Contig 005106:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017P11Sequence459005106 (4)747012581 (4)emb|CDO97619.1|1e-61unnamed protein product [Coffea canephora]
JMSF025H03Sequence608005106 (4)ref|XP_009598695.1|6e-08PREDICTED: MACPF domain-containing protein At4g24290 [Nicotiana tomentosiformis775012581 (4)emb|CDO97619.1|4e-70unnamed protein product [Coffea canephora]
JMSF028N22Sequence660005106 (4)ref|XP_009782294.1|2e-20PREDICTED: MACPF domain-containing protein At4g24290 [Nicotiana sylvestris] ref654012581 (4)emb|CDO97619.1|4e-65unnamed protein product [Coffea canephora]
JMSF030I24Sequence647005106 (4)ref|XP_009782294.1|2e-17PREDICTED: MACPF domain-containing protein At4g24290 [Nicotiana sylvestris] ref664012581 (4)emb|CDO97619.1|1e-40unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF028N22+ CCTTTATCACATTTGATGGACTTGG
JMSF030I24+ TGATGGACTTGG
                      ____________________________________________________________
consensus CCTTTATCACATTTGATGGACTTGG
 
. : . : . : . : . : . :
JMSF028N22+ GTACATCGGGGACCAAAATCCCACCAGGAAGAACAATCTCTTGGCCCTTATCCTCGTCAA
JMSF030I24+ GTACATCGGGGACCAAAATCCCACCAGGAAGAACAATCTCTTGGCCCTTATCCTCGTCAA
JMSF025H03+ CTCGTCAA
                      ____________________________________________________________
consensus GTACATCGGGGACCAAAATCCCACCAGGAAGAACAATCTCTTGGCCCTTATCCTCGTCAA
 
. : . : . : . : . : . :
JMSF028N22+ TCTCAATCAAACGCCGACTACATGGATCCCCTTTGCAATATTTAAGCCGCAAGTCCAAGG
JMSF030I24+ TCTCAATCAAACGCCGACTACATGGATCCCCTTTGCAATATTTAAGCCGCAAGTCCAAGG
JMSF025H03+ TCTCAATCAAACGCCGACTACATGGATCCCCTTTGCAATATTTAAGCCGCAAGTCCAAGG
                      ____________________________________________________________
consensus TCTCAATCAAACGCCGACTACATGGATCCCCTTTGCAATATTTAAGCCGCAAGTCCAAGG
 
. : . : . : . : . : . :
JMSF028N22+ ATATATCATACCCGCATCCTATCGACAGAATGGCTGCCTTGGCTGCTTCGGCAGCTGGAA
JMSF030I24+ ATATATCATACCCGCATCCTATCGACAGAATGGCTGCCTTGGCTGCTTCGGCAGCTGGAA
JMSF025H03+ ATATATCATACCCGCATCCTATCGACAGAATGGCTGCCTTGGCTGCTTCGGCAGCTGGAA
                      ____________________________________________________________
consensus ATATATCATACCCGCATCCTATCGACAGAATGGCTGCCTTGGCTGCTTCGGCAGCTGGAA
 
. : . : . : . : . : . :
JMSF028N22+ GCTTTAGTGCCATTGTTCAGAAAACCACTCCCAAATTACTCATGAATATTTCTACTCAAA
JMSF030I24+ GCTTTAGTGCCATTGTTCAGAAAACCACTCCCAAATTACTCATGAATATTTCTACTCAAA
JMSF017P11+ CCACTCCCAAATTACTCATGAATATTTCTACTCAAA
JMSF025H03+ GCTTTAGTGCCATTGTTCAGAAAACCACTCCCAAATTACTCATGAATATTTCTACTCAAA
                      ____________________________________________________________
consensus GCTTTAGTGCCATTGTTCAGAAAACCACTCCCAAATTACTCATGAATATTTCTACTCAAA
 
. : . : . : . : . : . :
JMSF028N22+ GATTCCCCCTTTTAAGCTTGAAACTAAACTAAACTACAGTTGGCACAACAATCCAATCAA
JMSF030I24+ GATTCCCCCTTTTAAGCTTGAAACTAAACTAAACTACAGTTGGCACAACAATCCAATCAA
JMSF017P11+ GATTCCCCCTTTTAAGCTTGAAACTAAACTAAACTACAGTTGGCACAACAATCCAATCAA
JMSF025H03+ GATTCCCCCTTTTAAGCTTGAAACTAAACTAAACTACAGTTGGCACAACAATCCAATCAA
                      ____________________________________________________________
consensus GATTCCCCCTTTTAAGCTTGAAACTAAACTAAACTACAGTTGGCACAACAATCCAATCAA
 
. : . : . : . : . : . :
JMSF028N22+ TTATAGTAGCATCGGGGTGGGAAAAATGGGAATTGTAAACCAACGGAAAATCCTAAAAAA
JMSF030I24+ TTATAGTAGCATCGGGGTGGGAAAAATGGGAATTGTAAACCAACGGAAAATCCTAAAAAA
JMSF017P11+ TTATAGTAGCATCGGGGTGGGAAAAATGGGAATTGTAAACCAACGGAAAATCCTAAAAAA
JMSF025H03+ TTATAGTAGCATCGGGGTGGGAAAAATGGGAATTGTAAACCAACGGAAAATCCTAAAAAA
                      ____________________________________________________________
consensus TTATAGTAGCATCGGGGTGGGAAAAATGGGAATTGTAAACCAACGGAAAATCCTAAAAAA
 
. : . : . : . : . : . :
JMSF028N22+ AATTCCACTGCTCCTTTTTACCGGATTCCGCCGCACCCAAGTCAGATACAGAGTTGACTG
JMSF030I24+ AATTCCACTGCTCCTTTTTACCGGATTCCGCCGCACCCAAGTCAGATACAGAGTTGACTG
JMSF017P11+ AATTCCACTGCTCCTTTTTACCGGATTCCGCCGCACCCAAGTCAGATACAGAGTTGACTG
JMSF025H03+ AATTCCACTGCTCCTTTTTACCGGATTCCGCCGCACCCAAGTCAGATACAGAGTTGACTG
                      ____________________________________________________________
consensus AATTCCACTGCTCCTTTTTACCGGATTCCGCCGCACCCAAGTCAGATACAGAGTTGACTG
 
. : . : . : . : . : . :
JMSF028N22+ CACAGAAATTCGGCCACAAAACCCTAGAGCCTCGGCCGTACAAAATGCACATGAAACCGC
JMSF030I24+ CACAGAAATTCGGCCACAAAACCCTAGAGCCTCGGCCGTACAAAATGCACATGAAACCGC
JMSF017P11+ CACAGAAATTCGGCCACAAAACCCTAGAGCCTCGGCCGTACAAAATGCACATGAAACCGC
JMSF025H03+ CACAGAAATTCGGCCACAAAACCCTAGAGCCTCGGCCGTACAAAATGCACATGAAACCGC
                      ____________________________________________________________
consensus CACAGAAATTCGGCCACAAAACCCTAGAGCCTCGGCCGTACAAAATGCACATGAAACCGC
 
. : . : . : . : . : . :
JMSF028N22+ GAGCCTTTTATAATTTTGAACTCGCACGAGCTCGAACCTCTACCCGCTATGAGCTGATGA
JMSF030I24+ GAGCCTTTTATAATTTTGAACTCGCACGAGCTCGAACCTCTACCCGCTATGAGCTGATGA
JMSF017P11+ GAGCCTTTTATAATTTTGAACTCGCACGAGCTCGAACCTCTACCCGCTATGAGCTGATGA
JMSF025H03+ GAGCCTTTTATAATTTTGAACTCGCACGAGCTCGAACCTCTACCCGCTATGAGCTGATGA
                      ____________________________________________________________
consensus GAGCCTTTTATAATTTTGAACTCGCACGAGCTCGAACCTCTACCCGCTATGAGCTGATGA
 
. : . : . : . : . : . :
JMSF028N22+ GATTGAGGATATAATTCAGCTCAGATCTAGAGAGATAATGCATCGGCGGAGGGTTGGAGG
JMSF030I24+ GATTGAGGATATAATTCAGCTCAGATCTAGAGAGATAATGCATCGGCGGAGGGTTGGAGG
JMSF017P11+ GATTGAGGATATAATTCAGCTCAGATCTAGAGAGATAATGCATCGGCGGAGGGTTGGAGG
JMSF025H03+ GATTGAGGATATAATTCAGCTCAGATCTAGAGAGATAATGCATCGGCGGAGGGTTGGAGG
                      ____________________________________________________________
consensus GATTGAGGATATAATTCAGCTCAGATCTAGAGAGATAATGCATCGGCGGAGGGTTGGAGG
 
. : . : . : . : . : . :
JMSF028N22+ TTGGGAGACTCCAAGTCGTGTCGAATTGAGTGGC
JMSF030I24+ TTGGGAGACTCCAAGTCGTGTCGAATTGAGTGGC
JMSF017P11+ TTGGGAGACTCCAAGTCGTGTCGAATTGAGTGGCAAACAGCACGGTCATAGAGACC
JMSF025H03+ TTGGGAGACTCCAAGTCGTGTCGAATTGAGTGGCAAACAGCACGGTCATAGAGACCTTTC
                      ____________________________________________________________
consensus TTGGGAGACTCCAAGTCGTGTCGAATTGAGTGGCAAACAGCACGGTCATAGAGACCTTTC