Contig 005171:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF032A14Sequence532005171 (2)ref|XP_006342867.1|2e-38PREDICTED: ATP synthase subunit epsilon, mitochondrial-like [Solanum tuberosum]335005171 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF032A14- GGCAGAGGAACAGTTTTCTGAGAGAAGGAAGAAATGGCGTCTACTGCAGCGGT
                      ____________________________________________________________
consensus GGCAGAGGAACAGTTTTCTGAGAGAAGGAAGAAATGGCGTCTACTGCAGCGGT
 
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JMSF032A14- GCCGTTTTGGAGAGCAGCGGGGATGACCTACATTACATACTCCAATTTGTGCGCGAACCT
                      ____________________________________________________________
consensus GCCGTTTTGGAGAGCAGCGGGGATGACCTACATTACATACTCCAATTTGTGCGCGAACCT
 
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JMSF032A14- GGTGAGGAACTGTCTCAAGGAGCCTTACAAGTCCGAAGCTCTGAGCCGTGAGAAGGTTCA
                      ____________________________________________________________
consensus GGTGAGGAACTGTCTCAAGGAGCCTTACAAGTCCGAAGCTCTGAGCCGTGAGAAGGTTCA
 
. : . : . : . : . : . :
rJMSF032A14+ TAAANGGGCCGANGGAAANCCGCNGAAGCCCCCTATCCGCTCAGATAC
JMSF032A14- CTACTCCGTCTCTAAATGGGCCGATGGAAAGCCGCAGAAGCCCACTATCCGCTCAGATAC
                      ____________________________________________________________
consensus CTACTCCGTCTCTAAATGGGCCGATGGAAAGCCGCAGAAGCCCCCTATCCGCTCAGATAC
 
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rJMSF032A14+ TTTTGAAGAATAANGTTGATCTTGGGCTNTGATGATCTGTTGATAAATTAGCNAGTTTTG
JMSF032A14- TTCTGAAGAATAATGTTGATCTTGGGCTCTGATGATCTGTTGATAAATTAGCAAGTTTTG
                      ____________________________________________________________
consensus TTTTGAAGAATAATGTTGATCTTGGGCTCTGATGATCTGTTGATAAATTAGCAAGTTTTG
 
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rJMSF032A14+ AATGTTGAGTTTTGTACTCCCNAANGTNTTCCNGAATGCTACNGNGGGCCCNAAATATTG
JMSF032A14- AATGTTGAGTTTTGTACTCCCAAATGTCTTCCAGAATGCTACTGTGGGCACAAAATATTG
                      ____________________________________________________________
consensus AATGTTGAGTTTTGTACTCCCAAATGTCTTCCAGAATGCTACTGTGGGCCCAAAATATTG
 
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rJMSF032A14+ TTGGTCNATGANGTAGAAGCTGAATGATNTTCAACCTGTTAGACNCNTGCGATGATATTA
JMSF032A14- TTGGTCAATGATGTAGAAGCTGAATGATCTTCAACATGTTAGACACGTGCGATGATATTA
                      ____________________________________________________________
consensus TTGGTCAATGATGTAGAAGCTGAATGATCTTCAACCTGTTAGACACGTGCGATGATATTA
 
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rJMSF032A14+ CCCTGNGGGANTTTTTTTGNTTTTTTTTTTGTTTTTAATTTTATTTTTATTTTTGGTTTG
JMSF032A14- CCTTGTGGGATTTTTTTTGTTTTTTTTTTTGTTTTNAATTTTATTTTTATTTTNGGTTTG
                      ____________________________________________________________
consensus CCTTGTGGGATTTTTTTTGTTTTTTTTTTTGTTTTTAATTTTATTTTTATTTTTGGTTTG
 
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rJMSF032A14+ AAACCGGGATTAATTATAGTTTTGTTTTGTTTCATTAA
JMSF032A14- AAA-CGGGATTAATTANAGTTTTGTTTTGTTTCATTAANGTANCCAAACTTGATAACNTT
                      ____________________________________________________________
consensus AAACCGGGATTAATTATAGTTTTGTTTTGTTTCATTAANGTANCCAAACTTGATAACNTT