Contig 005159:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007E09Sequence564005159 (3)ref|XP_004238228.1|9e-34PREDICTED: protein BRASSINAZOLE-RESISTANT 1 [Solanum lycopersicum]740014809ref|XP_004238228.1|9e-70PREDICTED: protein BRASSINAZOLE-RESISTANT 1 [Solanum lycopersicum]
JMSF030K21Sequence656005159 (3)ref|XP_009767052.1|1e-57PREDICTED: protein BRASSINAZOLE-RESISTANT 1-like [Nicotiana sylvestris]672014077 (2)ref|XP_009594614.1|1e-84PREDICTED: protein BRASSINAZOLE-RESISTANT 1 [Nicotiana tomentosiformis]
JMSF041P18Sequence766005159 (3)ref|XP_009767052.1|8e-82PREDICTED: protein BRASSINAZOLE-RESISTANT 1-like [Nicotiana sylvestris]743014077 (2)ref|XP_009594614.1|5e-84PREDICTED: protein BRASSINAZOLE-RESISTANT 1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+               AAGAGATGTTGAAGGCTGACATTGAATCTTTGGCCAAAGTTTCCAGATTGAAAGTC
                      ____________________________________________________________
consensus                 AAGAGATGTTGAAGGCTGACATTGAATCTTTGGCCAAAGTTTCCAGATTGAAAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+           TGCTTGAGAACCCTGGTTGGGGAAGAAAGCGGTGGGGTTACAGGGGCACTGTTCGATATC
                      ____________________________________________________________
consensus             TGCTTGAGAACCCTGGTTGGGGAAGAAAGCGGTGGGGTTACAGGGGCACTGTTCGATATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+           CTTAGGGCAGGTAGTGACGAAGGAATGCTGTTATGGAGAAATACAAATGGATGTGGAGAA
                      ____________________________________________________________
consensus             CTTAGGGCAGGTAGTGACGAAGGAATGCTGTTATGGAGAAATACAAATGGATGTGGAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+           ATATTGGCATCGCCTCGTGTTGGACTGGGACATGCCGAGGATAATGGACTAGCTTGGTAA
JMSF030K21+                                                  GATAATGGACTAGCTTGGTAA
                      ____________________________________________________________
consensus             ATATTGGCATCGCCTCGTGTTGGACTGGGACATGCCGAGGATAATGGACTAGCTTGGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+           GATGGAATTGGACTAGCAAAGTAGGAAGAAGGAGGGCTTGGATTGCGCGACGAGCTTGGG
JMSF030K21+           GATGGAATTGGACTAGCAAAGTAGGAAGATGGAGGGCTTGGATTGCGCGACGAGCTTGGG
                      ____________________________________________________________
consensus             GATGGAATTGGACTAGCAAAGTAGGAAGATGGAGGGCTTGGATTGCGCGACGAGCTTGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+           GTGATGTTCGCTGAAGTGCCTCCAATCTCCATTGGGATTGGCTTGCATCCCTTGCGATAA
JMFF007E09+                      TGAAGTTCCTCCAATCTCCATCGGAGTTGGCTTGCATCCCTTGCGATAA
JMSF030K21+           GTGATGTTCGCTGAAGTGCCTCCAATCTCCATTGGGATTGGCTTGCATCCCTTGCGATAA
                      ____________________________________________________________
consensus             GTGATGTTCGCTGAAGTGCCTCCAATCTCCATTGGGATTGGCTTGCATCCCTTGCGATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+           GTGGTGCCATCGGGCTCGACGATCCAGCCAGCTTCAGTACAGAGAGCCTTGAGGACCTCG
JMFF007E09+           GTGGTGCCGTCGGGCTCGACGGTCCAGCCAGCTTCATGACAGAGAGCCTTGAGAACCTCG
JMSF030K21+           GTGGTGCCATCGGGCTCGACGATCCAGCCAGCTTCAGTACAGAGAGCCTTGAGGACCTCG
                      ____________________________________________________________
consensus             GTGGTGCCATCGGGCTCGACGATCCAGCCAGCTTCAGTACAGAGAGCCTTGAGGACCTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+           TTGTTATCACAGTGCTTGGGAAGATTATAGTTCCCCTGAGCTCTCAGACCCGTATATATC
JMFF007E09+           TTGTTGTCGCAGTGCTTAGGGAGATTGTAGTTCCCCTGAGCTCTCAGCCCGGAATATATC
JMSF030K21+           TTGTTATCACAGTGCTTGGGAAGATTATAGTTCCCCTGAGCTCTCAGACCCGTATATATC
                      ____________________________________________________________
consensus             TTGTTATCACAGTGCTTGGGAAGATTATAGTTCCCCTGAGCTCTCAGACCCGTATATATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+           TTCGCAGCTATGGCTCTCCTCCTCCTCTCTCTCCGCCGGTTGTTCTCTCTCTCCCTCCAC
JMFF007E09+           TTAGCAGCTATGGCTCTCCTCCTCCGCTCTCTTCTCCGGTTATTCTCCCTCTCCCTCCAC
JMSF030K21+           TTCGCAGCTATGGCTCTCCTCCTCCTCTCTCTCCGCCGGTTGTTCTCTCTCTCCCTCCAC
                      ____________________________________________________________
consensus             TTCGCAGCTATGGCTCTCCTCCTCCTCTCTCTCCGCCGGTTGTTCTCTCTCTCCCTCCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+           GACGGCTTCCTCCTCCCGCTACTACTACCCCCAACGCCACCCTCGCCGCCGCCTCCCGAC
JMFF007E09+           GACGGCTTCCTCCTCCC                                           
JMSF030K21+           GACGGCTTCCTCCTCCCGCTACTACTACCCCCAACGCCACCCTCGCCGCCGCCTCCCGAC
                      ____________________________________________________________
consensus             GACGGCTTCCTCCTCCCGCTACTACTACCCCCAACGCCACCCTCGCCGCCGCCTCCCGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+           AACGATGCCGCTGATCCTCCGGCTTCCCACATCATTTCCCTATCTCTCTCTATCTGGATG
JMSF030K21+           AACGATGCCGCTGATCCTCCGGCTTCCCACATCATTTCCCTATCTCTCTCTATCTGGATG
                      ____________________________________________________________
consensus             AACGATGCCGCTGATCCTCCGGCTTCCCACATCATTTCCCTATCTCTCTCTATCTGGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+           AATAGTACAGAGAGAAGAGAAGCGTATATGGCGTTTCAGAGTGCTCACGAGGAACACGAT
JMSF030K21+           AATAGTACAGAGAGAAGAGAAGCGTATATGGCGTTTCAGAGTGCTCACGAGGAACACGAT
                      ____________________________________________________________
consensus             AATAGTACAGAGAGAAGAGAAGCGTATATGGCGTTTCAGAGTGCTCACGAGGAACACGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041P18+           CTCACAGCCTCTGCTTTCTGGTATTAGAAGAATCTCTCAGTTTCTTACT           
JMSF030K21+           CTCACAGCCTCTGCTTTCTGGTATTAGAAGAATCTCTCAGTTTCTTACTACGGAGTACTC
                      ____________________________________________________________
consensus             CTCACAGCCTCTGCTTTCTGGTATTAGAAGAATCTCTCAGTTTCTTACTACGGAGTACTC