Contig 005111:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019K24Sequence347005111 (9)234008475 (5)gb|KJB70541.1|4e-33hypothetical protein B456_011G079800 [Gossypium raimondii]
JMSF002H03Sequence338005111 (9)
JMSF013J01Sequence348005111 (9)322008475 (5)gb|KJB70541.1|2e-55hypothetical protein B456_011G079800 [Gossypium raimondii]
JMSF013J09Sequence350005111 (9)603008475 (5)gb|EYU21599.1|4e-81hypothetical protein MIMGU_mgv1a009096mg [Erythranthe guttata]
JMSF016L11Sequence348005111 (9)302005111 (9)
JMSF018J08Sequence231005111 (9)347008475 (5)ref|XP_011040004.1|3e-59PREDICTED: serine-threonine kinase receptor-associated protein [Populus euphrat
JMSF026A20Sequence347005111 (9)566008475 (5)gb|EYU21599.1|1e-64hypothetical protein MIMGU_mgv1a009096mg [Erythranthe guttata]
JMSF042G21Sequence347005111 (9)

Alignment

This contig is upended


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JMSF013J01+                      TTTTTTTNTNATATATGCGGAACAACAATGAAAAATCTCGATTAGAAAT
JMFF019K24+                                ATATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
JMSF002H03+                                  ATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
JMSF013J09+                                  ATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
JMSF042G21+                      TTTTTTTTTTATATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
JMSF016L11+                      TTTTTTTTTTATATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
rJMSF016L11-                                                                   AAT
JMSF026A20+                      TTTTTTTTTNATATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
                      ____________________________________________________________
consensus                        TTTTTTTTTTATATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
 
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JMSF013J01+           TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
JMFF019K24+           TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
JMSF002H03+           TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
JMSF013J09+           TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
JMSF042G21+           TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGGTATAGATATAGAAATAGAAATA
JMSF016L11+           TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
rJMSF016L11-          TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
JMSF026A20+           TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
                      ____________________________________________________________
consensus             TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
 
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JMSF013J01+           TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMFF019K24+           TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMSF002H03+           TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMSF013J09+           TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMSF042G21+           TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMSF016L11+           TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
rJMSF016L11-          TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMSF018J08+                   TGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMSF026A20+           TATGTATCTGCCTATAATAAAGTGTATATATTA-GGGAAATGGCGCGACCGATTATCAAA
                      ____________________________________________________________
consensus             TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
 
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JMSF013J01+           GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMFF019K24+           GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMSF002H03+           GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMSF013J09+           GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMSF042G21+           GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMSF016L11+           GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
rJMSF016L11-          GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMSF018J08+           GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMSF026A20+           GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
                      ____________________________________________________________
consensus             GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
 
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JMSF013J01+           CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMFF019K24+           CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMSF002H03+           CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMSF013J09+           CTCAAGACGATGGATAGATCNGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMSF042G21+           CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMSF016L11+           CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
rJMSF016L11-          CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMSF018J08+           CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMSF026A20+           CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
                      ____________________________________________________________
consensus             CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
 
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JMSF013J01+           AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCC 
JMFF019K24+           AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGC  
JMSF002H03+           AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGC  
JMSF013J09+           AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGC  
JMSF042G21+           AAATTAAAAAG-AAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCC 
JMSF016L11+           AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCC 
rJMSF016L11-          AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCC 
JMSF018J08+           AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCC 
JMSF026A20+           AAATTAAAAAG-AAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCCA
                      ____________________________________________________________
consensus             AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCCA