Contig 005101:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019B16Sequence305005101 (2)800020361gb|KEH21381.1|1e-104aspartyl/asparaginyl-tRNA synthetase family protein [Medicago truncatula]
JMSF024L05Sequence648005101 (2)ref|XP_004230674.1|3e-71PREDICTED: aspartate--tRNA ligase, mitochondrial [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF024L05+                       TCATCAGCTGCAGTAACCAAGAATGGCAACTTCAAGTGTACTGCATTT
                      ____________________________________________________________
consensus                         TCATCAGCTGCAGTAACCAAGAATGGCAACTTCAAGTGTACTGCATTT
 
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JMSF024L05+           AACACATCTACATGCTCTGCTGCAACCTCTATCATGCCAGTCTTCATCTTCTTATTCACT
                      ____________________________________________________________
consensus             AACACATCTACATGCTCTGCTGCAACCTCTATCATGCCAGTCTTCATCTTCTTATTCACT
 
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JMSF024L05+           GATTCACCTGGCCGAGGCCTCACAACACCTTCCACAGCAACCACATACTCAAGTCTCAAA
                      ____________________________________________________________
consensus             GATTCACCTGGCCGAGGCCTCACAACACCTTCCACAGCAACCACATACTCAAGTCTCAAA
 
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JMSF024L05+           TCATTTACAGTCGAATGAGCCTGGGGGAATTCATCCGGAAGTGTAGTAATCTGAACAATT
                      ____________________________________________________________
consensus             TCATTTACAGTCGAATGAGCCTGGGGGAATTCATCCGGAAGTGTAGTAATCTGAACAATT
 
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JMSF024L05+           CCAGTGTGGTCTCTGAGGTTGAAAAAAGTGAGGCCACCGTGGACTCGATGGAGGGCGACC
                      ____________________________________________________________
consensus             CCAGTGTGGTCTCTGAGGTTGAAAAAAGTGAGGCCACCGTGGACTCGATGGAGGGCGACC
 
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JMSF019B16+                                                                  ATCGG
JMSF024L05+           CATCCGCAAAGCCGAACCCGTTTACCCACGTCGGATTCGGACAATTCGCCGGAGTATCGG
                      ____________________________________________________________
consensus             CATCCGCAAAGCCGAACCCGTTTACCCACGTCGGATTCGGACAATTCGCCGGAGTATCGG
 
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JMSF019B16+           GTGCGGGTGACCCATTTGAGCTGTCCACCGGATTGAATTGGAGGCTTCTTGGAATCTGTT
JMSF024L05+           GTGCGGGTGACCCATTTGAGCTGTCCACCGGATTGAATTGGAGGCTTCTTGGAATCTGTT
                      ____________________________________________________________
consensus             GTGCGGGTGACCCATTTGAGCTGTCCACCGGATTGAATTGGAGGCTTCTTGGAATCTGTT
 
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JMSF019B16+           TCTGCAGAAGGGAGTGAAGTAGAAGCTGAGACGGAGAGAGACGAAAGGGTGCGTTTTGGG
JMSF024L05+           TCTGCAGAAGGGAGTGAAGTAGAAGCTGAGACGGAGAGAGACGAAAGGGTGCGTTTTGGG
                      ____________________________________________________________
consensus             TCTGCAGAAGGGAGTGAAGTAGAAGCTGAGACGGAGAGAGACGAAAGGGTGCGTTTTGGG
 
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JMSF019B16+           AGCGGTGTGGGAATGAATAGGGGATTAACGTGGGCGAAGTAGAGCAGAGAAAAGGAAGCA
JMSF024L05+           AGCGGTGTGGGAATGAATAGGGGATTAACGTGGGCGAAGTAGAGCAGAGAAAAGGAAGCA
                      ____________________________________________________________
consensus             AGCGGTGTGGGAATGAATAGGGGATTAACGTGGGCGAAGTAGAGCAGAGAAAAGGAAGCA
 
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JMSF019B16+           AGAGGGGAAGGTTTGGAACGAAGGGCAATGGCGGGAAGTGAACGAAGAAGGAATATGGAC
JMSF024L05+           AGAGGGGAAGGTTTGGAACGAAGGGCAATGGCGGGAAGTGAACGAAGAAGGAATATGGAC
                      ____________________________________________________________
consensus             AGAGGGGAAGGTTTGGAACGAAGGGCAATGGCGGGAAGTGAACGAAGAAGGAATATGGAC
 
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JMSF019B16+           ATGGTGGACTGAGAGATGGTGAAGAGCGGTCCGAAGCTCACAGGATGGATAGAGTGAGTC
JMSF024L05+           ATGGTGGACTGAGAGATGGTGAAGAGCGGTCCGAAGCTCACAGGATGGATAGAGTGAGTC
                      ____________________________________________________________
consensus             ATGGTGGACTGAGAGATGGTGAAGAGCGGTCCGAAGCTCACAGGATGGATAGAGTGAGTC