Contig 005146:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015O01Sequence577005146 (3)ref|XP_009615186.1|9e-52PREDICTED: Golgi to ER traffic protein 4 homolog isoform X2 [Nicotiana tomentos
JMFF022A05Sequence532005146 (3)ref|XP_009631192.1|1e-40PREDICTED: Golgi to ER traffic protein 4 homolog isoform X8 [Nicotiana tomentos691005409 (2)emb|CDP19077.1|1e-82unnamed protein product [Coffea canephora]
JMSF029N14Sequence648005146 (3)ref|XP_009615186.1|9e-55PREDICTED: Golgi to ER traffic protein 4 homolog isoform X2 [Nicotiana tomentos752005409 (2)emb|CDP19077.1|2e-97unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF015O01+                                                         TTCTAGGAAACTTC
JMSF029N14+                       TCATCAGCTAGCTCCAAATTTTGTGGCACTGTAATTCTAGGAAACTTC
                      ____________________________________________________________
consensus                         TCATCAGCTAGCTCCAAATTTTGTGGCACTGTAATTCTAGGAAACTTC
 
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JMFF022A05+                                      GTGTCATCATCATAAGAGAAGTTTCCTTTTACA
JMFF015O01+           TTGTAGATTTTCCTTATGCGGTCAAGAGTGTCATCATCATAAGAGAAGTTTCCTTTTACG
JMSF029N14+           TTGTGGATTTTCCTGATGCGGTCAAGAGTGTCATCATCATAAGAGAAGTTTCCTTTTACA
                      ____________________________________________________________
consensus             TTGTGGATTTTCCTTATGCGGTCAAGAGTGTCATCATCATAAGAGAAGTTTCCTTTTACA
 
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JMFF022A05+           AGGGTGTCCACAAACAAAACAGCAAGCTCGCCCCCACAGGTAATCTGTTCCATTTCCAAT
JMFF015O01+           AGGGTGTCCACAAACAAAACAGCAAGCTCCCCCCCACAGGTAACCTGTTCATTTTCCAAT
JMSF029N14+           AGGGTGTCCACAAACAAAACAGCAAGCTCGCCCCCACAGGTAATCTGTTCCATTTCCAAT
                      ____________________________________________________________
consensus             AGGGTGTCCACAAACAAAACAGCAAGCTCGCCCCCACAGGTAATCTGTTCCATTTCCAAT
 
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JMFF022A05+           TGTGCACAGGCCCCAAACTGAAGAAAATCCAATGCATCAGAAAACCTCTCAGCGCCCACA
JMFF015O01+           TGTGCACAGGCTCCAAACTGAAGAAAATCCAATGCATCAGAAAACCTCTCAGCGCCCACA
JMSF029N14+           TGTGCACAGGCCCCAAACTGAAGAAAATCCAATGCATCAGAAAACCTCTCAGCGCCCACA
                      ____________________________________________________________
consensus             TGTGCACAGGCCCCAAACTGAAGAAAATCCAATGCATCAGAAAACCTCTCAGCGCCCACA
 
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JMFF022A05+           TATCTGGCACTAATAGACTTAAACATCTGCTGAGCTCCATAGTAGTTTCCATCTTTCATA
JMFF015O01+           TATCTGGCACTAATAGACTTAAACATCTGCTGAGCTCCATAGTAGTTTCCATCTTTCAGA
JMSF029N14+           TATCTGGCACTAATAGACTTAAACATCTGCTGAGCTCCATAGTAGTTTCCATCTTTCATA
                      ____________________________________________________________
consensus             TATCTGGCACTAATAGACTTAAACATCTGCTGAGCTCCATAGTAGTTTCCATCTTTCATA
 
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JMFF022A05+           ACCTTCTCCAACTTGTCAATATTCTCCTGAGCAGGAGGGAGTATGGCTCGCCTGACCCTC
JMFF015O01+           ACCTTCTCCAACTTGTCAATATTCTCCTGAGCAGGAGGGAGTATGGCTCGCCTGACCCTC
JMSF029N14+           ACCTTCTCCAACTTGTCAATATTCTCCTGAGCAGGAGGGAGTATGGCTCGCCTGACCCTC
                      ____________________________________________________________
consensus             ACCTTCTCCAACTTGTCAATATTCTCCTGAGCAGGAGGGAGTATGGCTCGCCTGACCCTC
 
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JMFF022A05+           TCTCGCAACATACTTATAGCCCGTCAGTTCACAGCTTCTCACTGGGC             
JMFF015O01+           TCTCGCAACATACTTATAGCCTGTCACTTCACAACTTCTCACTGGGC             
JMSF029N14+           TCTCGCAACATACTTATAGCCCGTCAGTTCACAGCTTCTCACTGGGCTTGTAGTTGCCGG
                      ____________________________________________________________
consensus             TCTCGCAACATACTTATAGCCCGTCAGTTCACAGCTTCTCACTGGGCTTGTAGTTGCCGG
 
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JMSF029N14+           GATTGAGCAGGCGATGGCAGTCCGCAGTCCGGTTGGAGGTCGGTGGTCGACGGTCGGCAA
                      ____________________________________________________________
consensus             GATTGAGCAGGCGATGGCAGTCCGCAGTCCGGTTGGAGGTCGGTGGTCGACGGTCGGCAA
 
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JMSF029N14+           TCTCAGCAGTCGACGATCGGCATCTCTACAATCTCGGCTTCTCGCGTCGACAGTTCTCTG
                      ____________________________________________________________
consensus             TCTCAGCAGTCGACGATCGGCATCTCTACAATCTCGGCTTCTCGCGTCGACAGTTCTCTG
 
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JMSF029N14+           TTCTCGCCTTCTCGCGTCGCAATAGCCAACAAGGACAGGGACTATAGCTTGATTTAGAAT
                      ____________________________________________________________
consensus             TTCTCGCCTTCTCGCGTCGCAATAGCCAACAAGGACAGGGACTATAGCTTGATTTAGAAT
 
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JMSF029N14+           TGAAATTTGCTAGACACCCAGAAGTTGCTTGAAATTTTGGGCTTCCAAATTTCTCTCCTC
                      ____________________________________________________________
consensus             TGAAATTTGCTAGACACCCAGAAGTTGCTTGAAATTTTGGGCTTCCAAATTTCTCTCCTC