTTGTCAAATCCAATGAAGGATCCATTTTCGCAAGAAGAAGCGTAAGCCCATG
JMSF032H14+           AAGTCTTTTTGTCAAATCCAATGAAGGATCCATTTTCGCAAGAAGAAGCGTAAGCCCATG
                      ____________________________________________________________
consensus             AAGTCTTTTTGTCAAATCCAATGAAGGATCCATTTTCGCAAGAAGAAGCGTAAGCCCATG
 
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JMSF041G24+           ATGATTTGGTCTTGCGGAGGTTGTTCTTCTACAGAGAGGGCCGATGCAATGAGTGGAGAA
JMSF049H21+           ATGATTTGGTCTTGCGGAGGTTGTTCTTCTACAGAGAGGGCCGATGCAATGAGTGGAGAA
JMSF032H14+           ATGATTTGGTCTTGCGGAGGTTGTTCTTCTACAGAGAGGGCCGATGCAATGAGTGGAGAA
                      ____________________________________________________________
consensus             ATGATTTGGTCTTGCGGAGGTTGTTCTTCTACAGAGAGGGCCGATGCAATGAGTGGAGAA
 
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JMSF041G24+           AAAGGCGCGTTTTTGGAGAGAAGGCGAGAAGGAGACTCTGAGAAGAGCTGCGTTGTGAGA
JMSF049H21+           AAAGGCGCGTTTTTGGAGAGAAGGCGAGAAGGAGACTCTGAGAAGAGCTGCGTTGTGAGA
JMSF032H14+           AAAGGCGCGTTTTTGGAGAGAAGGCGAGAAGGAGACTCTGAGAAGAGCTGCGTTGTGAGA
                      ____________________________________________________________
consensus             AAAGGCGCGTTTTTGGAGAGAAGGCGAGAAGGAGACTCTGAGAAGAGCTGCGTTGTGAGA
 
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JMSF041G24+           GATGAAGGAACAGACTGAAGGGTGCGCCATGGAAGAAGAGAGTGGTCGGTAGTTGCTAGG
JMSF049H21+           GATGAAGGAACAGACTGAAGGGTGCGCCATGGAAGAAGAGAGTGGTCGGTAGTTGCTAGG
JMSF032H14+           GATGAAGGAACAGACTGAAGGGTGCGCCATGGAAGAAGAGAGTGGTCGGTAGTTGCTAGG
                      ____________________________________________________________
consensus             GATGAAGGAACAGACTGAAGGGTGCGCCATGGAAGAAGAGAGTGGTCGGTAGTTGCTAGG
 
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JMSF041G24+           ATTTTGACGCGCCTC                                             
JMSF049H21+           ATTTTGACGCGCCTCATCCAAACTC                                   
JMSF032H14+           ATTTTGACGCGCCTCATCCAAACTCTATCCTTTCTCGCGCATTTTATTTTTATACGCATC
                      ____________________________________________________________
consensus             ATTTTGACGCGCCTCATCCAAACTCTATCCTTTCTCGCGCATTTTATTTTTATACGCATC