Contig 005116:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF027A17-                       CTTCATTCACTTTGTACAAGGCATTCCAAATTCTTGGACCAAATATG
                      ____________________________________________________________
consensus                          CTTCATTCACTTTGTACAAGGCATTCCAAATTCTTGGACCAAATATG
 
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rJMSF027A17-          GTCAAAGATGTTTTTGATACAAAAAGAAAAGAAATAATCACAAATCTAATGCTCAGTTTA
                      ____________________________________________________________
consensus             GTCAAAGATGTTTTTGATACAAAAAGAAAAGAAATAATCACAAATCTAATGCTCAGTTTA
 
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rJMSF027A17-          TCACAATCAGTTTATTTGTATGCTTTGGCACGCAGATTTATTTGGGTTCAAAATCGGGGC
                      ____________________________________________________________
consensus             TCACAATCAGTTTATTTGTATGCTTTGGCACGCAGATTTATTTGGGTTCAAAATCGGGGC
 
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rJMSF027A17-          TTAGTAGTGGGGAGGCGGATAAGCACCGGCAGCTGGCGGCGGTGGATACACACCCAAGGA
                      ____________________________________________________________
consensus             TTAGTAGTGGGGAGGCGGATAAGCACCGGCAGCTGGCGGCGGTGGATACACACCCAAGGA
 
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rJMSF027A17-          TGGAGGAGGGTTTTGGTAATGTTCGTTTGTCGTCTGGGGCGGCGGCCATGGACTTCCACT
JMSF027A17+                                                 GCGGCGGCCATGGACTTCCACT
                      ____________________________________________________________
consensus             TGGAGGAGGGTTTTGGTAATGTTCGTTTGTCGTCTGGGGCGGCGGCCATGGACTTCCACT
 
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rJMSF027A17-          CAACCAAACTGGGGGATAGACACCGGGGGCGTGAGGAGGAGGTTGTGGAGGATAACCACC
JMSF027A17+           CAACCAAACTGGGGGATAGACACCGGGGGCGTGAGGAGGAGGTTGTGGAGGATAACCACC
                      ____________________________________________________________
consensus             CAACCAAACTGGGGGATAGACACCGGGGGCGTGAGGAGGAGGTTGTGGAGGATAACCACC
 
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rJMSF027A17-          GGCAGGGGCGGCGGCGGGTGGTGGCGGGTAGGCGGCGCCAGGTGGGGCATACGGGTAGGG
JMSF027A17+           GGCAGGGGCGGCGGCGGGTGGTGGCGGGTAGGCGGCGCCAGGTGGGGCATACGGGTAGGG
                      ____________________________________________________________
consensus             GGCAGGGGCGGCGGCGGGTGGTGGCGGGTAGGCGGCGCCAGGTGGGGCATACGGGTAGGG
 
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rJMSF027A17-          AGGATAACAAGATGAGTGAGTTTGCGGGGGATAAGGGGCAGGCACATATGGCTCGGAGTT
JMSF027A17+           AGGATAACAAGATGAGTGAGTTTGCGGGGGATAAGGGGCAGGCACATATGGCTCGGAGTT
                      ____________________________________________________________
consensus             AGGATAACAAGATGAGTGAGTTTGCGGGGGATAAGGGGCAGGCACATATGGCTCGGAGTT
 
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rJMSF027A17-          AGAAGAGTAGGTGGGGCAAGGAACCGAAGCAGACGAAGCCGCCGCCGCCGCCGGAGGAGG
JMSF027A17+           AGAAGAGTAGGTGGGGCAAGGAACCGAAGCAGACGAAGCCGCCGCCGCCGCCGGAGGAGG
                      ____________________________________________________________
consensus             AGAAGAGTAGGTGGGGCAAGGAACCGAAGCAGACGAAGCCGCCGCCGCCGCCGGAGGAGG
 
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rJMSF027A17-          ATATGGAACCGGAGCTGCTAAACTTGAAAAGAAAAGAAATGGCGTTTGACTTGGTGGATT
JMSF027A17+           ATATGGAACCGGAGCTGCTAAACTTGAAAAGAAAAGAAATGGCGTTTGACTTGGTGGATT
                      ____________________________________________________________
consensus             ATATGGAACCGGAGCTGCTAAACTTGAAAAGAAAAGAAATGGCGTTTGACTTGGTGGATT
 
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rJMSF027A17-          AGGATTAGAATTAGGATTGGGAGGATAAGAACTTGGGACTGCAGGACTGCCAAGAGGAGG
JMSF027A17+           AGGATTAGAATTAGGATTGGGAGGATAAGAACTTGGGACTGCAGGACTGCCAAGAGGAGG
                      ____________________________________________________________
consensus             AGGATTAGAATTAGGATTGGGAGGATAAGAACTTGGGACTGCAGGACTGCCAAGAGGAGG
 
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rJMSF027A17-          AAAGGCCGTGGCAGCAGCCGGCGCANGGTANGTGGCGGCGGCNGCGGCCGGCTGATAA  
JMSF027A17+           AAAGGCCGTGGCAGCAGCCGGCGCAGGGTAGGTGGCGGCGGCGGCGGCCGGCTGATAAGA
                      ____________________________________________________________
consensus             AAAGGCCGTGGCAGCAGCCGGCGCAGGGTAGGTGGCGGCGGCGGCGGCCGGCTGATAAGA
 
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JMSF027A17+           AGCTGCCGGAGAAGGGTGTACGCCATTGTAGGGTAACACAGTGGAAATGGTAGAATTTGG
                      ____________________________________________________________
consensus             AGCTGCCGGAGAAGGGTGTACGCCATTGTAGGGTAACACAGTGGAAATGGTAGAATTTGG
 
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JMSF027A17+           GGTTGTATATAATGGTACCTCAGGAGGCTTCACACTGCAATCCAAACTCTCCCCAGAACT
                      ____________________________________________________________
consensus             GGTTGTATATAATGGTACCTCAGGAGGCTTCACACTGCAATCCAAACTCTCCCCAGAACT
 
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JMSF027A17+           ACCGGTTTGGTTTGCAGGGATTGGTGTATAAGGAACAGCACCCATGGTGTATCTATTGCC
                      ____________________________________________________________
consensus             ACCGGTTTGGTTTGCAGGGATTGGTGTATAAGGAACAGCACCCATGGTGTATCTATTGCC