Contig 005143:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF029L17-                   TATCCTTTGGTTGNTGTGAGTGTTTCTTTCACAGTATATCAACAGAAATGT
                      ____________________________________________________________
consensus                      TATCCTTTGGTTGNTGTGAGTGTTTCTTTCACAGTATATCAACAGAAATGT
 
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rJMSF029L17-          ATAACTCAGTTACCCAAAAAAGAAAAAAAAAAAATTCNCATAGTTTCNGGTTGATCAAGC
                      ____________________________________________________________
consensus             ATAACTCAGTTACCCAAAAAAGAAAAAAAAAAAATTCNCATAGTTTCNGGTTGATCAAGC
 
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rJMSF029L17-          CATAAACAGNGACTAAAGCCATAACCAGAGAANGATCAACATGAGGTTCCACCATCAAAG
JMSF029L17+                     GACTAAAGCCATAACCAGAGAATGATCAACATGAGGTTCCACCATCAAAG
                      ____________________________________________________________
consensus             CATAAACAGNGACTAAAGCCATAACCAGAGAATGATCAACATGAGGTTCCACCATCAAAG
 
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rJMSF029L17-          TCAATACATCATCTCCAAAAGCAACCCCANATGTTGCCNGCTTTTGTTTTACCTCTGCAA
JMSF029L17+           TCAATACATCATCTCCAAAAGCAACCCCAGATGTTGCCTGCTTTTGTTTTACCTCTGCAA
                      ____________________________________________________________
consensus             TCAATACATCATCTCCAAAAGCAACCCCAGATGTTGCCTGCTTTTGTTTTACCTCTGCAA
 
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rJMSF029L17-          CTAATCTTGATCCACTGACAATCTTGAANGTTGATTTTCCAGGTAAAGCTATGATTTTAT
JMSF029L17+           CTAATCTTGATCCACTGACAATCTTGAATGTTGATTTTCCAGGTAAAGCTATGATTTTAT
                      ____________________________________________________________
consensus             CTAATCTTGATCCACTGACAATCTTGAATGTTGATTTTCCAGGTAAAGCTATGATTTTAT
 
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rJMSF029L17-          AGCAGCTTTCTTCAGGCTGATCACAAGCTAGATTAACACAGTAGNGATTGGAATCCCCTC
JMSF029L17+           AGCAGCTTTCTTCAGGCTGATCACAAGCTAGATTAACACAGTAGTGATTGGAATCCCCTC
                      ____________________________________________________________
consensus             AGCAGCTTTCTTCAGGCTGATCACAAGCTAGATTAACACAGTAGTGATTGGAATCCCCTC
 
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rJMSF029L17-          TGAANACATTCCGGCTTCTCTTAACACGAAAGCACAGAATCTCCTCATCGATCAATTCTG
JMSF029L17+           TGAAGACATTCCGGCTTCTCTTAACACGAAAGCACAGAATCTCCTCATCGATCAATTCTG
                      ____________________________________________________________
consensus             TGAAGACATTCCGGCTTCTCTTAACACGAAAGCACAGAATCTCCTCATCGATCAATTCTG
 
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rJMSF029L17-          NGTTTCCCAATCTGTAGCCATCCCAGCGTCCAAAAACTGCTAATTTCTTTGGCGTATGGA
JMSF029L17+           TGTTTCCCAATCTGTAGCCATCCCAGCGTCCAAAAACTGCTAATTTCTTTGGCGTATGGA
                      ____________________________________________________________
consensus             TGTTTCCCAATCTGTAGCCATCCCAGCGTCCAAAAACTGCTAATTTCTTTGGCGTATGGA
 
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rJMSF029L17-          GAANANAACCCTGCCGNGGANATCCATGANATGAACTTCTCTGCTGCATTTGGNGTTGTA
JMSF029L17+           GAAGAGAACCCTGCCGTGGAGATCCATGAGATGAACTTCTCTGCTGCATTTGGTGTTGTA
                      ____________________________________________________________
consensus             GAAGAGAACCCTGCCGTGGAGATCCATGAGATGAACTTCTCTGCTGCATTTGGTGTTGTA
 
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rJMSF029L17-          GTTGTCAATCCTGTANACTATCTCGCCATTGGAGTCGAAAACCGTGCAGCCATTTCCATG
JMSF029L17+           GTTGTCAATCCTGTAGACTATCTCGCCATTGGAGTCGAAAACCGTGCAGCCATTTCCATG
                      ____________________________________________________________
consensus             GTTGTCAATCCTGTAGACTATCTCGCCATTGGAGTCGAAAACCGTGCAGCCATTTCCATG
 
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rJMSF029L17-          GTACACAAGCGACTTCATCCACACTGTAAACGTCTCCCGCTTTGAAGTCATGTAAGA   
JMSF029L17+           GTACACAAGCGACTTCATCCACACTGTAAACGTCTCCCGCTTTGAAGTCATGTAAGAAGA
                      ____________________________________________________________
consensus             GTACACAAGCGACTTCATCCACACTGTAAACGTCTCCCGCTTTGAAGTCATGTAAGAAGA
 
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JMSF029L17+           AGAAGGAGAAGAAGGAGGTGAAGAGGAAGATGATGAAGAAGATGAAGGGCTCTGAGGATA
                      ____________________________________________________________
consensus             AGAAGGAGAAGAAGGAGGTGAAGAGGAAGATGATGAAGAAGATGAAGGGCTCTGAGGATA
 
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JMSF029L17+           AATTCTAGCCATGGAAATGAAAGGATGGAGAGAGAGAGAGAGAGGTTGAGTTGTTGACTC
                      ____________________________________________________________
consensus             AATTCTAGCCATGGAAATGAAAGGATGGAGAGAGAGAGAGAGAGGTTGAGTTGTTGACTC