Contig 005150:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014F11Sequence594005150 (7)emb|CDH92856.1|2e-86omega-6 fatty acid desaturase, partial [Sesamum radiatum]828001402 (9)gb|ABZ05022.1|9e-125delta-12 fatty acid desaturase [Davidia involucrata]
JMFF033H18Sequence571005150 (7)emb|CDH92856.1|7e-97omega-6 fatty acid desaturase, partial [Sesamum radiatum]728001402 (9)gb|AIC34705.1|2e-99omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid
JMFF049J02Sequence631005150 (7)emb|CDH92856.1|1e-82omega-6 fatty acid desaturase, partial [Sesamum radiatum]582001402 (9)gb|AIC34705.1|1e-74omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid
JMSF016O19Sequence252005150 (7)emb|CDH92856.1|6e-07omega-6 fatty acid desaturase, partial [Sesamum radiatum]755001402 (9)gb|AIC34705.1|2e-116omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid
JMSF030B23Sequence637005150 (7)emb|CDH92856.1|9e-99omega-6 fatty acid desaturase, partial [Sesamum radiatum]730001402 (9)gb|AIC34705.1|2e-100omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid
JMSF042N07Sequence783005150 (7)emb|CDP17521.1|3e-134unnamed protein product [Coffea canephora]692001402 (9)gb|AIC34705.1|6e-101omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid
JMSF048H05Sequence646005150 (7)emb|CDH92856.1|2e-102omega-6 fatty acid desaturase, partial [Sesamum radiatum]692001402 (9)gb|AIC34705.1|6e-101omega-6 fatty acid desaturase [Rhus chinensis] gb|AIC34706.1| omega-6 fatty acid

Alignment

This contig is upended


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JMFF049J02+                                      AGTATTTGGAGAACCAATTGACTTTAGATTTGG
JMFF033H18+                                                  ACCAATTGACTTTAGATTTTG
JMSF030B23+                                  TTCAAGTATTNGGAGAACCAATTGACTTTAGATTTNG
                      ____________________________________________________________
consensus                                    TTCAAGTATTTGGAGAACCAATTGACTTTAGATTTTG
 
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JMSF048H05+           GCTTTGGGACAAAGACTTCATCACGCTCAAGGGAACCCGTGTTGGAATGATGGCGGCGGT
JMSF042N07+           GCTTTGGGACAAAGACTTCATCACGCTCAAGGGAACCCGTGTTGGAATGATGGCGGCGGT
JMFF049J02+           CTTGGGGGACAAAGACTTCATCACGCTCAAGGGAACCCGTGTT-GAATGATGGCGGCGGT
JMFF014F11+                                 ACGCTCAAGGGAACCCGTGTTGGAATGATGGCGGCGGT
JMFF033H18+           GCTTTGGGACAAAGACTTCATCACGCTCAAGGGAACCCGTGTTGGAATGATGGCGGCGGT
JMSF030B23+           GCTTTGGGACAAAGACTTCATCACGCTCAAGGGAACCCGTGTTGGAATGATGGCGGCGGT
                      ____________________________________________________________
consensus             GCTTTGGGACAAAGACTTCATCACGCTCAAGGGAACCCGTGTTGGAATGATGGCGGCGGT
 
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JMSF048H05+           GACTATATTTCCATGAGAAGTAGGGTACGAAAAGGGCAGAGTGAAGGATAAGGCCAACAG
JMSF042N07+           GACTATATTTCCATGAGAAGTAGGGTACGAAAAGGGCAGAGTGAAGGATAAGGCCAACAG
JMFF049J02+           GACTATATTTCCATGAGAAGTAGGGTACGAAAAGGGCAGAGTGAAGGATAAGGCCAACAG
JMFF014F11+           GACTATATTTCCATGAGAAGTAGGGTACGAAAAGGGCAGAGTGAAGGATAAGGCCAACAG
JMFF033H18+           GACTATATTTCCATGAGAAGTAGGGTACGAAAAGGGCAGAGTGAAGGATAAGGCCAACAG
JMSF030B23+           GACTATATTTCCATGAGAAGTAGGGTACGAAAAGGGCAGAGTGAAGGATAAGGCCAACAG
                      ____________________________________________________________
consensus             GACTATATTTCCATGAGAAGTAGGGTACGAAAAGGGCAGAGTGAAGGATAAGGCCAACAG
 
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JMSF048H05+           TATCATCCACCCATTGGTAATCACTAAAAGCATGGTGGCCACATTCATGGGCTATAACCC
JMSF042N07+           TATCATCCACCCATTGGTAATCACTAAAAGCATGGTGGCCACATTCATGGGCTATAACCC
JMFF049J02+           TATCATCCACCCATTGGTAATCACTAAAAGCATGGTGGCCACATTCATGGGCTATAACCC
JMFF014F11+           TATCATCCACCCATTGGTAATCACTAAAAGCATGGTGGCCACATTCATGGGCTATAACCC
JMFF033H18+           TATCATCCACCCATTGGTAATCACTAAAAGCATGGTGGCCACATTCATGGGCTATAACCC
JMSF030B23+           TATCATCCACCCATTGGTAATCACTAAAAGCATGGTGGCCACATTCATGGGCTATAACCC
                      ____________________________________________________________
consensus             TATCATCCACCCATTGGTAATCACTAAAAGCATGGTGGCCACATTCATGGGCTATAACCC
 
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JMSF048H05+           AGATCCCAGTGCAGACACAACCTTGAAGAGCCCAATAAATAGGCCATGCAAGGTATTGAT
JMSF042N07+           AGATCCCAGTGCAGACACAACCTTGAAGAGCCCAATAAATAGGCCATGCAAGGTATTGAT
JMFF049J02+           AGATCCCAGTGCAGACACAACCTTGAAGAGCCCAATAAATAGGCCATGCAAGGTATTGAT
JMFF014F11+           AGATCCCAGTGCAGACACAACCTTGAAGAGCCCAATAAATAGGCCATGCAAGGTATTGAT
JMFF033H18+           AGATCCCAGTGCAGACACAACCTTGAAGAGCCCAATAAATAGGCCATGCAAGGTATTGAT
JMSF030B23+           AGATCCCAGTGCAGACACAACCTTGAAGAGCCCAATAAATAGGCCATGCAAGGTATTGAT
                      ____________________________________________________________
consensus             AGATCCCAGTGCAGACACAACCTTGAAGAGCCCAATAAATAGGCCATGCAAGGTATTGAT
 
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JMSF048H05+           AAGTAGATGGAAGCAAATGGATATAATTGGTGGCTATGTAGTAGAAAAGAGCAACGAAGA
JMSF042N07+           AAGTAGATGGAAGCAAATGGATATAATTGGTGGCTATGTAGTAGAAAAGAGCAACGAAGA
JMFF049J02+           AAGTAGATGGAAGCAAATGGATATAATTGGTGGCTATGTAGTAGAAAAGAGCAACGAAGA
JMFF014F11+           AAGTAGATGGAAGCAAATGGATATAATTGGTGGCTATGTAGTAGAAAAGAGCAACGAAGA
JMFF033H18+           AAGTAGATGGAAGCAAATGGATATAATTGGTGGCTATGTAGTAGAAAAGAGCAACGAAGA
JMSF030B23+           AAGTAGATGGAAGCAAATGGATATAATTGGTGGCTATGTAGTAGAAAAGAGCAACGAAGA
                      ____________________________________________________________
consensus             AAGTAGATGGAAGCAAATGGATATAATTGGTGGCTATGTAGTAGAAAAGAGCAACGAAGA
 
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JMSF048H05+           ACAAGTCATACACAACATATGAGAATGACCGAATAAGCGATCGCTCAAAGCAATGAGGAG
JMSF042N07+           ACAAGTCATACACAACATATGAGAATGACCGAATAAGCGATCGCTCAAAGCAATGAGGAG
JMFF049J02+           ACAAGTCATACACAACATATGAGAATGACCGAATAAGCGATCGCTCAAAGCAATGAGGAG
JMFF014F11+           ACAAGTCATACACAACATATGAGAATGACCGAATAAGCGATCGCTCAAAGCAATGAGGAG
JMFF033H18+           ACAAGTCATACACAACATATGAGAATGACCGAATAAGCGATCGCTCAAAGCAATGAGGAG
JMSF030B23+           ACAAGTCATACACAACATATGAGAATGACCGAATAAGCGATCGCTCAAAGCAATGAGGAG
                      ____________________________________________________________
consensus             ACAAGTCATACACAACATATGAGAATGACCGAATAAGCGATCGCTCAAAGCAATGAGGAG
 
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JMSF048H05+           GGATGGCCTTCTTGATATCACTTAGGGAGAATTTAGGCTTAGTATATGGAACCCTTTCAA
JMSF042N07+           GGATGGCCTTCTTGATATCACTTAGGGAGAATTTAGGCTTAGTATATGGAACCCTTTCAA
JMFF049J02+           GGATGGCCTTCTTGATATCACTTAGGGAGAATTTAGGCTTAGTATATGGAACCCTTTCAA
JMFF014F11+           GGATGGCCTTCTTGATATCACTTAGGGAGAATTTAGGCTTAGTATATGGAACCCTTTCAA
JMSF016O19+                  CTTCTTGATATCACTTAGGGAGAATTTAGGCTTAGTATATGGAACCCTTTCAA
JMFF033H18+           GGATGGCCTTCTTGATATCACTTAGGGAGAATTTAGGCTTAGTATATGGAACCCTTTCAA
JMSF030B23+           GGATGGCCTTCTTGATATCACTTAGGGAGAATTTAGGCTTAGTATATGGAACCCTTTCAA
                      ____________________________________________________________
consensus             GGATGGCCTTCTTGATATCACTTAGGGAGAATTTAGGCTTAGTATATGGAACCCTTTCAA
 
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JMSF048H05+           GTGGGTTCTTCTTAAAACCAGATTCAGTTGAAGATGAAATTCGGCCACCAGCACCCATGG
JMSF042N07+           GTGGGTTCTTCTTAAAACCAGATTCAGTTGAAGATGAAATTCGGCCACCAGCACCCATGG
JMFF049J02+           GTGGGTTCTTCTTAAAACCAGATTCAGTTGAAGATGAAATTCGGCCACCAGCACCCATGG
JMFF014F11+           GTGGGTTCTTCTTAAAACCAGATTCAGTTGAAGATGAAATCCGGCCACCAGCACCCATGG
JMSF016O19+           GTGGGTTCTTCTTAAAACCAGATTCAGTTGAAGATGAAATTCGGCCACCAGCACCCATGG
JMFF033H18+           GTGGGTTCTTCTTAAAACCAGATTCAGTTGAAGATGAAATTCGGCCACCAGCACCCATGG
JMSF030B23+           GTGGGTTCTTCTTAAAACCAGATTCAGTTGAAGATGAAATTCGGCCACCAGCACCCATGG
                      ____________________________________________________________
consensus             GTGGGTTCTTCTTAAAACCAGATTCAGTTGAAGATGAAATTCGGCCACCAGCACCCATGG
 
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JMSF048H05+           CTCTCTACACCTTCAAATCCCAAGCCTCCAGATTATGCAGAGCTGCGCTCTCGGCTTCCT
JMSF042N07+           CTCTCTACACCTTCAAATCCCAAGCCTCCAGATTATGCAGAGCTGCGCTCTCGGCTTCCT
JMFF049J02+           CTCTCTACACCTTCAAATCCCAAGCCTCCAGATTATGCAGAGCTGCGCTCTCGGCTTCCT
JMFF014F11+           CTCTCTACACCTTCAAATCCCAAGCCT                                 
JMSF016O19+           CTCTCTACACCTTCAAATCCCAAGCCT                                 
JMFF033H18+           CTCTCTACACCTTCAAATCCCAAGCCTCCAGATTATGCAGAGCTGCGCTCTCGGCTTCCT
JMSF030B23+           CTCTCTACACCTTCAAATCCCAAGCCTCCAGATTATGCAGAGCTGCGCTCTCGGCTTCCT
                      ____________________________________________________________
consensus             CTCTCTACACCTTCAAATCCCAAGCCTCCAGATTATGCAGAGCTGCGCTCTCGGCTTCCT
 
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JMSF048H05+           CCCAAAAAGCGCTCTCTGTTCTCTCTCTCTCTCTCTCTTTCACAGTTTTGAGAGTGAAC 
JMSF042N07+           CCCAAAAAGCGCTCTCTGTTCTCTCTCTCTCTCTCTCTTTCACAGTTTTGAGAGTGAAC 
JMFF049J02+           CCCAAAAAGCGCTCTCTGTTCTCTCTCTCTCTCTCTCTTTCACAGTTTTGAGAGTGAAC 
JMFF033H18+           CCCAAAAAGC                                                  
JMSF030B23+           CCCAAAAAGCGCTCTCTGTTCTCTCTCTCTCTCTCTCTTTCACAGTTTTGAGAGTGAACC
                      ____________________________________________________________
consensus             CCCAAAAAGCGCTCTCTGTTCTCTCTCTCTCTCTCTCTTTCACAGTTTTGAGAGTGAACC