Contig 005134:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF028H09-                                                  GGCACTTTTTGGCAAGTAAC
                      ____________________________________________________________
consensus                                                     GGCACTTTTTGGCAAGTAAC
 
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rJMSF028H09-          AATTAGTACTAAAAGGAAGCACAACAACAGCAACAAAGGTATTTCACACATAATTCATGC
                      ____________________________________________________________
consensus             AATTAGTACTAAAAGGAAGCACAACAACAGCAACAAAGGTATTTCACACATAATTCATGC
 
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rJMSF028H09-          TAAAATTAAAGATATTACCAGCCAAAGCATGCTAGACTCTAACAATATTTGCATCCTTTA
                      ____________________________________________________________
consensus             TAAAATTAAAGATATTACCAGCCAAAGCATGCTAGACTCTAACAATATTTGCATCCTTTA
 
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rJMSF028H09-          CTTCATTTGCACCCGTGAATTACACTTCTTTGGCTTCTGATGTAGATGTTCAAGTGCGTC
                      ____________________________________________________________
consensus             CTTCATTTGCACCCGTGAATTACACTTCTTTGGCTTCTGATGTAGATGTTCAAGTGCGTC
 
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rJMSF028H09-          TCTGAACTGCGAATTTGAAACAAACAAGTTAATAAAACTGTAGGGTATGCTTGCCTGCGA
                      ____________________________________________________________
consensus             TCTGAACTGCGAATTTGAAACAAACAAGTTAATAAAACTGTAGGGTATGCTTGCCTGCGA
 
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rJMSF028H09-          ATTACTTTCTACAAAACCCTACAGTAAATAGAGTATTTACGAAACATTTACAGTACAATA
JMSF028H09+                           CCCTACAGTAAATAGAGTATTTACGAAACATTTACAGTACAATA
                      ____________________________________________________________
consensus             ATTACTTTCTACAAAACCCTACAGTAAATAGAGTATTTACGAAACATTTACAGTACAATA
 
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rJMSF028H09-          TGAAAACCCTAACTGAAACGAACCATCAGATGAAGACTAAAGTAGAATCTTAACACAAAA
JMSF028H09+           TGAAAACCCTAACTGAAACGAACCATCAGATGAAGACTAAAGTAGAATCTTAACACAAAA
                      ____________________________________________________________
consensus             TGAAAACCCTAACTGAAACGAACCATCAGATGAAGACTAAAGTAGAATCTTAACACAAAA
 
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rJMSF028H09-          AAATTAAAACTTGGCAAAATCGTACTATAAAGTAACAAAAAAAGGTTTTCGAATACAAGG
JMSF028H09+           AAATTAAAACTTGGCAAAATCGTACTATAAAGTAACAAAAAAAGGTTTTCGAATACAAGG
                      ____________________________________________________________
consensus             AAATTAAAACTTGGCAAAATCGTACTATAAAGTAACAAAAAAAGGTTTTCGAATACAAGG
 
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rJMSF028H09-          ATTTAAAGAAGTAATGTAATAGGTAAACTTATCTCATAGTATCTCATAGTAGTTCCTTGA
JMSF028H09+           ATTTAAAGAAGTAATGTAATAGGTAAACTTATCTCATAGTATCTCATAGTAGTTCCTTGA
                      ____________________________________________________________
consensus             ATTTAAAGAAGTAATGTAATAGGTAAACTTATCTCATAGTATCTCATAGTAGTTCCTTGA
 
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rJMSF028H09-          TTTCATTGCATGTCCATGAATTGAAGTTGTAAATCGAACTCCATGCTTGACAAGGTAGAA
JMSF028H09+           TTTCATTGCATGTCCATGAATTGAAGTTGTAAATCGAACTCCATGCTTGACAAGGTAGAA
                      ____________________________________________________________
consensus             TTTCATTGCATGTCCATGAATTGAAGTTGTAAATCGAACTCCATGCTTGACAAGGTAGAA
 
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rJMSF028H09-          ATCTCTAGCTGCTGCTTTCGATCTACAGTTTGTATCGTGATTATTATCACGATTAATGCT
JMSF028H09+           ATCTCTAGCTGCTGCTTTCGATCTACAGTTTGTATCGTGATTATTATCACGATTAATGCT
                      ____________________________________________________________
consensus             ATCTCTAGCTGCTGCTTTCGATCTACAGTTTGTATCGTGATTATTATCACGATTAATGCT
 
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rJMSF028H09-          AAAAAATCGTGATATAAGCTACCATAAACCCAAAACAGAAATTTTAGTGGAAGA      
JMSF028H09+           AAAAAATCGTGATATAAGCTACCATAAACCCAAAACAGAAATTTTAGTGGAAGAAATTAG
                      ____________________________________________________________
consensus             AAAAAATCGTGATATAAGCTACCATAAACCCAAAACAGAAATTTTAGTGGAAGAAATTAG
 
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JMSF028H09+           GTAGAAGAAAGGTTTTCGGACAGAGTAGATCAGATATCGAAGAAACTAGGGTAGAAGCAA
                      ____________________________________________________________
consensus             GTAGAAGAAAGGTTTTCGGACAGAGTAGATCAGATATCGAAGAAACTAGGGTAGAAGCAA
 
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JMSF028H09+           GGTCAGCGGACAGATTAGATCAGAGATCGACGAAATTAGGGTAGTTGCACCCGTGATCGG
                      ____________________________________________________________
consensus             GGTCAGCGGACAGATTAGATCAGAGATCGACGAAATTAGGGTAGTTGCACCCGTGATCGG
 
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JMSF028H09+           ATAGAGTAGATCAGAGAAAATCGATTAAATGACCGTAGAATGATGTTGTTCGGACAGAGT
                      ____________________________________________________________
consensus             ATAGAGTAGATCAGAGAAAATCGATTAAATGACCGTAGAATGATGTTGTTCGGACAGAGT
 
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JMSF028H09+           AGATGAGCGAACGTCTCCTTGCCGATTGTCGAGAGAGAAGATGAAGGGTCGGGTAGGTCC
                      ____________________________________________________________
consensus             AGATGAGCGAACGTCTCCTTGCCGATTGTCGAGAGAGAAGATGAAGGGTCGGGTAGGTCC