Contig 005113:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043A20Sequence448005113 (6)ref|XP_006350837.1|8e-37PREDICTED: uncharacterized protein LOC102588803 isoform X2 [Solanum tuberosum]439005113 (6)ref|XP_006350837.1|4e-35PREDICTED: uncharacterized protein LOC102588803 isoform X2 [Solanum tuberosum]
JMFF046L13Sequence577005113 (6)ref|XP_006350837.1|5e-68PREDICTED: uncharacterized protein LOC102588803 isoform X2 [Solanum tuberosum]464009657 (3)
JMFS106D08Sequence613005113 (6)ref|XP_006350837.1|7e-76PREDICTED: uncharacterized protein LOC102588803 isoform X2 [Solanum tuberosum]
JMSF026L09Sequence635005113 (6)ref|XP_006350837.1|4e-50PREDICTED: uncharacterized protein LOC102588803 isoform X2 [Solanum tuberosum]773022557ref|XP_009773250.1|3e-41PREDICTED: uncharacterized protein LOC104223496 isoform X1 [Nicotiana sylvestri
JMSF036H11Sequence657005113 (6)ref|XP_006350837.1|2e-78PREDICTED: uncharacterized protein LOC102588803 isoform X2 [Solanum tuberosum]747009657 (3)

Alignment

This contig is upended


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JMSF036H11+                                                          CTAGGTAGTAAAT
                      ____________________________________________________________
consensus                                                            CTAGGTAGTAAAT
 
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JMFS106D08+                              CAGATCGACGTGATCCACAGTTCCGTCCGTCGGATCGAAGA
JMSF036H11+           GGAAGAATCCGGNTTGCTTCAGATCGACGTGATCCACAGTTCCGTCCGTCGGATCGAAGA
                      ____________________________________________________________
consensus             GGAAGAATCCGGNTTGCTTCAGATCGACGTGATCCACAGTTCCGTCCGTCGGATCGAAGA
 
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JMFS106D08+           TCCGAATTAGGGCTTGGATGTCGACGAACACCGTCTTGCAGATACCGATCATTTTCTCGA
JMFF046L13+                 TTAGGGCTTGGATGTCGACGAACACCGTCTTGCAGATACCGATCATTTTCTCGA
JMSF036H11+           TCCGAATTAGGGCTTGGATGTCGACGAACACCGTCTTGCAGATACCGATCATTTTCTCGA
                      ____________________________________________________________
consensus             TCCGAATTAGGGCTTGGATGTCGACGAACACCGTCTTGCAGATACCGATCATTTTCTCGA
 
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JMFS106D08+           GCGTTTCCGGCAGAATCTCCCCGCCTACGCCGACGGCCAACCCGAAATCGAATTCCGAGT
JMFF046L13+           GCGTTTCCGGCAGAATCTCCCCGCCTACGCCGACGGCCAACCCGAAATCGAATTCCGAGT
JMSF036H11+           GCGTTTCCGGCAGAATCTCCCCGCNTACGCCGACGGCCAACCCGAAATCGAATTCCGAGT
JMSF026L09+                                    TACGCCGACGGCCAACCCGAAATCGAATTCCGAGT
                      ____________________________________________________________
consensus             GCGTTTCCGGCAGAATCTCCCCGCCTACGCCGACGGCCAACCCGAAATCGAATTCCGAGT
 
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JMFS106D08+           CGGGGAGATCCGACGCGGCGATCGATTCGCACGCCCGGATCCGCTTGAGAACCCGATCCC
JMFF046L13+           CGGGGAGATCCGACGCGGCGATCGATTCGCACGCCCGGATCCGCTTGAGAACCCGATCCC
JMSF036H11+           CGGGGAGATCCGACGCGGCGATCGATTCGCACGCCCGGATCCGCTTGAGAACCCGATCCC
JMFF043A20+                                                     GCTTGAGAACCCGATCCC
rJMFF043A20-                                                             CCCGATCCC
JMSF026L09+           CGGGGAGATCCGACGCGGCGATCGATTCGCACGCCCGGATCCGCTTGAGAACCCGATCCC
                      ____________________________________________________________
consensus             CGGGGAGATCCGACGCGGCGATCGATTCGCACGCCCGGATCCGCTTGAGAACCCGATCCC
 
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JMFS106D08+           GGCGCTTGATTTCAGACGAGAAATAGGCGTGGAAGAGGGTGGTTTGCGAGGAAGGGCAAA
JMFF046L13+           GGCGCTTGATTTCAGACGAGAAATAGGCGTGGAAGAGGGTGGTTTGCGAGGAAGGGCAAA
JMSF036H11+           GGCGCTTGATTTCAGACGAGAAATAGGCGTGGAAGAGGGTGGTTTGCGAGGAAGGGCAAA
JMFF043A20+           GGCGCTTGATTTCAGACGAGAAATAGGCGTGGAAGAGGGTGGTTTGCGAGGAAGGGCAAA
rJMFF043A20-          GGCGCTTGATTTCAGACGAGAAATAGGCGTGGAAGAGGGTGGTTTGCGAGGAAGGGCAAA
JMSF026L09+           GGCGCTTGATTTCAGACGAGAAATAGGCGTGGAAGAGGGTGGTTTGCGAGGAAGGGCAAA
                      ____________________________________________________________
consensus             GGCGCTTGATTTCAGACGAGAAATAGGCGTGGAAGAGGGTGGTTTGCGAGGAAGGGCAAA
 
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JMFS106D08+           CAATCGGGCGGTGGCTAACGGAGTAAGCGAAATCAGGGCCCACCTTAGACACGTAGTGGC
JMFF046L13+           CAATCGGGCGGTGGCTAACGGAGTAAGCGAAATCAGGGCCCACCTTAGACACGTAGTGGC
JMSF036H11+           CAATCGGGCGGTGGCTAACGGAGTAAGCGAAATCAGGGCCCACCTTAGACACGTAGTGGC
JMFF043A20+           CAATCGGGCGGTGGCTAACGGAGTAAGCGAAATCAGGGCCCACCTTAGACACGTAGTGGC
rJMFF043A20-          CAATCGGGCGGTGGCTAACGGAGTAAGCGAAATCAGGGCCCACCTTAGACACGTAGTGGC
JMSF026L09+           CAATCGGGCGGTGGCTAACGGAGTAAGCGAAATCAGGGCCCACCTTAGACACGTAGTGGC
                      ____________________________________________________________
consensus             CAATCGGGCGGTGGCTAACGGAGTAAGCGAAATCAGGGCCCACCTTAGACACGTAGTGGC
 
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JMFS106D08+           ACGCGACGTTGAAGCCTTCGAGCACGGCGGAGATGAAGGAGGCGGCGCCGCCGAGGGACT
JMFF046L13+           ACGCGACGTTGAAGCCTTCGAGCACGGCGGAGATGAAGGAGGCGGCGCCGCCGAGGGACT
JMSF036H11+           ACGCGACGTTGAAGCCTTCGAGCACGGCGGAGATGAAGGAGGCGGCGCCGCCGAGGGACT
JMFF043A20+           ACGCGACGTTGAAGCCTTCGAGCACGGCGGAGATGAAGGAGGCGGCGCCGCCGAGGGACT
rJMFF043A20-          ACGCGACGTTGAAGCCTTCGAGCACGGCGGAGATGAAGGAGGCGGCGCCGCCGAGGGACT
JMSF026L09+           ACGCGACGTTGAAGCCTTCGAGCACGGCGGAGATGAAGGAGGCGGCGCCGCCGAGGGACT
                      ____________________________________________________________
consensus             ACGCGACGTTGAAGCCTTCGAGCACGGCGGAGATGAAGGAGGCGGCGCCGCCGAGGGACT
 
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JMFS106D08+           CGGCAATGACGCCGCCGTCTTTGATCAGAACATCATGGCAGCAATTCCCGACGACGAGGC
JMFF046L13+           CGGCAATGACGCCGCCGTCTTTGATCAGAACATCATGGCAGCAATTCCCGACGACGAGGC
JMSF036H11+           CGGCAATGACGCCGCCGTCTTTGATCAGAACATCATGGCAGCAATTCCCGACGACGAGGC
JMFF043A20+           CGGCAATGACGCCGCCGTCTTTGATCAGAACATCATGGCAGCAATTCCCGACGACGAGGC
rJMFF043A20-          CGGCAATGACGCCGCCGTCTTTGATCAGAACATCATGGCAGCAATTCCCGACGACGAGGC
JMSF026L09+           CGGCAATGACGCCGCCGTCTTTGATCAGAACATCATGGCAGCAATTCCCGACGACGAGGC
                      ____________________________________________________________
consensus             CGGCAATGACGCCGCCGTCTTTGATCAGAACATCATGGCAGCAATTCCCGACGACGAGGC
 
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JMFS106D08+           ACGAGCGGCGAGCGGCGCCGGGCGAAGACGGCTCCTTCGTTTCTCCGACCATGTTTGCGG
JMFF046L13+           ACGAGCGGCGAGCGGCGCCGGGCGAAGACGGCTCCTTCGTTTCTCCGACCATGTTTGCGG
JMSF036H11+           ACGAGCGGCGAGCGGCGCCGGGCGAAGACGGCTCCTTCGTTTCTCCGACCATGTTTGCGG
JMFF043A20+           ACGAGCGGCGAGCGGCGCCGGGCGAAGACGGCTCCTTCGTTTCTCCGACCATGTTTGCGG
rJMFF043A20-          ACGAGCGGCGAGCGGCGCCGGGCGAAGACGGCTCCTTCGTTTCTCCGACCATGTTTGCGG
JMSF026L09+           ACGAGCGGCGAGCGGCGCCGGGCGAAGACGGCTCCTTCGTTTCTCCGACCATGTTTGCGG
                      ____________________________________________________________
consensus             ACGAGCGGCGAGCGGCGCCGGGCGAAGACGGCTCCTTCGTTTCTCCGACCATGTTTGCGG
 
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JMFS106D08+           TTTAAGGGCGGAGAAAGCGAGGTTATCGGGACTTCCGGGTGGCGAGAAGAGATCATCGGC
JMFF046L13+           TTTAAGGGCGGAGAAAGCGAGGTTATCGGGACTTCCGGGTGGCGAGAAGAGATCATCGGC
JMSF036H11+           TTTAAGGGCGGAGAAAGCGAGGTTATCGGGACTTCCGGGTGGCGAGAAGAGATCATCGGC
JMFF043A20+           TTTAAGGGCGGAGAAAGCGAGGTTATCGGGACTTCCGGGTGGCGAGAAGAGATCATCGGC
rJMFF043A20-          TTTAAGGGCGGAGAAAGCGAGGTTATCGGGACTTCCGGGTGGCGAGAAGAGATCATCGGC
JMSF026L09+           TTTAAGGGCGGAGAAAGCGAGGTTATCGGGACTTCCGGGTGGCGAGAAGAGATCATCGGC
                      ____________________________________________________________
consensus             TTTAAGGGCGGAGAAAGCGAGGTTATCGGGACTTCCGGGTGGCGAGAAGAGATCATCGGC
 
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JMFS106D08+           GATATGGGCACACAGAGGACACCAAAACTAAA                            
JMFF046L13+           GATATGGGCACACAGAGGACACCAAAACTAAAGCCATGA                     
JMSF036H11+           GATATGGGCACACAGAGGACACCAAAACTAAAGCCATGAC                    
JMFF043A20+           GATATGGGCACACAGAGGACACCAAAACTAAAGCCATGACAGCAAAGAGAAGATGAAGAC
rJMFF043A20-          GATATGGGCACACAGAGGACACCAAAACTAAAGCCATGACAGCAAAGAGAAGATGAAGAC
JMSF026L09+           GATATGGGCACACAGAGGACACCAAAACTAAAGCCATGACAGCAAAGAGAAGATGAAGAC
                      ____________________________________________________________
consensus             GATATGGGCACACAGAGGACACCAAAACTAAAGCCATGACAGCAAAGAGAAGATGAAGAC
 
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JMFF043A20+           AAAGCAGAGT                                                  
rJMFF043A20-          AAAGCAGAGT                                                  
JMSF026L09+           AAAGCAGAGTATGTAATCGTGTCAGCTGAAACCATTAGACGCGCGGCACCGCAATTCTGA
                      ____________________________________________________________
consensus             AAAGCAGAGTATGTAATCGTGTCAGCTGAAACCATTAGACGCGCGGCACCGCAATTCTGA
 
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JMSF026L09+           AATGCAAAAACTCGAATCTGATTCTTTTCCAGATGGGTGGCCGGAAGAGAACGGCCGGTC
                      ____________________________________________________________
consensus             AATGCAAAAACTCGAATCTGATTCTTTTCCAGATGGGTGGCCGGAAGAGAACGGCCGGTC