Contig 005127:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF039J15+                                                                  TTAAG
                      ____________________________________________________________
consensus                                                                    TTAAG
 
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JMFS147E11+                                           ATGAGGTCCCGGCCTGACTAATCCCGGG
JMFF035K05+                     GTATCAATAAGAAATGAAGGTGATGAGGTCCCGGCCTGACTAATCCCGGG
JMSF039J15+           CCCCGGCACCGTATCAATAAGAAATGAAGGTGATGAGGTCCCGGCCTGACTAATCCCGGG
                      ____________________________________________________________
consensus             CCCCGGCACCGTATCAATAAGAAATGAAGGTGATGAGGTCCCGGCCTGACTAATCCCGGG
 
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JMFS147E11+           ATTATTGTTACTGTTGGTAATTATATTTGGATTCCCAGAAAACATCACCCCTCCTCCTCC
JMFF035K05+           ATTATTGTTACTGTTGGTAATTATATTTGGATTCCCAGAAAACATCACCCCTCCTCCTCC
JMSF039J15+           ATTATTGTTACTGTTGGTAATTATATTTGGATTCCCAGAAAACATCACCCCTCCTCCTCC
JMSF027M04+                                                                  CCTCC
                      ____________________________________________________________
consensus             ATTATTGTTACTGTTGGTAATTATATTTGGATTCCCAGAAAACATCACCCCTCCTCCTCC
 
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JMFS147E11+           TGATAAACCACTAGCACTGTTGCTATTATTTACATTTACATTTACCCCGAGATGACCATA
JMFF035K05+           TGATAAACCACTAGCACTGTTGCTATTATTTACATTTACATTTACCCCGAGATGACCATA
JMSF039J15+           TGATAAACCACTAGCACTGTTGCTATTATTTACATTTACATTTACCCCGAGATGACCATA
JMSF027M04+           TGATAAACCACTAGCACTGTTGCTATTATTTACATTTACATTTACCCCGAGATGACCATA
                      ____________________________________________________________
consensus             TGATAAACCACTAGCACTGTTGCTATTATTTACATTTACATTTACCCCGAGATGACCATA
 
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JMFS147E11+           AAAGTTACCAATCGGAATCATCTCCGACGACACCCCCGACTGAAAAGACCAGGCTTGCTG
JMFF035K05+           AAAGTTACCAATCGGAATCATCTCCGACGACACCCCCGACTGAAAAGACCAGGCTTGCTG
JMSF039J15+           AAAGTTACCAATCGGAATCATCTCCGACGACACCCCCGACTGAAAAGACCAGGCTTGCTG
JMSF027M04+           AAAGTTACCAATCGGAATCATCTCCGACGACACCCCCGACTGAAAAGACCAGGCTTGCTG
                      ____________________________________________________________
consensus             AAAGTTACCAATCGGAATCATCTCCGACGACACCCCCGACTGAAAAGACCAGGCTTGCTG
 
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JMFS147E11+           TTGATGAAACCCCATGTTCGATTCTGCCGCCATTTCTATATCCTCAACTACTCCTACTAT
JMFF035K05+           TTGATGAAACCCCATGTTCGATTCTGCCGCCATTTCTATATCCTCAACTACTCCTACTAT
JMSF039J15+           TTGATGAAACCCCATGTTCGATTCTGCCGCCATTTCTATATCCTCAACTACTCCTACTAT
JMSF027M04+           TTGATGAAACCCCATGTTCGATTCTGCCGCCATTTCTATATCCTCAACTACTCCTACTAT
                      ____________________________________________________________
consensus             TTGATGAAACCCCATGTTCGATTCTGCCGCCATTTCTATATCCTCAACTACTCCTACTAT
 
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JMFS147E11+           CCCCAAATTACAACAGCAAACAACTAGAAGCTATAGCATAAGCTCCCAACTTGCAAAAAC
JMFF035K05+           CCCCAAGTTACAACAGCAAACAACTAGAAGCTATAGCATAAGCTCCCAACTTGCAAAAAC
JMSF039J15+           CCCCAAATTACAACAGCAAACAACTAGAAGCTATAGCATAAGCTCCCAACTTGCAAAAAC
JMSF027M04+           CCCCAAATTACAACAGCAAACAACTAGAAGCTATAGCATAAGCTCCCAACTTGCAAAAAC
                      ____________________________________________________________
consensus             CCCCAAATTACAACAGCAAACAACTAGAAGCTATAGCATAAGCTCCCAACTTGCAAAAAC
 
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JMFS147E11+           AAAAAATCAAAATCAAAAACAAAAACTCTAAATTCCTCAGCTCTCAGCTCCCTTAAACCC
JMFF035K05+           AAAAAATCAAAATCAAAAACAAAAACTCTAAATTCCTCAGCTCTCAGCTCCCTTAAACCC
JMSF039J15+           AAAAAATCAAAATCAAAAACAAAAACTCTAAATTCCTCAGCTCTCAGCTCCCTTAAACCC
JMSF027M04+           AAAAAATCAAAATCAAAAACAAAAACTCTAAATTCCTCAGCTCTCAGCTCCCTTAAACCC
                      ____________________________________________________________
consensus             AAAAAATCAAAATCAAAAACAAAAACTCTAAATTCCTCAGCTCTCAGCTCCCTTAAACCC
 
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JMFS147E11+           AAAAAAGGACTCCTATCCAACTCCTAATACCAACGCGTGAAATTAACGAACAAAAACAGA
JMFF035K05+           AAAAAAGGACTCCTATCCAACTCCTAATACCAACGCGTGAAATTAACGAACAAAAACAGA
JMSF039J15+           AAAAAAGGACTCCTATCCAACTCCTAATACCAACGCGTGAAATTAACGAACAAAAACAGA
JMSF027M04+           AAAAAAGGACTCCTATCCAACTCCTAATACCAACGCGTGAAATTAACGAACAAAAACAGA
                      ____________________________________________________________
consensus             AAAAAAGGACTCCTATCCAACTCCTAATACCAACGCGTGAAATTAACGAACAAAAACAGA
 
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JMFS147E11+           GCATTCTCCGAGTAAAATTTGAGCAAATATCAAGTTGAATCTCCAGGTTCAAATTACACT
JMFF035K05+           GCATTCTCCGAGTAAAATTTGAGCAAATATCAAGTTGAATCTCCAGGTTCAAATTACACT
JMSF039J15+           GCATTCTCCGAGTAAAATTTGAGCAAATATCAAGTTGAATCTCCAGGTTCAAATTACACT
JMSF027M04+           GCATTCTCCGAGTAAAATTTGAGCAAATATCAAGTTGAATCTCCAGGTTCAAATTACACT
                      ____________________________________________________________
consensus             GCATTCTCCGAGTAAAATTTGAGCAAATATCAAGTTGAATCTCCAGGTTCAAATTACACT
 
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JMFS147E11+           GAAGTGCAATTTTTCCCCGTCATTGAATCACAGAATAGATATGAAAAAAACCCTAACCTG
JMFF035K05+           GAAGTGCAATTTTTCCCCGTCATTGAATCACAGAATAGATATGAAAAAAACCCTAACCT 
JMSF039J15+           GAAGTGCAATTTTTCCCCGTCATTGAATCACAGAATAGATATGAAAAAAACCCTAACCTG
JMSF027M04+           GAAGTGCAATTTTTCCCCGTCATTGAATCACAGAATAGATATGAAAAAAACCCTAACCTG
                      ____________________________________________________________
consensus             GAAGTGCAATTTTTCCCCGTCATTGAATCACAGAATAGATATGAAAAAAACCCTAACCTG
 
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JMFS147E11+           CAAGAATCGAAAAATAGCAGCAGTAATTAGAAGAGTATTGGGATAGAAAGTGGAGTT   
JMSF039J15+           CAAGAATCGAAAAATAGCAGCAGTAATTAGAAGAGTATTGGGATAGAAAGTGGAGTT   
JMSF027M04+           CAAGAATCGAAAAATAGCAGCAGTAATTAGAAGAGTATTGGGATAGAAAGTGGAGTTACC
                      ____________________________________________________________
consensus             CAAGAATCGAAAAATAGCAGCAGTAATTAGAAGAGTATTGGGATAGAAAGTGGAGTTACC