Contig 005157:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030J08Sequence642005157 (2)ref|XP_010260154.1|2e-98PREDICTED: 60S ribosomal protein L4 [Nelumbo nucifera]
JMSF030K08Sequence638005157 (2)ref|XP_010260154.1|1e-96PREDICTED: 60S ribosomal protein L4 [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF030K08+ AGCGTCAGGATAAGCTCCGATCTGCTTTAGAGCCTTGA
JMSF030J08+ TCTCAGCGTCAGGATAAGCTCCGATCTGCTTTAGAGCCTTGA
                      ____________________________________________________________
consensus TCTCAGCGTCAGGATAAGCTCCGATCTGCTTTAGAGCCTTGA
 
. : . : . : . : . : . :
JMSF030K08+ TGGCATTCGAGGTCTTCTCAATGCCNTCAGCAGAATCCGAAACAACGAGCGGAATCTCCG
JMSF030J08+ TGGCATTCGAGGTCTTCTCAATGCCCTCAGCAGAATCCGAAACAACGAGCGGAATCTCCG
                      ____________________________________________________________
consensus TGGCATTCGAGGTCTTCTCAATGCCCTCAGCAGAATCCGAAACAACGAGCGGAATCTCCG
 
. : . : . : . : . : . :
JMSF030K08+ GCACGGATTCCACGCGATGTCCTCGTGCAAGCACGAGCGACGGAACAGCCGAGGCGGCAA
JMSF030J08+ GCACGGATTCCACGCGATGTCCTCGTGCAAGCACGAGCGACGGAACAGCCGAGGCGGCAA
                      ____________________________________________________________
consensus GCACGGATTCCACGCGATGTCCTCGTGCAAGCACGAGCGACGGAACAGCCGAGGCGGCAA
 
. : . : . : . : . : . :
JMSF030K08+ TGGCGGAAACAACCGCATAGCGTTTCTGGTTGACCGGTATCTTCCGGTGCCAGCGGCGCC
JMSF030J08+ TGGCGGAAACAACCGCATAGCGTTTCTGGTTGACCGGTATCTTCCGGTGCCAGCGGCGCC
                      ____________________________________________________________
consensus TGGCGGAAACAACCGCATAGCGTTTCTGGTTGACCGGTATCTTCCGGTGCCAGCGGCGCC
 
. : . : . : . : . : . :
JMSF030K08+ AGATTTTGGTCGGAGCGAACATGCGACCACCGCGGCACATATTCCCGAAAGCACCCTGCC
JMSF030J08+ AGATTTTGGTCGGAGCGAACATGCGACCACCGCGGCACATATTCCCGAAAGCACCCTGCC
                      ____________________________________________________________
consensus AGATTTTGGTCGGAGCGAACATGCGACCACCGCGGCACATATTCCCGAAAGCACCCTGCC
 
. : . : . : . : . : . :
JMSF030K08+ CTGCGCGGTGCGTACCACCTCCCGGCACACGGGGGATACGAGACACAGCACGGCCAGTCC
JMSF030J08+ CTGCGCGGTGCGTACCACCTCCCGGCACACGGGGGATACGAGACACAGCACGGCCAGTCC
                      ____________________________________________________________
consensus CTGCGCGGTGCGTACCACCTCCCGGCACACGGGGGATACGAGACACAGCACGGCCAGTCC
 
. : . : . : . : . : . :
JMSF030K08+ CCCATGACTCGGCGGAGGTCTGATGACCAGCGCGCTTCGATACAGCATAAGGCTGGCGGG
JMSF030J08+ CCCATGACTCGGCGGAGGTCTGATGACCAGCGCGCTTCGATACAGCATAAGGCTGGCGGG
                      ____________________________________________________________
consensus CCCATGACTCGGCGGAGGTCTGATGACCAGCGCGCTTCGATACAGCATAAGGCTGGCGGG
 
. : . : . : . : . : . :
JMSF030K08+ AATTCCTGGAGATATTGGAATGGACGAAGGTCACCACGTCAGGTCGGATCGGAGCCTTCA
JMSF030J08+ AATTCCTGGAGATATTGGAATGGACGAAGGTCACCACGTCAGGTCGGATCGGAGCCTTCA
                      ____________________________________________________________
consensus AATTCCTGGAGATATTGGAATGGACGAAGGTCACCACGTCAGGTCGGATCGGAGCCTTCA
 
. : . : . : . : . : . :
JMSF030K08+ TGACTCCCGGCAGAGGGAGGCAATCAGCGGCGGAGCCTCCATCCGTGGCCATATCATTTT
JMSF030J08+ TGACTCCCGGCAGAGGGAGGCAATCAGCGGCGGAGCCTCCATCCGTGGCCATATCATTTT
                      ____________________________________________________________
consensus TGACTCCCGGCAGAGGGAGGCAATCAGCGGCGGAGCCTCCATCCGTGGCCATATCATTTT
 
. : . : . : . : . : . :
JMSF030K08+ CCAAAGCTTGGATGGTAACCAACGGGCGCGCGGCGGCGGTGCTCATTTCCACGGCGGTTC
JMSF030J08+ CCAAAGCTTGGATGGTAACCAACGGGCGCGCGGCGGCGGTGCTCATTTCCACGGCGGTTC
                      ____________________________________________________________
consensus CCAAAGCTTGGATGGTAACCAACGGGCGCGCGGCGGCGGTGCTCATTTCCACGGCGGTTC
 
. : . : . : . : . : . :
JMSF030K08+ TGGAAACCGGCGTCGAAGGAGAAGGGGAAGGAAGCTAGCAGCACTTCACTGCAGGGGTTC
JMSF030J08+ TGGAAACCGGCGTCGAAGGAGAAGGGGAAGGAAGCTAGCAGCACTTCACTGCAGGGGTTC
                      ____________________________________________________________
consensus TGGAAACCGGCGTCGAAGGAGAAGGGGAAGGAAGCTAGCAGCACTTCACTGCAGGGGTTC