Contig 005098:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS057E03Sequence627005098 (2)ref|XP_009589114.1|374PREDICTED: dynamin-like protein ARC5 isoform X1 [Nicotiana tomentosiformis]
JMSF024G21Sequence645005098 (2)ref|XP_009589115.1|373PREDICTED: dynamin-like protein ARC5 isoform X2 [Nicotiana tomentosiformis]767022543ref|XP_009801220.1|426PREDICTED: dynamin-like protein ARC5 isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS057E03+                   TTGCTCCAATCATGCCAATCTTCAAGGCATAATATGATGAACTCTCTGTGCT
JMSF024G21+                                  CAATCTTCAAGGCATAATATGATGAACTCTCTGTGCT
                      ____________________________________________________________
consensus                     TTGCTCCAATCATGCCAATCTTCAAGGCATAATATGATGAACTCTCTGTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS057E03+           GCATTTTAGCTCTCACCAGAGATTCCACTGCACGAGCTTGCGCCTGGAATGCCCGATTCT
JMSF024G21+           GCATTTTAGCTCTCACCAGAGATTCCACTGCACGAGCTTGCGCCTGGAATGCCCGATTCT
                      ____________________________________________________________
consensus             GCATTTTAGCTCTCACCAGAGATTCCACTGCACGAGCTTGCGCCTGGAATGCCCGATTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS057E03+           TTCTACTTGGAGCAGGCGCAACAAGTCCTGGAGTGTCTATAATGGTAAGGTTGGGACAAT
JMSF024G21+           TTCTACTTGGAGCAGGCGCAACAAGTCCTGGAGTGTCTATAATGGTAAGGTTGGGACAAT
                      ____________________________________________________________
consensus             TTCTACTTGGAGCAGGCGCAACAAGTCCTGGAGTGTCTATAATGGTAAGGTTGGGACAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS057E03+           ACTTATATTCTATTCTGATAATTATTTCTTTCGCAGAAAACTGGCACGGCTCCTTCTCCA
JMSF024G21+           ACTTATATTCTATTCTGATAATTATTTCTTTCGCAGAAAACTGGCACGGCTCCTTCTCCA
                      ____________________________________________________________
consensus             ACTTATATTCTATTCTGATAATTATTTCTTTCGCAGAAAACTGGCACGGCTCCTTCTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS057E03+           ACCTCATGTTCTCAGCTTCTATAAATTCCTGAATTTCGTGGAGCGATCTTTCGTGGGAAA
JMSF024G21+           ACCTCATGTTCTCAGCTTCTATAAATTCCTGAATTTCGTGGAGCGATCTTTCGTGGGAAA
                      ____________________________________________________________
consensus             ACCTCATGTTCTCAGCTTCTATAAATTCCTGAATTTCGTGGAGCGATCTTTCGTGGGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS057E03+           CGGAGGGGTCGGAGTCGGACAAGAGATGGCAGAGAGGGGAGTCGCAGTCGGGGTTGTACT
JMSF024G21+           CGGAGGGGTCGGAGTCGGACAAGAGATGGCAGAGAGGGGAGTCGCAGTCGGGGTTGTACT
                      ____________________________________________________________
consensus             CGGAGGGGTCGGAGTCGGACAAGAGATGGCAGAGAGGGGAGTCGCAGTCGGGGTTGTACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS057E03+           TCATGTGGAGCGTGATGGGGCGGCGCGTCTTGGTGCCGCCGCCGACGTGGTTGAACTGGA
JMSF024G21+           TCATGTGGAGCGTGATGGGGCGGCGCGTCTTGGTGCCGCCGCCGACGTGGTTGAACTGGA
                      ____________________________________________________________
consensus             TCATGTGGAGCGTGATGGGGCGGCGCGTCTTGGTGCCGCCGCCGACGTGGTTGAACTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS057E03+           AGCCCATGAGGGCCTCGACGAGGGCGCTCTTGCCGTCGGTCTGGTGGCCCACCACCAGCA
JMSF024G21+           AGCCCATGAGGGCCTCGACGAGGGCGCTCTTGCCGTCGGTCTGGTGGCCCACCACCAGCA
                      ____________________________________________________________
consensus             AGCCCATGAGGGCCTCGACGAGGGCGCTCTTGCCGTCGGTCTGGTGGCCCACCACCAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS057E03+           CCGCCGGCGCGTCGAACGGCGTGTCGAACTCCTGCGCCAAGCCGTGCAGCTCATTGTAGG
JMSF024G21+           CCGCCGGCGCGTCGAACGGCGTGTCGAACTCCTGCGCCAAGCCGTGCAGCTCATTGTAGG
                      ____________________________________________________________
consensus             CCGCCGGCGCGTCGAACGGCGTGTCGAACTCCTGCGCCAAGCCGTGCAGCTCATTGTAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS057E03+           CCTCGTACAGCCGCCACTGCCCCTCCAATTCCTCGCTCTTCTTCGCGCCTTCTTCACTTG
JMSF024G21+           CCTCGTACAGCCGCCACTGCCCCTCCAATTCCTCGCTCTTCTTCGCGCCTTCTTCACTTG
                      ____________________________________________________________
consensus             CCTCGTACAGCCGCCACTGCCCCTCCAATTCCTCGCTCTTCTTCGCGCCTTCTTCACTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS057E03+           CCTCCATTTCTGCCCTTTGATTGCGCTAACAGCGA                         
JMSF024G21+           CCTCCATTTCTGCCCTTTGATTGCGCTAACAGCGATGGAAGAGTGTGAATTGTGTGATTC
                      ____________________________________________________________
consensus             CCTCCATTTCTGCCCTTTGATTGCGCTAACAGCGATGGAAGAGTGTGAATTGTGTGATTC