Contig 005174:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020K21Sequence548005174 (9)ref|XP_004248072.1|5e-104PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP689005174 (9)ref|XP_004248072.1|3e-103PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP
JMFF046F18Sequence505005174 (9)gb|KJB39134.1|2e-84hypothetical protein B456_007G025200, partial [Gossypium raimondii]471005174 (9)emb|CDP04038.1|1e-62unnamed protein product [Coffea canephora]
JMFN025P01Sequence623005174 (9)gb|KJB39134.1|2e-103hypothetical protein B456_007G025200, partial [Gossypium raimondii]
JMSF025F09Sequence681005174 (9)ref|XP_004248072.1|3e-103PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP692005174 (9)ref|XP_004248072.1|3e-103PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP
JMSF032E12Sequence621005174 (9)ref|XP_004248072.1|1e-103PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP682005174 (9)ref|XP_004248072.1|3e-103PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum] ref|XP

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF046F18- ATTAATAATATAAATAAACATTTCTTGTTTTCCACAAATA
rJMSF025F09- CAAATA
JMSF025F09+ TTTCCACAAATA
rJMFF020K21- CAAATA
rJMSF032E12- CAAATA
                      ____________________________________________________________
consensus ATTAATAATATAAATAAACATTTCTTGTTTTCCACAAATA
 
. : . : . : . : . : . :
rJMFF046F18- TTAGTCTAAACACAAGAAATTAAGAGCACAAATTTCTTTTGAAAGGTAATATTTCGCACT
rJMSF025F09- TTAGTCTAAACACAAGAAATTAAGAGCACAAATTTCTTTTGAAAGGTAATATTTCGCACT
JMSF025F09+ TTAGTCTAAACACAAGAAATTAAGAGCACAAATTTCTTTTGAAAGGTAATATTTCGCACT
JMFN025P01+ AAGAAATTAAGAGCACAAATTTCTTTGNAAAGGTAATATTTCGCACT
rJMFF020K21- TTAGTCTAAACACAAGAAATTAAGAGCACAAATTTCTTTTGAAAGGTAATATTTCGCACT
rJMSF032E12- TTAGTCTAAACACAAGAAATTAAGAGCACAAATTTCTTTTGAAAGGTAATATTTCGCACT
JMSF032E12+ TGAAAGGTAATATTTCGCACT
                      ____________________________________________________________
consensus TTAGTCTAAACACAAGAAATTAAGAGCACAAATTTCTTTTGAAAGGTAATATTTCGCACT
 
. : . : . : . : . : . :
rJMFF046F18- ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
rJMSF025F09- ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
JMSF025F09+ ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
JMFN025P01+ ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
rJMFF020K21- ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
JMFF020K21+ TATACAAAT
rJMSF032E12- ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
JMSF032E12+ ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
                      ____________________________________________________________
consensus ATTCTACACTTCTTCATTGCAATGGCTGATAGGACAGACAAATTTTATCTTTATACAAAT
 
. : . : . : . : . : . :
rJMFF046F18- TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
rJMSF025F09- TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
JMSF025F09+ TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
JMFN025P01+ TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
rJMFF020K21- TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
JMFF020K21+ TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
rJMSF032E12- TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
JMSF032E12+ TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
                      ____________________________________________________________
consensus TCAAACACACAATGGTCATTTTTAACCCATTGCATACTTTTGGGTCCAGCTCCTGGCAGT
 
. : . : . : . : . : . :
rJMFF046F18- TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
rJMSF025F09- TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
JMSF025F09+ TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
JMFN025P01+ TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
rJMFF020K21- TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
JMFF046F18+ TTCATACTTAGCCCCGTCTGTCTTGTACATAT-GGCAATCTCCGGAACCAAGGGATC
JMFF020K21+ TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
rJMSF032E12- TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
JMSF032E12+ TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
                      ____________________________________________________________
consensus TGCTTCATACTTAGCCCTGTCTGTCTTGTACATATGGGCAATCTCCGGAACCAAGGGATC
 
. : . : . : . : . : . :
rJMFF046F18- ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
rJMSF025F09- ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
JMSF025F09+ ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
JMFN025P01+ ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
rJMFF020K21- ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
JMFF046F18+ ATCAGGGTTNGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
JMFF020K21+ ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
rJMSF032E12- ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
JMSF032E12+ ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
                      ____________________________________________________________
consensus ATCAGGGTTTGGATCAGTTAGAAGTGAGCAGATTGAAAGCAAAACCTTGGAAATAGTCAA
 
. : . : . : . : . : . :
rJMFF046F18- GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
rJMSF025F09- GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
JMSF025F09+ GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
JMFN025P01+ GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
rJMFF020K21- GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
JMFF046F18+ GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
JMFF020K21+ GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
rJMSF032E12- GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
JMSF032E12+ GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
                      ____________________________________________________________
consensus GGCAGGGCTCCATTGCTCCTTCAAGATGTCAAGGCAGATGCTACCATTGCTATTGATATT
 
. : . : . : . : . : . :
rJMFF046F18- GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
rJMSF025F09- GGGATGAAAAACCTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
JMSF025F09+ GGGATGAAAAACCTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
JMFN025P01+ GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
rJMFF020K21- GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
JMFF046F18+ GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
JMFF020K21+ GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
rJMSF032E12- GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
JMSF032E12+ GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
                      ____________________________________________________________
consensus GGGATGAAAAACTTTTGTTCTAAAAGCCACCTTTGGAGGTTTGAAAGGATAATCAGGGGG
 
. : . : . : . : . : . :
rJMFF046F18- GAAATGAATAG
rJMSF025F09- GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
JMSF025F09+ GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
JMFN025P01+ GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
rJMFF020K21- GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
JMFF046F18+ GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
JMFF020K21+ GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
rJMSF032E12- GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
JMSF032E12+ GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
                      ____________________________________________________________
consensus GAAATGAATAGTGACCAAAAACACACCCCCTGCATAAGGACTATCTGGGGGACCCATTAT
 
. : . : . : . : . : . :
rJMSF025F09- GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
JMSF025F09+ GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
JMFN025P01+ GGTAGCTTGCCAATGAAACATGTCTTCACCAATAGGTCCAGCGCTGCAAGAGGTAGGAGG
rJMFF020K21- GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
JMFF046F18+ GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
JMFF020K21+ GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
rJMSF032E12- GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
JMSF032E12+ GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
                      ____________________________________________________________
consensus GGTAGCTTGCCAATGAAACATGTCTTCACCAACAGGTCCAGCGCTGCAAGAGGTAGGAGG
 
. : . : . : . : . : . :
rJMSF025F09- ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
JMSF025F09+ ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
JMFN025P01+ ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
rJMFF020K21- ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
JMFF046F18+ ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCAT
JMFF020K21+ ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
rJMSF032E12- ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
JMSF032E12+ ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
                      ____________________________________________________________
consensus ATCTTTCTGGAGATCCTTGAGCTCCTTCAAGATTCGTTTCGAAGCCATAGCTCAAAACAA
 
. : . : . : . : . : . :
rJMSF025F09- CCTGA
JMSF025F09+ CCTGA
JMFN025P01+ CCTGATAAGAGATTCGAGATTGGAAGCTATTTGCCG
rJMFF020K21- CCTGA
JMFF020K21+ CCTGATAAGAGATTCGAGATTGGAAGCTATTTGCCGATTTGTTGTTTTCTTCTTTCCTT
rJMSF032E12- CCTGATAAGAGATTCGAGATTGGAAGCTATTTGCCGATTTGTTGTTTTCTTCTTTCCTT
JMSF032E12+ CCTGATAAGAGATTCGAGATTGGAAGCTATTTGCCGATTTGTTGTTTTCTTCTTTCCTTC
                      ____________________________________________________________
consensus CCTGATAAGAGATTCGAGATTGGAAGCTATTTGCCGATTTGTTGTTTTCTTCTTTCCTTC