| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF028O22 | Sequence | 482 | 005142 (5) | ref|XP_009614324.1| | 1e-32 | PREDICTED: cytochrome b561 and DOMON domain-containing protein At3g25290-like [ | 612 | 005142 (5) | ref|XP_011089023.1| | 1e-23 | PREDICTED: auxin-induced in root cultures protein 12-like [Sesamum indicum] |
| JMSF029L07 | Sequence | 654 | 005142 (5) | ref|XP_011089023.1| | 5e-72 | PREDICTED: auxin-induced in root cultures protein 12-like [Sesamum indicum] | 714 | 005142 (5) | ref|XP_011089023.1| | 6e-50 | PREDICTED: auxin-induced in root cultures protein 12-like [Sesamum indicum] |
| JMSF043I09 | Sequence | 805 | 005142 (5) | ref|XP_011089023.1| | 2e-73 | PREDICTED: auxin-induced in root cultures protein 12-like [Sesamum indicum] | 763 | 008982 (5) | ref|XP_009777618.1| | 3e-78 | PREDICTED: probable histone-arginine methyltransferase 1.3 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
rJMFF028O22- T
____________________________________________________________
consensus T
. : . : . : . : . : . :
rJMFF028O22- TTAATTAGTATAATAGCCATGGCTGACAAGATCTTGTATAACACGTACAACAAGTTAGAA
rJMSF029L07- GTTAGAA
____________________________________________________________
consensus TTAATTAGTATAATAGCCATGGCTGACAAGATCTTGTATAACACGTACAACAAGTTAGAA
. : . : . : . : . : . :
rJMFF028O22- CCTCAACTCCATTACAAGATTCCGATCACAGCACTGTGAATGTTCTAAATTTTTTTCTAA
rJMSF029L07- CCTCAACTCCATTACAAGATTCCGATCACAGCACTGTGAATGTTCTAAATTTTTTTCTAA
____________________________________________________________
consensus CCTCAACTCCATTACAAGATTCCGATCACAGCACTGTGAATGTTCTAAATTTTTTTCTAA
. : . : . : . : . : . :
rJMFF028O22- AAAATGAAAAAGTTTTGATCTTGAAAATTTATTATAATAACACAGCAGAATTATCGTCTA
rJMSF029L07- AAAATGAAAAAGTTTTGATCTTGAAAATTTATTATAATAACACAGCAGAATTATCGTCTA
____________________________________________________________
consensus AAAATGAAAAAGTTTTGATCTTGAAAATTTATTATAATAACACAGCAGAATTATCGTCTA
. : . : . : . : . : . :
rJMFF028O22- AATCAAAGCACTAATCCAAAAATTCCGACAACTGTAAAGAATGCGTGTAGATTCATGTTA
rJMSF029L07- AATCAAAGCACTAATCCAAAAATTCCGACAACTGTAAAGAATGCGTGTAGATTCATGTTA
JMSF043I09+ AAAGAATGCGTGTAGATTCATGTTA
____________________________________________________________
consensus AATCAAAGCACTAATCCAAAAATTCCGACAACTGTAAAGAATGCGTGTAGATTCATGTTA
. : . : . : . : . : . :
rJMFF028O22- CTTTTCCAGTTTCTGGAAGCGCCGCCGGCGTCGTTGCCGGTGGTCTGCCCGGAAGCAGGG
rJMSF029L07- CTTTTCCAGTTTCTGGAAGCGCCGCCGGCGTCGTTGCCGGTGGTCTGCCCGGAAGCAGGG
JMSF043I09+ CTTTTCCAGTTTCTGGAAGCGCCGCCGGCGTCGTTGCCGGTGGTCTGCCCGGAAGCAGGG
____________________________________________________________
consensus CTTTTCCAGTTTCTGGAAGCGCCGCCGGCGTCGTTGCCGGTGGTCTGCCCGGAAGCAGGG
. : . : . : . : . : . :
rJMFF028O22- GAGATCGCAGTCTTTTTGCCGTCGCCGCCGGGGGCGGCGGCGGTGGGTGCCGGAGAAGGA
rJMSF029L07- GAGATCGCAGTCTTTTTGCCGTCGCCGCCGGGGGCGGCGGCGGTGGGTGCCGGAGAAGGA
JMSF043I09+ GAGATCGCAGTCTTTTTGCCGTCGCCGCCGGGGGCGGCGGCGGTGGGTGCCGGAGAAGGA
____________________________________________________________
consensus GAGATCGCAGTCTTTTTGCCGTCGCCGCCGGGGGCGGCGGCGGTGGGTGCCGGAGAAGGA
. : . : . : . : . : . :
rJMFF028O22- GCCTTGGAGATGGTGTTTCCGGCCGCCGTCAGGTCCAATGTGGATTTAGCGTCGAGATTT
rJMSF029L07- GCCTTGGAGATGGTGTTTCCGGCCGCCGTCAGGTCCAATGTGGATTTAGCGTCGAGATTT
JMSF043I09+ GCCTTGGAGATGGTGTTTCCGGCCGCCGTCAGGTCCAATGTGGATTTAGCGTCGAGATTT
JMSF029L07+ GAGATGGTGTTTCCGGCCGCCGTCAGGTCCAATGTGGATTTAGCGTCGAGATTT
____________________________________________________________
consensus GCCTTGGAGATGGTGTTTCCGGCCGCCGTCAGGTCCAATGTGGATTTAGCGTCGAGATTT
. : . : . : . : . : . :
rJMFF028O22- TCCTGACTCATTTGGTGCTTCTGCGGCACTCCGTCCTTGACGGACGCGCCCACCTGCCAA
rJMSF029L07- TCCTGACTCATTTGGTGCTTCTGCGGCACTCCGTCCTTGACGGACGCGCCCACCTGCCAA
JMSF043I09+ TCCTGACTCATTTGGTGCTTCTGCGGCACTCCGTCCTTGACGGACGCGCCCACCTGCCAA
JMSF029L07+ TCCTGACTCATTTGGTGCTTCTGCGGCACTCCGTCCTTGACGGACGCGCCCACCTGCCAA
____________________________________________________________
consensus TCCTGACTCATTTGGTGCTTCTGCGGCACTCCGTCCTTGACGGACGCGCCCACCTGCCAA
. : . : . : . : . : . :
rJMFF028O22- ACATGGTTCACCGTCGCCATTTTTTCCGGCAGCTCCACGGTGGCGAAAATTCTCATCACC
rJMSF029L07- ACATGGTTCACCGTCGCCATTTTTTCCGGCAGCTCCACGGTGGCGAAAATTCTCATCACC
JMSF043I09+ ACATGGTTCACCGTCGCCATTTTTTCCGGCAGCTCCACGGTGGCGAAAATTCTCATCACC
JMFF028O22+ TCATCACC
JMSF029L07+ ACATGGTTCACCGTCGCCATTTTTTCCGGCAGCTCCACGGTGGCGAAAATTCTCATCACC
____________________________________________________________
consensus ACATGGTTCACCGTCGCCATTTTTTCCGGCAGCTCCACGGTGGCGAAAATTCTCATCACC
. : . : . : . : . : . :
rJMFF028O22- CCGTCCGCCGCCGCCTCCGCCCGGGAGTCCAGCACCTTCAGGGAGAGCTTCTGCGGGGTT
rJMSF029L07- CCGTCCGCCGCCGCCTCCGCCCGGGAGTCCAGCACCTTCAGGGAGAGCTTCTGCGGGGTT
JMSF043I09+ CCGTCCGCCGCCGCCTCCGCCCGGGAGTCCAGCACCTTCAGGGAGAGCTTCTGCGGGGTT
JMFF028O22+ CCGTCCGCCGCCGCCTCCGCCCGGGAGTCCAGCACCTTCAGGGAGAGCTTCTGCGGGGTT
JMSF029L07+ CCGTCCGCCGCCGCCTCCGCCCGGGAGTCCAGCACCTTCAGGGAGAGCTTCTGCGGGGTT
____________________________________________________________
consensus CCGTCCGCCGCCGCCTCCGCCCGGGAGTCCAGCACCTTCAGGGAGAGCTTCTGCGGGGTT
. : . : . : . : . : . :
rJMFF028O22- ATGCCGCCGTA
rJMSF029L07- ATGCCGCCGTAGGAGGTGAGATTGTAAGTTTTCACGGCGACTTTGCCCTGTGGGTCCTTG
JMSF043I09+ ATGCCGCCGTAGGAGGTGAGATTGTAAGTTTTCACGGCGACTTTGCCCTGTGGGTCCTTG
JMFF028O22+ ATGCCGCCGTAGGAGGTGAGATTGTAAGTTTTCACGGCGACTTTGCCCTGTGGGTCCTTG
JMSF029L07+ ATGCCGCCGTAGGAGGTGAGATTGTAAGTTTTCACGGCGACTTTGCCCTGTGGGTCCTTG
____________________________________________________________
consensus ATGCCGCCGTAGGAGGTGAGATTGTAAGTTTTCACGGCGACTTTGCCCTGTGGGTCCTTG
. : . : . : . : . : . :
rJMSF029L07- AAGGCGATGAAGGCCTGCGTGCCGATCATGCCGGTGGCGGTGGGGTTAATGCCCCAGGCG
JMSF043I09+ AAGGCGATGAAGGCCTGCGTGCCGATCATGCCGGTGGCGGTGGGGTTAATGCCCCAGGCG
JMFF028O22+ AAGGCGATGAAGGCCTGCGTGCCGATCATGCCGGT-GCGGTGGGGTTAATGCCCCAGGCG
JMSF029L07+ AAGGCGATGAAGGCCTGCGTGCCGATCATGCCGGTGGCGGTGGGGTTAATGCCCCAGGCG
____________________________________________________________
consensus AAGGCGATGAAGGCCTGCGTGCCGATCATGCCGGTGGCGGTGGGGTTAATGCCCCAGGCG
. : . : . : . : . : . :
rJMSF029L07- ATCCACCCGTCGGCGGCGGCCGGCGGCGCCACGAA
JMSF043I09+ ATCCACCCGTCGGCGGCGGCCGGCGGCGCCACGAAGGCGACGGAGAGGGTGGATTTCGTC
JMFF028O22+ ATCCACCCGTCGGCGGCGGCCGGCGGCGCCACGAAGGCGACGGAGAGGGTGGATTTCGTC
JMSF029L07+ ATCCACCCGTCGGCGGCGGCCGGCGGCGCCACGAAGGCGACGGAGAGGGTGGATTTCGTC
____________________________________________________________
consensus ATCCACCCGTCGGCGGCGGCCGGCGGCGCCACGAAGGCGACGGAGAGGGTGGATTTCGTC
. : . : . : . : . : . :
JMSF043I09+ TGGTTATATGTCCAGTGGAGGAAAGCCTTGAGGGTGGGGAGGTCGGAGCAGTTGGCGTAG
JMFF028O22+ TGGTTATATGTCCAGTGGAGGAAAGCCTTGAGGGTGGGGAGGTCGGAGCAGTTGGCGTAG
JMSF029L07+ TGGTTATATGTCCAGTGGAGGAAAGCCTTGAGGGTGGGGAGGTCGGAGCAGTTGGCGTAG
____________________________________________________________
consensus TGGTTATATGTCCAGTGGAGGAAAGCCTTGAGGGTGGGGAGGTCGGAGCAGTTGGCGTAG
. : . : . : . : . : . :
JMSF043I09+ TGAGCTTTCGTCGAGAAAGTCTGCGACGTGCACTGTAGCGACACCGCCGGCGAGATTAGC
JMFF028O22+ TGAGCTTTCGTCGAGAAAGTCTGCGACGTGCACTGTAGCGACACCGCCGGCGAGATTAGC
JMSF029L07+ TGAGCTTTCGTCGAGAAAGTCTGCGACGTGCACTGTAGCGACACCGCCGGCGAGATTAGC
____________________________________________________________
consensus TGAGCTTTCGTCGAGAAAGTCTGCGACGTGCACTGTAGCGACACCGCCGGCGAGATTAGC
. : . : . : . : . : . :
JMSF043I09+ AGAGCTCCGAGGAGGAGGAGGAGGCTGAGGAGGGGAGAAAAGGAGGACATTGTGCGTTTT
JMFF028O22+ AGAGCTCCGAGGAGGAGGAGGAGGCTGAGGAGGGGAGAAAAGGAGGACATTGTGCG-TTT
JMSF029L07+ AGAGCTCCGAGGAGGAGGAGGAGGCTGAGGAGGGGAGAAAAGGAGGACATTGTGCGTTTT
____________________________________________________________
consensus AGAGCTCCGAGGAGGAGGAGGAGGCTGAGGAGGGGAGAAAAGGAGGACATTGTGCGTTTT
. : . : . : . : . : . :
JMSF043I09+ GCGACGCCGCAGGCGGTGGCTGACAACGGCCGTGTAGGTGGCGGTGTAGATAATAT
JMFF028O22+ GCGACGCCGCAGGCGGTGGCTGACAACGGCCGTGTAGGTGGCGGTGTAGATAATAT
JMSF029L07+ GCGACGCCGCAGGCGGTGGCTGACAACGGCCGTGTAGGTGGCGGTGTAGATAATATGACC
____________________________________________________________
consensus GCGACGCCGCAGGCGGTGGCTGACAACGGCCGTGTAGGTGGCGGTGTAGATAATATGACC