Contig 005122:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS133G02Sequence626005122 (2)emb|CDP02515.1|3e-46unnamed protein product [Coffea canephora]
JMSF027F02Sequence598005122 (2)emb|CDP02515.1|6e-14unnamed protein product [Coffea canephora]692003352 (4)ref|NP_001233886.1|2e-36AP2 transcription factor SlAP2c [Solanum lycopersicum] gb|AEF28820.1| AP2 transc

Alignment

This contig is upended


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JMFS133G02+             AACTTGCTTCCCACAATCCCATATGTGAGATTCCCAGCGGCCAGTTCGCCGGTAAAAG
                      ____________________________________________________________
consensus               AACTTGCTTCCCACAATCCCATATGTGAGATTCCCAGCGGCCAGTTCGCCGGTAAAAG
 
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JMFS133G02+           GTGACGCCGCGATATTGGGAGCTGCGGGACCGTGGTCCACGGCGGCTCTTCTTCATAGGC
                      ____________________________________________________________
consensus             GTGACGCCGCGATATTGGGAGCTGCGGGACCGTGGTCCACGGCGGCTCTTCTTCATAGGC
 
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JMFS133G02+           TGCTGAGAGACCTCCAAAGGCTTTCCGGCAGCGGCGGCGCCGTTGAGAGGGTCAGACTGG
                      ____________________________________________________________
consensus             TGCTGAGAGACCTCCAAAGGCTTTCCGGCAGCGGCGGCGCCGTTGAGAGGGTCAGACTGG
 
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JMFS133G02+           CAGAACTTAACTCCGACCCAGTGAGCGGCTCTCGGGAAACTGGGAGATCCATCGCCGGAG
                      ____________________________________________________________
consensus             CAGAACTTAACTCCGACCCAGTGAGCGGCTCTCGGGAAACTGGGAGATCCATCGCCGGAG
 
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JMFS133G02+           GTGGCCCCCATTTCCGACTCATCAACCGGGAAGAACTGCCTTGTCACCGGCGGCGGCTCA
                      ____________________________________________________________
consensus             GTGGCCCCCATTTCCGACTCATCAACCGGGAAGAACTGCCTTGTCACCGGCGGCGGCTCA
 
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JMFS133G02+           CTCTCCGACGACCAGTTGTCGTCGCTCCGACCCACCACCGGAAACCCAAAAATCTTGTTC
                      ____________________________________________________________
consensus             CTCTCCGACGACCAGTTGTCGTCGCTCCGACCCACCACCGGAAACCCAAAAATCTTGTTC
 
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JMFS133G02+           CCACCGCCGCCGCCTCTCTTTCGCCGGTCTTCCTCATCCTCCGATGAAACATCCTCAACC
                      ____________________________________________________________
consensus             CCACCGCCGCCGCCTCTCTTTCGCCGGTCTTCCTCATCCTCCGATGAAACATCCTCAACC
 
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JMFS133G02+           ACCAACGCCGCCGACGAGCTGGAATTCGACACCGATCCAACCCCTTTCCCTTTCTCGTCA
JMSF027F02+                  CCGCCGACGAGCTTGAATTCGACACGGATCCGACCCGTTTCCCCTTCTCATCA
                      ____________________________________________________________
consensus             ACCAACGCCGCCGACGAGCTTGAATTCGACACGGATCCGACCCGTTTCCCTTTCTCGTCA
 
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JMFS133G02+           TCTCCGTCCATCGGAGAACAGCACCCTTCATCCGACTCCTCGTCCCTTCTCTGATCCGGC
JMSF027F02+           TCCCCGTCCACCGGCGACGAGCACCCATCTTCCGATTCGTCGTCCCCTCTCTGATCCGGC
                      ____________________________________________________________
consensus             TCTCCGTCCATCGGCGACGAGCACCCTTCTTCCGATTCGTCGTCCCTTCTCTGATCCGGC
 
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JMFS133G02+           GAATCGTTTAGATCCCACATT                                       
JMSF027F02+           GAATCGTTTAGATCCCACATTTCTCCACTCCTTTCCATAAACCCTCCCAAACCACTCAGC
                      ____________________________________________________________
consensus             GAATCGTTTAGATCCCACATTTCTCCACTCCTTTCCATAAACCCTCCCAAACCACTCAGC
 
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JMSF027F02+           TCAAACAACCAAAACTATAATAAAAGCCAAAATTTTGGGGATTTCCAAGCTTTAGCTATG
                      ____________________________________________________________
consensus             TCAAACAACCAAAACTATAATAAAAGCCAAAATTTTGGGGATTTCCAAGCTTTAGCTATG
 
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JMSF027F02+           GCTATAGCTTTTTCTCAGAGTTCATACATATGTGTATGCGTCTGTATGTGTGCGCCTACA
                      ____________________________________________________________
consensus             GCTATAGCTTTTTCTCAGAGTTCATACATATGTGTATGCGTCTGTATGTGTGCGCCTACA
 
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JMSF027F02+           TGCGTGTATATATATATATACACACATATTCTCTCTGACTCTGCGCTTCCCTAATTAAAT
                      ____________________________________________________________
consensus             TGCGTGTATATATATATATACACACATATTCTCTCTGACTCTGCGCTTCCCTAATTAAAT
 
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JMSF027F02+           AGATAAGTATAGATGAAAAGGAAAATAAAATAATGGGGAAAACGAAGGTTTGTGCTGCCC
                      ____________________________________________________________
consensus             AGATAAGTATAGATGAAAAGGAAAATAAAATAATGGGGAAAACGAAGGTTTGTGCTGCCC