Contig 005110:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025O16Sequence680005110 (3)ref|XP_009782539.1|6e-108PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like767013980 (3)ref|XP_009782540.1|9e-111PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like
JMSF026O16Sequence211005110 (3)ref|XP_009782539.1|2e-34PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like718013980 (3)ref|XP_009782540.1|4e-101PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like
JMSF050H08Sequence673005110 (3)ref|XP_009782539.1|5e-72PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like806013980 (3)ref|XP_009782540.1|3e-103PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like

Alignment

This contig is upended


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JMSF050H08+                                     GCACTACATTGAACTTGTAGTTAGATTGAGCAGT
JMSF025O16+                                                   TTGTAGTTAGATTGAGCAGT
                      ____________________________________________________________
consensus                                       GCACTACATTGAACTTGTAGTTAGATTGAGCAGT
 
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JMSF050H08+           AGCATTCATAGTAGCAGCGGCATTACCATGATAACCATTCCTGATTGAAATAACATCGTG
JMSF025O16+           AGCATTCATAGTAGCAGCGGCATTACCATGATAACCATTCCTGATTGAAATAACATCGTG
                      ____________________________________________________________
consensus             AGCATTCATAGTAGCAGCGGCATTACCATGATAACCATTCCTGATTGAAATAACATCGTG
 
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JMSF050H08+           ACAGCCAGTATACAACCTCGTCATTAGCAAAGCCAGTTCATTGGCCTCTGTCCCAGAATT
JMSF025O16+           ACAGCCAGTATACAACCTCGTCATTAGCAAAGCCAGTTCATTGGCCTCTGTCCCAGAATT
                      ____________________________________________________________
consensus             ACAGCCAGTATACAACCTCGTCATTAGCAAAGCCAGTTCATTGGCCTCTGTCCCAGAATT
 
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JMSF050H08+           CGTAAAGTAAACAACCTTGAGATCTCCAGGCATCTTGGAGGCAAGTGCTTCGGCAAAATC
JMSF025O16+           CGTAAAGTAAACAACCTTGAGATCTCCAGGCATCTTGGAGGCAAGTGCTTCGGCAAAATC
                      ____________________________________________________________
consensus             CGTAAAGTAAACAACCTTGAGATCTCCAGGCATCTTGGAGGCAAGTGCTTCGGCAAAATC
 
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JMSF050H08+           AGCTATGGTGTGATTGAGATACAACACGGTGGAATGTTGGAGGCGCTTTGTTTGGTTCAC
JMSF026O16+                                     CGGTGGAATGTTGGAGGCGCTTTGTNTGGTTCAC
JMSF025O16+           AGCTATGGTGTGATTGAGATACAACACGGTGGAATGTTGGAGGCGCTTTGTTTGGTTCAC
                      ____________________________________________________________
consensus             AGCTATGGTGTGATTGAGATACAACACGGTGGAATGTTGGAGGCGCTTTGTTTGGTTCAC
 
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JMSF050H08+           CACCGCCTCCACCACCTCCGGGTGGCAGTGGCCGCAACACACGGTGGCGATCCCGCCAAA
JMSF026O16+           CACCGCCTCCACCACNTCCGGGTGGCAGTGGCCGCAACACACGGTGGCGATCCCGCCAAA
JMSF025O16+           CACCGCCTCCACCACCTCCGGGTGGCAGTGGCCGCAACACACGGTGGCGATCCCGCCAAA
                      ____________________________________________________________
consensus             CACCGCCTCCACCACCTCCGGGTGGCAGTGGCCGCAACACACGGTGGCGATCCCGCCAAA
 
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JMSF050H08+           TGCATCCAGATACCGACGCCCATT-TCGTCGAACAAGTACTGCATCTTCCCATCCACCAA
JMSF026O16+           TGCATCCAGATACCGACGCCCATTCTCGTCGAACAANTANTGCATCTTCCCATCCACCAA
JMSF025O16+           TGCATCCAGATACCGACGCCCATTCTCGTCGAACAAGTACTGCATCTTCCCATCCACCAA
                      ____________________________________________________________
consensus             TGCATCCAGATACCGACGCCCATTCTCGTCGAACAAGTACTGCATCTTCCCATCCACCAA
 
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JMSF050H08+           ATTCAACGGGTTCTTGAAGAAATGGAAGATGGCGGGGCTGAGGTAACGCTGGCGTTTCTG
JMSF026O16+           ATTCAACGGGTTCTTGAAGAAATGGAAGATGGCGGGGCTGAGGTAACGCTGGCGT     
JMSF025O16+           ATTCAACGGGTTCTTGAAGAAATGGAAGATGGCGGGGCTGAGGTAACGCTGGCGTTTCTG
                      ____________________________________________________________
consensus             ATTCAACGGGTTCTTGAAGAAATGGAAGATGGCGGGGCTGAGGTAACGCTGGCGTTTCTG
 
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JMSF050H08+           AAGCACCTCGGCGGCTGAGGGGCCGGTGTACGGAGGCGGAGAGTAGTGGAAGGGGGGCAT
JMSF025O16+           AAGCACCTCGGCGGCTGAGGGGCCGGTGTACGGAGGCGGAGAGTAGTGGAAGGGGGGCAT
                      ____________________________________________________________
consensus             AAGCACCTCGGCGGCTGAGGGGCCGGTGTACGGAGGCGGAGAGTAGTGGAAGGGGGGCAT
 
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JMSF050H08+           TTTGGGGAGCAATGAGTCAAGAGACTCGTCGGACTGCGCGGCGGTGGCGAATGGCCGGTG
JMSF025O16+           TTTGGGGAGCAATGAGTCAAGAGACTCGTCGGACTGCGCGGCGGTGGCGAATGGCCGGTG
                      ____________________________________________________________
consensus             TTTGGGGAGCAATGAGTCAAGAGACTCGTCGGACTGCGCGGCGGTGGCGAATGGCCGGTG
 
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JMSF050H08+           AATCAACGGTGAACCTCTCGCTGATAATGCCCTCCGCCCTGATACGATAAATCTCTTCAT
JMSF025O16+           AATCAACGGTGAACCTCTCGCTGATAATGCCCTCCGCCCTGATACGATAAATCTCTTCAT
                      ____________________________________________________________
consensus             AATCAACGGTGAACCTCTCGCTGATAATGCCCTCCGCCCTGATACGATAAATCTCTTCAT
 
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JMSF050H08+           TTTTCGGATTGAGAATACTTTCGCTCTCCGCGCTACTC                      
JMSF025O16+           TTTTCGGATTGAGAATACTTTCGCTCTCCGCGCTACTCTGAGATTGCAGAGATTAACATC
                      ____________________________________________________________
consensus             TTTTCGGATTGAGAATACTTTCGCTCTCCGCGCTACTCTGAGATTGCAGAGATTAACATC