Contig 005132:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS098A01Sequence624005132 (2)ref|XP_009614487.1|2e-68PREDICTED: cyclin-dependent kinase E-1-like [Nicotiana tomentosiformis]
JMSF028E14Sequence704005132 (2)ref|XP_009614487.1|3e-70PREDICTED: cyclin-dependent kinase E-1-like [Nicotiana tomentosiformis]716024593ref|XP_006362710.1|2e-66PREDICTED: cyclin-dependent kinase E-1-like isoform X1 [Solanum tuberosum] ref|

Alignment

This contig is upended


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JMFS098A01+                                    GTTGCTATGAAGATAATTCAAACCGTTAAGCAGCT
JMSF028E14+                           CACAATCCAGTTGCTATGAAGATAATTCAAACCGTTAAGCAGCT
                      ____________________________________________________________
consensus                             CACAATCCAGTTGCTATGAAGATAATTCAAACCGTTAAGCAGCT
 
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JMFS098A01+           GCCACAACAAGGACTTAATGGTGTAGTTATTGATTGGCTGGTTGACCTTGTCTCGATGAT
JMSF028E14+           GCCACAACAAGGACTTAATGGTGTAGTTATTGATTGGCTGGTTGACCTTGTCTCGATGAT
                      ____________________________________________________________
consensus             GCCACAACAAGGACTTAATGGTGTAGTTATTGATTGGCTGGTTGACCTTGTCTCGATGAT
 
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JMFS098A01+           GTCTTATTATTTCATAAAGGTCATGCTCCGCATAGTCAAAAGCAAGGTACAGCGACATAT
JMSF028E14+           GTCTTATTATTTCATAAAGGTCATGCTCCGCATAGTCAAAAGCAAGGTACAGCGACATAT
                      ____________________________________________________________
consensus             GTCTTATTATTTCATAAAGGTCATGCTCCGCATAGTCAAAAGCAAGGTACAGCGACATAT
 
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JMFS098A01+           CTGCAGAGTTGATGTGTACATTCACCAGTTTTACAACATTCTCATGGGTTATCTCCCGGA
JMSF028E14+           CTGCAGAGTTGATGTGTACATTCACCAGTTTTACAACATTCTCATGGGTTATCTCCCGGA
                      ____________________________________________________________
consensus             CTGCAGAGTTGATGTGTACATTCACCAGTTTTACAACATTCTCATGGGTTATCTCCCGGA
 
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JMFS098A01+           GCAACATGATTTCGCGAATGGCGGTGGGGGAGACGCCGTCTCCGTCCTTGGACTGCTTGA
JMSF028E14+           GCAACATGATTTCGCGAATGGCGGTGGGGGAGACGCCGTCTCCGTCCTTGGACTGCTTGA
                      ____________________________________________________________
consensus             GCAACATGATTTCGCGAATGGCGGTGGGGGAGACGCCGTCTCCGTCCTTGGACTGCTTGA
 
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JMFS098A01+           ACTTCTTGATTGCAATAGGTTTGTTGCCGTTGGATTTGATCTTCGCCAGAAACACCAATC
JMSF028E14+           ACTTCTTGATTGCAATAGGTTTGTTGCCGTTGGATTTGATCTTCGCCAGAAACACCAATC
                      ____________________________________________________________
consensus             ACTTCTTGATTGCAATAGGTTTGTTGCCGTTGGATTTGATCTTCGCCAGAAACACCAATC
 
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JMFS098A01+           CGTACGTTCCTTCCCCGATCTTCCCGAGAAGATCGTACTGTTGCAGCCACTCCGGCCTAT
JMSF028E14+           CGTACGTTCCTTCCCCGATCTTCCCGAGAAGATCGTACTGTTGCAGCCACTCCGGCCTAT
                      ____________________________________________________________
consensus             CGTACGTTCCTTCCCCGATCTTCCCGAGAAGATCGTACTGTTGCAGCCACTCCGGCCTAT
 
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JMFS098A01+           TTCCCGAATTTCCACCTCCTCTACCGCCGTCTCCCATTTGTGTCGGATTTCTTAATTGAG
JMSF028E14+           TTCCCGAATTTCCACCTCCTCTACCGCCGTCTCCCATTTGTGTCGGATTTCTTAATTGAG
                      ____________________________________________________________
consensus             TTCCCGAATTTCCACCTCCTCTACCGCCGTCTCCCATTTGTGTCGGATTTCTTAATTGAG
 
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JMFS098A01+           TTCTGTGTTTCTTTCTGCTCAAACTCCCTCTGATTCTTGTACTCCTACTATTTCCAGCAG
JMSF028E14+           TTCTGTGTTTCTTTCTGCTCAAACTCCCTCTGATTCTTGTACTCCTACTATTTCCAGCAG
                      ____________________________________________________________
consensus             TTCTGTGTTTCTTTCTGCTCAAACTCCCTCTGATTCTTGTACTCCTACTATTTCCAGCAG
 
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JMFS098A01+           AGTTTTGCAGAGCACCAAAAAAGGGAGAATACGATAAGGGAAAGTTTTTAATTTCCAAAT
JMSF028E14+           AGTTTTGCAGAGCACCAAAAAAGGGAGAATACGATAAGGGAAAGTTTTTAATTTCCAAAT
                      ____________________________________________________________
consensus             AGTTTTGCAGAGCACCAAAAAAGGGAGAATACGATAAGGGAAAGTTTTTAATTTCCAAAT
 
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JMFS098A01+           ACCCAACTCTTCCAACTGCGGAAATTTAATATGAAAGTCATACTCAAAT           
JMSF028E14+           ACCCAACTCTTCCAACTGCGGAAATTTAATATGAAAGTCATACTCAAATTATTTTATGCC
                      ____________________________________________________________
consensus             ACCCAACTCTTCCAACTGCGGAAATTTAATATGAAAGTCATACTCAAATTATTTTATGCC
 
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JMSF028E14+           CAAATTACTTATGGAGGAAAATCTAGGGCATTTACCTTATTGCAGTTTTGGGCGAGAATC
                      ____________________________________________________________
consensus             CAAATTACTTATGGAGGAAAATCTAGGGCATTTACCTTATTGCAGTTTTGGGCGAGAATC