Contig 005107:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS108C02+               AGTAGTGGGCAAGTTGTTGATATNTGAGTCATCAGCTACAACACCCATCTGCCTGT
                      ____________________________________________________________
consensus                 AGTAGTGGGCAAGTTGTTGATATNTGAGTCATCAGCTACAACACCCATCTGCCTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS108C02+           TAAGTTCTTGTTTGGCATTTTCTAACTTCTCGCATGCTAAGAAATATTCTTCTGGGTCCT
JMSF025J01+                                CTAACTTCTCGCATGCTAAGAAATATTCTTCTGGGTCNT
                      ____________________________________________________________
consensus             TAAGTTCTTGTTTGGCATTTTCTAACTTCTCGCATGCTAAGAAATATTCTTCTGGGTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS108C02+           GAAGTTTATCAACGTCCAAACTTGATTGCAAGCTAATGTTAGGCTGACTAGTATCAGGCT
JMSF025J01+           GAAGTTTATCAACGTCCAAACTTGATTGCAAGCTAATGTTAGGCTGACTAGTATCAGGCT
                      ____________________________________________________________
consensus             GAAGTTTATCAACGTCCAAACTTGATTGCAAGCTAATGTTAGGCTGACTAGTATCAGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS108C02+           TCATAGAAAATCGAGCCCTTTTCCGGCCAAGTCCTGGCCTTCGCTCTCGAGGCATCTCCT
JMSF025J01+           TCATAGAAAATCGAGCCCTTTTCCGGCCAAGTCCTGGCCTTCGCTCTCGAGGCATCTCCT
                      ____________________________________________________________
consensus             TCATAGAAAATCGAGCCCTTTTCCGGCCAAGTCCTGGCCTTCGCTCTCGAGGCATCTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS108C02+           TTTCCACCTTTGCAGCAACATGATCATCTAAATCCAAAGATGCCTTAAATCTTGGAAAAT
JMSF025J01+           TTTCCACCTTTGCAGCAACATGATCATCTAAATCCAAAGATGCCTTAAATCTTGGAAAAT
                      ____________________________________________________________
consensus             TTTCCACCTTTGCAGCAACATGATCATCTAAATCCAAAGATGCCTTAAATCTTGGAAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS108C02+           TAGCATTCAGAATCTCTGAACCATTATCAACAATGGCCTTCGACTCTTCTAGAAGCTTTT
JMSF025J01+           TAGCATTCAGAATCTCTGAACCATTATCAACAATGGCCTTCGACTCTTCTAGAAGCTTTT
                      ____________________________________________________________
consensus             TAGCATTCAGAATCTCTGAACCATTATCAACAATGGCCTTCGACTCTTCTAGAAGCTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS108C02+           CAGCATTCCTTAGTCCCATAGACTTCATTAATTGGTGAATTGAGTTGAGGTTGTTCGGTT
JMSF025J01+           CAGCATTCCTTAGTCCCATAGACTTCATTAATTGGTGAATNGAGTTGAGGTTGTTCGGTT
                      ____________________________________________________________
consensus             CAGCATTCCTTAGTCCCATAGACTTCATTAATTGGTGAATTGAGTTGAGGTTGTTCGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS108C02+           CAGAAGGAATTGAATCTTCAGACTGAACCCTAATTGTTTGGGGTAAAAGAGGGAGCCCGG
JMSF025J01+           CAGAAGGAATTGAATCTTCAGACTGAACCCTAATTGTTTGGGGTAAAAGAGGGAGCCCGG
                      ____________________________________________________________
consensus             CAGAAGGAATTGAATCTTCAGACTGAACCCTAATTGTTTGGGGTAAAAGAGGGAGCCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS108C02+           CGAAGGCACGGAGCGGGTCGGGTGGATCCATTGTCAGAGGCTCAGTTGTCATCTTCCCAT
JMSF025J01+           CGAAGGCACGGAGCGGGTCGGGTGGATCCATTGTCAGAGGCTCAGTTGTCATCTTCCCAT
                      ____________________________________________________________
consensus             CGAAGGCACGGAGCGGGTCGGGTGGATCCATTGTCAGAGGCTCAGTTGTCATCTTCCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS108C02+           AAGAACTTCAAATCCTGAGCTAAGAGCGTAATCTGAAGGATCTTTTGCGCGAGAAGCCGA
JMSF025J01+           AAGAACTTCAAATCCTGAGCTAAGAGCGTAATCTGAAGGATCTTTTGCGCGAGAAGCCGA
                      ____________________________________________________________
consensus             AAGAACTTCAAATCCTGAGCTAAGAGCGTAATCTGAAGGATCTTTTGCGCGAGAAGCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS108C02+           ACGTGAGGAGTGAGGAGT                                          
JMSF025J01+           ACGTGAGGAGTGAGGAGTGAGGAGTGAGGGGGACTGAGGATTCGGGCAAAATTTGAAACC
                      ____________________________________________________________
consensus             ACGTGAGGAGTGAGGAGTGAGGAGTGAGGGGGACTGAGGATTCGGGCAAAATTTGAAACC