Contig 005146:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015O01Sequence577005146 (3)ref|XP_009615186.1|9e-52PREDICTED: Golgi to ER traffic protein 4 homolog isoform X2 [Nicotiana tomentos
JMFF022A05Sequence532005146 (3)ref|XP_009631192.1|1e-40PREDICTED: Golgi to ER traffic protein 4 homolog isoform X8 [Nicotiana tomentos691005409 (2)emb|CDP19077.1|1e-82unnamed protein product [Coffea canephora]
JMSF029N14Sequence648005146 (3)ref|XP_009615186.1|9e-55PREDICTED: Golgi to ER traffic protein 4 homolog isoform X2 [Nicotiana tomentos752005409 (2)emb|CDP19077.1|2e-97unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF015O01+ TTCTAGGAAACTTC
JMSF029N14+ TCATCAGCTAGCTCCAAATTTTGTGGCACTGTAATTCTAGGAAACTTC
                      ____________________________________________________________
consensus TCATCAGCTAGCTCCAAATTTTGTGGCACTGTAATTCTAGGAAACTTC
 
. : . : . : . : . : . :
JMFF022A05+ GTGTCATCATCATAAGAGAAGTTTCCTTTTACA
JMFF015O01+ TTGTAGATTTTCCTTATGCGGTCAAGAGTGTCATCATCATAAGAGAAGTTTCCTTTTACG
JMSF029N14+ TTGTGGATTTTCCTGATGCGGTCAAGAGTGTCATCATCATAAGAGAAGTTTCCTTTTACA
                      ____________________________________________________________
consensus TTGTGGATTTTCCTTATGCGGTCAAGAGTGTCATCATCATAAGAGAAGTTTCCTTTTACA
 
. : . : . : . : . : . :
JMFF022A05+ AGGGTGTCCACAAACAAAACAGCAAGCTCGCCCCCACAGGTAATCTGTTCCATTTCCAAT
JMFF015O01+ AGGGTGTCCACAAACAAAACAGCAAGCTCCCCCCCACAGGTAACCTGTTCATTTTCCAAT
JMSF029N14+ AGGGTGTCCACAAACAAAACAGCAAGCTCGCCCCCACAGGTAATCTGTTCCATTTCCAAT
                      ____________________________________________________________
consensus AGGGTGTCCACAAACAAAACAGCAAGCTCGCCCCCACAGGTAATCTGTTCCATTTCCAAT
 
. : . : . : . : . : . :
JMFF022A05+ TGTGCACAGGCCCCAAACTGAAGAAAATCCAATGCATCAGAAAACCTCTCAGCGCCCACA
JMFF015O01+ TGTGCACAGGCTCCAAACTGAAGAAAATCCAATGCATCAGAAAACCTCTCAGCGCCCACA
JMSF029N14+ TGTGCACAGGCCCCAAACTGAAGAAAATCCAATGCATCAGAAAACCTCTCAGCGCCCACA
                      ____________________________________________________________
consensus TGTGCACAGGCCCCAAACTGAAGAAAATCCAATGCATCAGAAAACCTCTCAGCGCCCACA
 
. : . : . : . : . : . :
JMFF022A05+ TATCTGGCACTAATAGACTTAAACATCTGCTGAGCTCCATAGTAGTTTCCATCTTTCATA
JMFF015O01+ TATCTGGCACTAATAGACTTAAACATCTGCTGAGCTCCATAGTAGTTTCCATCTTTCAGA
JMSF029N14+ TATCTGGCACTAATAGACTTAAACATCTGCTGAGCTCCATAGTAGTTTCCATCTTTCATA
                      ____________________________________________________________
consensus TATCTGGCACTAATAGACTTAAACATCTGCTGAGCTCCATAGTAGTTTCCATCTTTCATA
 
. : . : . : . : . : . :
JMFF022A05+ ACCTTCTCCAACTTGTCAATATTCTCCTGAGCAGGAGGGAGTATGGCTCGCCTGACCCTC
JMFF015O01+ ACCTTCTCCAACTTGTCAATATTCTCCTGAGCAGGAGGGAGTATGGCTCGCCTGACCCTC
JMSF029N14+ ACCTTCTCCAACTTGTCAATATTCTCCTGAGCAGGAGGGAGTATGGCTCGCCTGACCCTC
                      ____________________________________________________________
consensus ACCTTCTCCAACTTGTCAATATTCTCCTGAGCAGGAGGGAGTATGGCTCGCCTGACCCTC
 
. : . : . : . : . : . :
JMFF022A05+ TCTCGCAACATACTTATAGCCCGTCAGTTCACAGCTTCTCACTGGGC
JMFF015O01+ TCTCGCAACATACTTATAGCCTGTCACTTCACAACTTCTCACTGGGC
JMSF029N14+ TCTCGCAACATACTTATAGCCCGTCAGTTCACAGCTTCTCACTGGGCTTGTAGTTGCCGG
                      ____________________________________________________________
consensus TCTCGCAACATACTTATAGCCCGTCAGTTCACAGCTTCTCACTGGGCTTGTAGTTGCCGG
 
. : . : . : . : . : . :
JMSF029N14+ GATTGAGCAGGCGATGGCAGTCCGCAGTCCGGTTGGAGGTCGGTGGTCGACGGTCGGCAA
                      ____________________________________________________________
consensus GATTGAGCAGGCGATGGCAGTCCGCAGTCCGGTTGGAGGTCGGTGGTCGACGGTCGGCAA
 
. : . : . : . : . : . :
JMSF029N14+ TCTCAGCAGTCGACGATCGGCATCTCTACAATCTCGGCTTCTCGCGTCGACAGTTCTCTG
                      ____________________________________________________________
consensus TCTCAGCAGTCGACGATCGGCATCTCTACAATCTCGGCTTCTCGCGTCGACAGTTCTCTG
 
. : . : . : . : . : . :
JMSF029N14+ TTCTCGCCTTCTCGCGTCGCAATAGCCAACAAGGACAGGGACTATAGCTTGATTTAGAAT
                      ____________________________________________________________
consensus TTCTCGCCTTCTCGCGTCGCAATAGCCAACAAGGACAGGGACTATAGCTTGATTTAGAAT
 
. : . : . : . : . : . :
JMSF029N14+ TGAAATTTGCTAGACACCCAGAAGTTGCTTGAAATTTTGGGCTTCCAAATTTCTCTCCTC
                      ____________________________________________________________
consensus TGAAATTTGCTAGACACCCAGAAGTTGCTTGAAATTTTGGGCTTCCAAATTTCTCTCCTC