Contig 005102:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS117A01+                                               TAAAGAATCAGTCACATTAGAAGT
JMSF024N23+                                            GACTAAAGAATCAGTCACATTAGAAGT
                      ____________________________________________________________
consensus                                              GACTAAAGAATCAGTCACATTAGAAGT
 
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JMFS117A01+           CGATGTAGTGAGATGGGGAGATTCAACTTCATTAACTAGGCTTCCCACTGAACCATTTTG
JMFS124A11+                                     CTTCATTAACTAGGCTTCCCACTGAACCATTTTG
JMSF024N23+           CGATGTAGTGAGATGGGGAGATTCAACTTCATTAACTAGGCTTCCCACTGAACCATTTTG
                      ____________________________________________________________
consensus             CGATGTAGTGAGATGGGGAGATTCAACTTCATTAACTAGGCTTCCCACTGAACCATTTTG
 
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JMFS117A01+           ACTGAATTGCATCACTCCCACGACAGTTTTGTGCTCATGGCTGATTTCTGCCATTTCCCT
JMFS124A11+           ACTGAATTGCATCACTCCCACGACAGTTTTGTGCTCATGGCTGATTTCTGCCATTTCCCT
JMSF024N23+           ACTGAATTGCATCACTCCCACGACAGTTTTGTGCTCATGGCTGATTTCTGCCATTTCCCT
                      ____________________________________________________________
consensus             ACTGAATTGCATCACTCCCACGACAGTTTTGTGCTCATGGCTGATTTCTGCCATTTCCCT
 
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JMFS117A01+           TGACAAATTACCATCAGCTTTCACCTCCCATGTGTGTGTAGGACGAAAAAATCCATCCAC
JMFS124A11+           TGACAAATTACCATCAGCTTTCACCTCCCATGTGTGTGTAGGACGAAAAAATCCATCCAC
JMSF024N23+           TGACAAATTACCATCAGCTTTCACCTCCCATGTGTGTGTAGGACGAAAAAATCCATCCAC
                      ____________________________________________________________
consensus             TGACAAATTACCATCAGCTTTCACCTCCCATGTGTGTGTAGGACGAAAAAATCCATCCAC
 
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JMFS117A01+           AATTAACCTCGCCTTATTTCTTATTTGTTGAAGAAATGCTACTGCTAGCTCACCTGGTGC
JMFS124A11+           AATTAACCTCGCCTTATTTCTTATTTGTTGAAGAAATGCTACTGCTAGCTCACCTGGTGC
JMSF024N23+           AATTAACCTCGCCTTATTTCTTATTTGTTGAAGAAATGCTACTGCTAGCTCACCTGGTGC
                      ____________________________________________________________
consensus             AATTAACCTCGCCTTATTTCTTATTTGTTGAAGAAATGCTACTGCTAGCTCACCTGGTGC
 
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JMFS117A01+           CTGTTCGGTATTGGGGCTCTTTCTAGAAACGCGTAAATATACAATTGTAAGAGCAGAGAT
JMFS124A11+           CTGTTCGGTATTGGGGCTCTTTCTAGAAACGCGTAAATATACAATTGTAAGAGCAGAGAT
JMSF024N23+           CTGTTCGGTATTGGGGCTCTTTCTAGAAACGCGTAAATATACAATTGTAAGAGCAGAGAT
                      ____________________________________________________________
consensus             CTGTTCGGTATTGGGGCTCTTTCTAGAAACGCGTAAATATACAATTGTAAGAGCAGAGAT
 
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JMFS117A01+           TGTGACGACTGCAGCGACGACGACGACCACCTGCGAGTCCAGGTAGGAGGCTACGGGGTG
JMFS124A11+           TGTGACGACTGCAGCGACGACGACGACCACCTGCGAGTCCAGGTAGGAGGCTACGGGGTG
JMSF024N23+           TGTGACGACTGCAGCGACGACGACGACCACCTGCGAGTCCAGGTAGGAGGCTACGGGGTG
                      ____________________________________________________________
consensus             TGTGACGACTGCAGCGACGACGACGACCACCTGCGAGTCCAGGTAGGAGGCTACGGGGTG
 
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JMFS117A01+           GAAGCCGGAAGAGTGAGAGCGGAACTGAAATCCAGAAAGTTTCCGACATCGCCGTCGCGA
JMFS124A11+           GAAGCCGGAAGAGTGAGAGCGGAACTGAAATCCAGAAAGTTTCCGACATCGCCGTCGCGA
JMSF024N23+           GAAGCCGGAAGAGTGAGAGCGGAACTGAAATCCAGAAAGTTTCCGACATCGCCGTCGCGA
                      ____________________________________________________________
consensus             GAAGCCGGAAGAGTGAGAGCGGAACTGAAATCCAGAAAGTTTCCGACATCGCCGTCGCGA
 
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JMFS117A01+           ACGAAGTCCCGGCGGCCTGAAGCTGCGAGTGGAACCGAGGAGGAAGTTGGTGCAGCGGCG
JMFS124A11+           ACGAAGTCCCGGCGGCCTGAAGCTGCGAGTGGAACCGAGGAGGAAGTTGGTGCAGCGGCG
JMSF024N23+           ACGAAGTCCCGGCGGCCTGAAGCTGCGAGTGGAACCGAGGAGGAAGTTGGTGCAGCGGCG
                      ____________________________________________________________
consensus             ACGAAGTCCCGGCGGCCTGAAGCTGCGAGTGGAACCGAGGAGGAAGTTGGTGCAGCGGCG
 
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JMFS117A01+           AGAAGAGAAATGGGAGGCGAGTGGAGCAAAAGAGACCAGAGAGAGTGTTTGAGGTTTGGA
JMFS124A11+           AGAAGAGAAATGGGAGGCGAGTGGAGCAAAAGAGACCAGAGAGAGTGTTTGAGGTTTGGA
JMSF024N23+           AGAAGAGAAATGGGAGGCGAGTGGAGCAAAAGAGACCAGAGAGAGTGTTTGAGGTTTGGA
                      ____________________________________________________________
consensus             AGAAGAGAAATGGGAGGCGAGTGGAGCAAAAGAGACCAGAGAGAGTGTTTGAGGTTTGGA
 
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JMFS117A01+           AGAGAAGGTAGTGGCCATGGAGATGGAGAATTGGAAGGTGAGGGAGTGTGAGTGTG    
JMFS124A11+           AGAGAAGGTAGTGGCCATGGAGATGGAGAATTGGAAGGTGAGGGAGTGTGAGTGTG    
JMSF024N23+           AGAGAAGGTAGTGGCCATGGAGATGGAGAATTGGAAGGTGAGGGAGTGTGAGTGTGAGGC
                      ____________________________________________________________
consensus             AGAGAAGGTAGTGGCCATGGAGATGGAGAATTGGAAGGTGAGGGAGTGTGAGTGTGAGGC