Contig 005099:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024K11Sequence659005099 (3)ref|XP_009595392.1|1e-42PREDICTED: probable protein phosphatase 2C 58 [Nicotiana tomentosiformis]753005099 (3)ref|XP_009762144.1|7e-100PREDICTED: probable protein phosphatase 2C 58 [Nicotiana sylvestris]
JMSF053E17Sequence661005099 (3)ref|XP_009595392.1|5e-70PREDICTED: probable protein phosphatase 2C 58 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF024K11-                         ACTCAAACGTAGCAATGTAGCATTGATTCGGCTATGGATAGTTTC
                      ____________________________________________________________
consensus                            ACTCAAACGTAGCAATGTAGCATTGATTCGGCTATGGATAGTTTC
 
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rJMSF024K11-          CCCCCAAAAAAAATTTTGTACACATGCTATTAAATTCAGCTGAAAACTAACTTCAAACTA
                      ____________________________________________________________
consensus             CCCCCAAAAAAAATTTTGTACACATGCTATTAAATTCAGCTGAAAACTAACTTCAAACTA
 
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rJMSF024K11-          TAATCAATGGAACTTAACAACTATACATGATATATCATCCTTGCTTTTTCTAGCAACCGC
                      ____________________________________________________________
consensus             TAATCAATGGAACTTAACAACTATACATGATATATCATCCTTGCTTTTTCTAGCAACCGC
 
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rJMSF024K11-          GGCCTCTGCCAAATGCTTTGCCGCCGATTCTGCATCCTTAATGTTCTTGATTGCGTCCAC
                      ____________________________________________________________
consensus             GGCCTCTGCCAAATGCTTTGCCGCCGATTCTGCATCCTTAATGTTCTTGATTGCGTCCAC
 
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rJMSF024K11-          CGCCTCTTGATTCGTCATCACCTTCCATAGCCCGTCGCTTGCCAAAATGATGAAGTCAAC
                      ____________________________________________________________
consensus             CGCCTCTTGATTCGTCATCACCTTCCATAGCCCGTCGCTTGCCAAAATGATGAAGTCAAC
 
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rJMSF024K11-          GTCATCGTCTATCGACACCGTTTTCACATCTGGTTCTGAACTCAGGTGTCTTTTTAGGCT
                      ____________________________________________________________
consensus             GTCATCGTCTATCGACACCGTTTTCACATCTGGTTCTGAACTCAGGTGTCTTTTTAGGCT
 
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rJMSF024K11-          CTTGTCGCCAAATGCCCTGGCTACAGCCAACTGCCCATCAACTCGAGGGACATCACCTGG
                      ____________________________________________________________
consensus             CTTGTCGCCAAATGCCCTGGCTACAGCCAACTGCCCATCAACTCGAGGGACATCACCTGG
 
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rJMSF024K11-          AATGTTTGATACGAATCCACCCTTGCTTTCAATAATCGGCTTTTCTTTGTTTGGTTCATG
                      ____________________________________________________________
consensus             AATGTTTGATACGAATCCACCCTTGCTTTCAATAATCGGCTTTTCTTTGTTTGGTTCATG
 
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rJMSF024K11-          GTCAACTGAAAGCTGCTTGGCAGAACTTTTCCTGGAAATGACGGCCCGAGAATCTCCCAC
                      ____________________________________________________________
consensus             GTCAACTGAAAGCTGCTTGGCAGAACTTTTCCTGGAAATGACGGCCCGAGAATCTCCCAC
 
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rJMSF024K11-          ATTTGCAACTACAAGCCTTTCACCATTGATCAGTATTGCCGTAACTGCAGTTGAGCCTCC
JMSF053E17+                CAACTACAAGCCTTTCACCATTGATCAGTATTGCCGTAACTGCAGTTGAGCCTCC
                      ____________________________________________________________
consensus             ATTTGCAACTACAAGCCTTTCACCATTGATCAGTATTGCCGTAACTGCAGTTGAGCCTCC
 
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rJMSF024K11-          TTTCCCCAAGTGCATTGATTTCTCCAGTATATCTTTGTCGGTTGTATGATAAGCTCTCTT
JMSF053E17+           TTTCCCCAAGTGCATTGATTTCTCCAGTATATCTTTGTCGGTTGTATGATAAGCTCTCTT
JMSF024K11+           TTTCCCCAAGTGCATTGATTTCTCCAGTATATCTTTGTCGGTTGTATGATAAGCTCTCTT
                      ____________________________________________________________
consensus             TTTCCCCAAGTGCATTGATTTCTCCAGTATATCTTTGTCGGTTGTATGATAAGCTCTCTT
 
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rJMSF024K11-          TATTGCATTCTCAGTATCGCTCCAAAAGTCATGCTCTTTCAAAATA-TGTCAAAGAGGTG
JMSF053E17+           TATTGCATTCTCAGTATCGCTCCAAAAGTCATGCTCTTTCAAAATATTGTCAAAGAGGTG
JMSF024K11+           TATTGCATTCTCAGTATCGCTCCAAAAGTCATGCTCTTTCAAAATA-TGTCAAAGAGGTG
                      ____________________________________________________________
consensus             TATTGCATTCTCAGTATCGCTCCAAAAGTCATGCTCTTTCAAAATA-TGTCAAAGAGGTG
 
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rJMSF024K11-          GGATTGC-AGTACTGGGCAACATCATGGCCCATATGCCCATCAAAA              
JMSF053E17+           GGATTGCAAGTACTGGGCAACATCATGGCCCATATGCCCATCAAAAATCGCAAATAAACC
JMSF024K11+           GGATTGCAAGTACTGGGCAACATCATGGCCCATATGCCCATCAAAAATCGCAAATAAACC
                      ____________________________________________________________
consensus             GGATTGCAAGTACTGGGCAACATCATGGCCCATATGCCCATCAAAAATCGCAAATAAACC
 
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JMSF053E17+           CAAATCATGTTCATTTACTTTCTTAAATTTAGAAACCACATAATCTTCCATGGCATGATT
JMSF024K11+           CAAATCATGTTCATTTACTTTCTTAAATTTAGAAACCACATAATCTTCCATGGCATGATT
                      ____________________________________________________________
consensus             CAAATCATGTTCATTTACTTTCTTAAATTTAGAAACCACATAATCTTCCATGGCATGATT
 
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JMSF053E17+           TGATTTCCCTTTCAATAGGTGGAAGCCATTAGTGATCCTCTTCGATGTGCTTTTACCTTT
JMSF024K11+           TGATTTCCCTTTCAATAGGTGGAAGCCATTAGTGATCCTCTTCGATGTGCTTTTACCTTT
                      ____________________________________________________________
consensus             TGATTTCCCTTTCAATAGGTGGAAGCCATTAGTGATCCTCTTCGATGTGCTTTTACCTTT
 
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JMSF053E17+           CTCCGGATCTGGCGAGGCTGGCATAGAGGTGTAAAAGCATGCCTTCTCCTTCATCTTGTT
JMSF024K11+           CTCCGGATCTGGCGAGGCTGGCATAGAGGTGTAAAAGCATGCCTTCTCCTTCATCTTGTT
                      ____________________________________________________________
consensus             CTCCGGATCTGGCGAGGCTGGCATAGAGGTGTAAAAGCATGCCTTCTCCTTCATCTTGTT
 
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JMSF053E17+           AAGAATTTCCCTTCCTCCTGTCATGACTGTATCTTTCTTCCAAGTTCCAAGCACCAAACC
JMSF024K11+           AAGAATTTCCCTTCCTCCTGTCATGACTGTATCTTTCTTCCAAGTTCCAAGCACCAAACC
                      ____________________________________________________________
consensus             AAGAATTTCCCTTCCTCCTGTCATGACTGTATCTTTCTTCCAAGTTCCAAGCACCAAACC
 
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JMSF053E17+           AAACCTCAGATCAAAACGAAAACCAAGAACATAAAGAAGAAAAAGAGGGCTGTTTTTTCT
JMSF024K11+           AAACCTCAGATCAAAACGAAAACCAAGAACATAAAGAAGAAAAAGAGGGCTGTTTTTTCT
                      ____________________________________________________________
consensus             AAACCTCAGATCAAAACGAAAACCAAGAACATAAAGAAGAAAAAGAGGGCTGTTTTTTCT
 
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JMSF053E17+           TTATTTTGTTTCCTTGTAGATTTGCCTACTTCTGCGCGTATATGACGGTTGGTAATATAT
JMSF024K11+           TTATTTTGTTTCCTTGTAGATTTGCCTACTTCTGCGCGTATATGACGGTTGGTAATATAT
                      ____________________________________________________________
consensus             TTATTTTGTTTCCTTGTAGATTTGCCTACTTCTGCGCGTATATGACGGTTGGTAATATAT
 
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JMSF053E17+           ATAATATATAGGCTCGAATATAGATGTGGCAGGAATAGGAATAGGAATAGGAATAGGAAT
JMSF024K11+           ATAATATATAGGCTCGAATATAGATGTGGCAGGAATAGGAATAGGAATAGGAATAGGAAT
                      ____________________________________________________________
consensus             ATAATATATAGGCTCGAATATAGATGTGGCAGGAATAGGAATAGGAATAGGAATAGGAAT
 
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JMSF053E17+           AGGAA                                                       
JMSF024K11+           AGGAATAGGAAGAGGAATAGGAGGAGAATACAGATATAGTCAAGCTGTAAAATGGCAGTC
                      ____________________________________________________________
consensus             AGGAATAGGAAGAGGAATAGGAGGAGAATACAGATATAGTCAAGCTGTAAAATGGCAGTC