Contig 005140:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029G05+                                                                   ATTC
                      ____________________________________________________________
consensus                                                                     ATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS095G06+                             TGCTTCTGAAAACTTTTCAAGGAAGAAAACCCAAAGTGCTTG
JMSF029G05+           AACCAAGCTTCCAGAGANTGCTTCTGAAAACNTTTCAAGGAAGAAAACCCAAAGTGCTTG
                      ____________________________________________________________
consensus             AACCAAGCTTCCAGAGANTGCTTCTGAAAACTTTTCAAGGAAGAAAACCCAAAGTGCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS095G06+           ACCAACAAAGTTTTGACCTTCTTTTCCCAATCTTGGCCAAAGACCTCTTCATCTTTGCAA
JMSF029G05+           ACCAACAAAGTTTTGACCTTCTTTTCCCAATCTTGGCCAAAGACCTCTTCATCTTTGCAA
                      ____________________________________________________________
consensus             ACCAACAAAGTTTTGACCTTCTTTTCCCAATCTTGGCCAAAGACCTCTTCATCTTTGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS095G06+           TTCGATGGTACAGATGTTTCATGTGCATTGCACATATCAGTATCCATCACAGGAAGAAGC
JMSF029G05+           TTCGATGGTACAGATGTTTCATGTGCATTGCACATATCAGTATCCATCACAGGAAGAAGC
                      ____________________________________________________________
consensus             TTCGATGGTACAGATGTTTCATGTGCATTGCACATATCAGTATCCATCACAGGAAGAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS095G06+           TCAGTAGGACCTTCTAGGGTCCTCTGCAATGCCTCTGATTCACAGTGTGATACAGGTTCA
JMSF029G05+           TCAGTAGGACCTTCTAGGGTCCTCTGCAATGCCTCTGATTCACAGTGTGATACAGGTTCA
                      ____________________________________________________________
consensus             TCAGTAGGACCTTCTAGGGTCCTCTGCAATGCCTCTGATTCACAGTGTGATACAGGTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS095G06+           TCATTGTACTTCCTTTTTATAGGCTTGCAAGCTGATTTCAGGCATTCTTTTATATTAGAC
JMSF029G05+           TCATTGTACTTCCTTTTTATAGGCTTGCAAGCTGATTTCAGGCATTCTTTTATATTAGAC
                      ____________________________________________________________
consensus             TCATTGTACTTCCTTTTTATAGGCTTGCAAGCTGATTTCAGGCATTCTTTTATATTAGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS095G06+           TGCCTCGTTCTATCAAAAGCAGGCAAGGCATTAGGGGCTCTTTTCTGCCTAGAATTGGTC
JMSF029G05+           TGCCTCGTTCTATCAAAAGCAGGCAAGGCATTAGGGGCTCTTTTCTGCCTAGAATTGGTC
                      ____________________________________________________________
consensus             TGCCTCGTTCTATCAAAAGCAGGCAAGGCATTAGGGGCTCTTTTCTGCCTAGAATTGGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS095G06+           TTGGGGGCAACACATGTACTACTAGTTGATGTCCCCTTATTTCCATGTGAACCATCCAAT
JMSF029G05+           TTGGGGGCAACACATGTACTACTAGTTGATGTCCCCTTATTTCCATGTGAACCATCCAAT
                      ____________________________________________________________
consensus             TTGGGGGCAACACATGTACTACTAGTTGATGTCCCCTTATTTCCATGTGAACCATCCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS095G06+           ATATACTCAATTGCATGACTTACTGATGGACCAACTGCTTTTACAGCATCTGTAATATCA
JMSF029G05+           ATATACTCAATTGCATGACTTACTGATGGACCAACTGCTTTTACAGCATCTGTAATATCA
                      ____________________________________________________________
consensus             ATATACTCAATTGCATGACTTACTGATGGACCAACTGCTTTTACAGCATCTGTAATATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS095G06+           GAGAATTCAAATCCCATTCCAACCAATTCAGCAATTACCTGGTCAGAAGCCATGTTCCCG
JMSF029G05+           GAGAATTCAAATCCCATTCCAACCAATTCAGCAATTACCTGGTCAGAAGCCATGTTCCCG
                      ____________________________________________________________
consensus             GAGAATTCAAATCCCATTCCAACCAATTCAGCAATTACCTGGTCAGAAGCCATGTTCCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS095G06+           GAATAAACCTTGTGAAAACAATAGGAATTGGGGAGAGAGTGAACCCTAGAATCGAAGAAC
JMSF029G05+           GAATAAACCTTGTGAAAACAATAGGAATTGGGGAGAGAGTGAACCCTAGAATCGAAGAAC
                      ____________________________________________________________
consensus             GAATAAACCTTGTGAAAACAATAGGAATTGGGGAGAGAGTGAACCCTAGAATCGAAGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS095G06+           TTTAAACCCTGGCATTCGCAGTGTCC                                  
JMSF029G05+           TTTAAACCCTGGCATTCGCAGTGTCCGATGCTCCGCGCCAAGAAGACTGTCTCGCCCCCA
                      ____________________________________________________________
consensus             TTTAAACCCTGGCATTCGCAGTGTCCGATGCTCCGCGCCAAGAAGACTGTCTCGCCCCCA