Contig 005105:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031F05Sequence565005105 (4)ref|XP_006364388.1|1e-91PREDICTED: probable 1-aminocyclopropane-1-carboxylate deaminase-like isoform X1779012380 (4)emb|CDO98623.1|3e-104unnamed protein product [Coffea canephora]
JMFF036P22Sequence565005105 (4)ref|XP_006364388.1|8e-101PREDICTED: probable 1-aminocyclopropane-1-carboxylate deaminase-like isoform X1741012380 (4)emb|CDO98623.1|1e-100unnamed protein product [Coffea canephora]
JMSF010N24Sequence314005105 (4)ref|XP_006364388.1|5e-43PREDICTED: probable 1-aminocyclopropane-1-carboxylate deaminase-like isoform X1752012380 (4)emb|CDO98623.1|2e-125unnamed protein product [Coffea canephora]
JMSF025D18Sequence671005105 (4)ref|XP_006364388.1|4e-113PREDICTED: probable 1-aminocyclopropane-1-carboxylate deaminase-like isoform X1763012380 (4)emb|CDO98623.1|2e-100unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF025D18+ TCNTCCAACAG
                      ____________________________________________________________
consensus TCNTCCAACAG
 
. : . : . : . : . : . :
JMFF036P22+ TTTCAATATGTTAGCAAGAG
JMSF025D18+ GTATGACATAGGGCTTTCTCCCTTCGTGCAACAATTTTTCTTTCAATATGTTAGCAAGAG
                      ____________________________________________________________
consensus GTATGACATAGGGCTTTCTCCCTTCGTGCAACAATTTTTCTTTCAATATGTTAGCAAGAG
 
. : . : . : . : . : . :
JMFF031F05+ AAACAAGATCAATGTGAGCTCCAACTA
JMFF036P22+ CCACACTGCCAACTTTTGCATATTCTTCTTTTGAAACAAGATCAATGTGAGCTCCAACTA
JMSF025D18+ CCACACTGCCAACTTTTGCATATTCTTCTTTTGAAACAAGATCAATGTGAGCTCCAACTA
                      ____________________________________________________________
consensus CCACACTGCCAACTTTTGCATATTCTTCTTTTGAAACAAGATCAATGTGAGCTCCAACTA
 
. : . : . : . : . : . :
JMFF031F05+ AGCGCTCAACAAGGAGATTCCCTGTCAATCCTGGATCTTTATCCACAAGGACCTTGGAAG
JMFF036P22+ AGCGCTCAACAAGGAGATTCCCTGTCAATCCTGGATCTTTATCCACAAGGACCTTGGAAG
JMSF025D18+ AGCGCTCAACAAGGAGATTCCCTGTCAATCCTGGATCTTTATCCACAAGGACCTTGGAAG
                      ____________________________________________________________
consensus AGCGCTCAACAAGGAGATTCCCTGTCAATCCTGGATCTTTATCCACAAGGACCTTGGAAG
 
. : . : . : . : . : . :
JMFF031F05+ TTCGCAGTATAAGATAACAGTCAAGGTTCAAATACTTGGCAGCAACAGCAGTAGCACGGC
JMFF036P22+ TTCGCAGTATAAGATAACAGTCAAGGTTCAAATACTTGGCAGCAACAGCAGTAGCACGGC
JMSF025D18+ TTCGCAGTATAAGATAACAGTCAAGGTTCAAATACTTGGCAGCAACAGCAGTAGCACGGC
                      ____________________________________________________________
consensus TTCGCAGTATAAGATAACAGTCAAGGTTCAAATACTTGGCAGCAACAGCAGTAGCACGGC
 
. : . : . : . : . : . :
JMFF031F05+ AATGATTACTTTGAATGCCGCCTAAAGTGATAATGCAGTCTGCTCCCTGTGCCACAGCAT
JMSF010N24+ CCTGTGCCACAGCAT
JMFF036P22+ AATGATTACTTTGAATGCCGCCTAAAGTGATAATGCAGTCTGCTCCCTGTGCCACAGCAT
JMSF025D18+ AATGATTACTTTGAATGCCGCCTAAAGTGATAATGCAGTCTGCTCCCTGTGCCACAGCAT
                      ____________________________________________________________
consensus AATGATTACTTTGAATGCCGCCTAAAGTGATAATGCAGTCTGCTCCCTGTGCCACAGCAT
 
. : . : . : . : . : . :
JMFF031F05+ CTGCCATCAAGAATTCCAGTTTCCTCACCTTGTTACCACTCAACTGCATTCCTGAAAGAT
JMSF010N24+ CTGCCATCAAGAATTCCAGTTTCCTCACCTTGTTACCACTCAACTGCATTCCTGAAAGAT
JMFF036P22+ CTGCCATCAAGAATTCCAGTTTCCTCACCTTGTTACCACTCAACTGCATTCCTGAAAGAT
JMSF025D18+ CTGCCATCAAGAATTCCAGTTTCCTCACCTTGTTACCACTCAACTGCATTCCTGAAAGAT
                      ____________________________________________________________
consensus CTGCCATCAAGAATTCCAGTTTCCTCACCTTGTTACCACTCAACTGCATTCCTGAAAGAT
 
. : . : . : . : . : . :
JMFF031F05+ CATCACGCTTCAACCAGACCTCGGTGTTTGTAGGCAGATTGGGCAAGTTCCATATGTGAA
JMSF010N24+ CATCACGCTTCAACCAGACCTCGGTGTTTGTAGGCAGATTGGGCAAGTTCCATATGTGAA
JMFF036P22+ CATCACGCTTCAACCAGACCTCGGTGTTTGTAGGCAGATTGGGCAAGTTCCATATGTGAA
JMSF025D18+ CATCACGCTTCAACCAGACCTCGGTGTTTGTAGGCAGATTGGGCAAGTTCCATATGTGAA
                      ____________________________________________________________
consensus CATCACGCTTCAACCAGACCTCGGTGTTTGTAGGCAGATTGGGCAAGTTCCATATGTGAA
 
. : . : . : . : . : . :
JMFF031F05+ TTGGAGTAGGAAAGTTTCCGAGGGAAAAGACGTCAGAGGGGACGGGGCTGAGAGAAGAAG
JMSF010N24+ TTGGAGTAGGAAAGTTTCCGAGGGAAAAGACGTCAGAGGGGACGGGGCTGAGAGAAGAAG
JMFF036P22+ TTGGAGTAGGAAAGTTTCCGAGGGAAAAGACGTCAGAGGGGACGGGGCTGAGAGAAGAAG
JMSF025D18+ TTGGAGTAGGAAAGTTTCCGAGGGAAAAGACGTCAGAGGGGACGGGGCTGAGAGAAGAAG
                      ____________________________________________________________
consensus TTGGAGTAGGAAAGTTTCCGAGGGAAAAGACGTCAGAGGGGACGGGGCTGAGAGAAGAAG
 
. : . : . : . : . : . :
JMFF031F05+ CCCAAGTAGGAGGCTGATAAGGCTTCTTGGTCAGAAATTGGAAAGGGTTTGATGCATCCT
JMSF010N24+ CCCAAGTAGGAGGCTGATAAGGCTTCTTGGTCAGAAATTGGAAAGGGTTTGATGCATCCT
JMFF036P22+ CCCAAGTAGGAGGCTGATAAGGCTTCTTGGTCAGAAATTGGAAAGGGTTTGATGCATCCT
JMSF025D18+ CCCAAGTAGGAGGCTGATAAGGCTTCTTGGTCAGAAATTGGAAAGGGTTTGATGCATCCT
                      ____________________________________________________________
consensus CCCAAGTAGGAGGCTGATAAGGCTTCTTGGTCAGAAATTGGAAAGGGTTTGATGCATCCT
 
. : . : . : . : . : . :
JMFF031F05+ CCATGATTGCTGCCTTCTTCTTGGTGTTTGCTACCGAAGAGTAATCGCAGCAAATTTGGC
JMSF010N24+ CCATGATTGCTGCCTTCTTCTTGGTGTTTGCTACCGAAGAGTAATCGCAGCAAATTT
JMFF036P22+ CCATGATTGCTGCCTTCTTCTTGGTGTTTGCTACCGAAGAGTAATCGCAGCAAATTT
JMSF025D18+ CCATGATTGCTGCCTTCTTCTTGGTGTTTGCTACCGAAGAGTAATCGCAGCAAATTTGGC
                      ____________________________________________________________
consensus CCATGATTGCTGCCTTCTTCTTGGTGTTTGCTACCGAAGAGTAATCGCAGCAAATTTGGC
 
. : . : . : . : . : . :
JMFF031F05+ TGCTCAGCTTTTGCTGTGTATTTTTTGTGCTCGAAATCACACAGCTGCAGTTGCTGCT
JMSF025D18+ TGCTCAGCTTTTGCTGTGTATTTTTTGTGCTCGAAATCACACAGCTGCAGTTGCTGCTCC
                      ____________________________________________________________
consensus TGCTCAGCTTTTGCTGTGTATTTTTTGTGCTCGAAATCACACAGCTGCAGTTGCTGCTCC