clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF022A16 | Sequence | 570 | 005097 (3) | ref|XP_008376131.1| | 5e-64 | PREDICTED: dynamin-related protein 1B-like [Malus domestica] | 332 | 012301 (3) | emb|CDP08676.1| | 5e-44 | unnamed protein product [Coffea canephora] |
JMSF024D21 | Sequence | 666 | 005097 (3) | gb|EPS62179.1| | 6e-89 | phragmoplastin, partial [Genlisea aurea] | 705 | 012301 (3) | ref|XP_006339704.1| | 5e-145 | PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum] |
JMSF051C09 | Sequence | 693 | 005097 (3) | gb|EPS62179.1| | 3e-96 | phragmoplastin, partial [Genlisea aurea] | 733 | 012301 (3) | ref|XP_006339704.1| | 1e-147 | PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF051C09+ CTCAATGTAAGAGCGAACCATGTTTTCAATGTC
____________________________________________________________
consensus CTCAATGTAAGAGCGAACCATGTTTTCAATGTC
. : . : . : . : . : . :
JMSF051C09+ ATAAACAATGCTTTCTGGCTGACCCTCAACAGCAACTTTAGTAAGTCCAGGAAGATCAAT
JMFF022A16+ CAACAGCAACTTTAGTAAGTCCAGGAAGATCAAT
JMSF024D21+ ACAATGCTTTCTGGCTGACCCTCAACAGCAACTTTAGTAAGTCCAGGAAGATCAAT
____________________________________________________________
consensus ATAAACAATGCTTTCTGGCTGACCCTCAACAGCAACTTTAGTAAGTCCAGGAAGATCAAT
. : . : . : . : . : . :
JMSF051C09+ CAATGTCAAGTTCACAACATTAGGAGAATATATACTGAGATAAATAGGAACACTTGAGAT
JMFF022A16+ CAATGTCAAGTTCACAACATTAGGAGAATATATACTGAGATAAATAGGA--ACTTGAGAT
JMSF024D21+ CAATGTCAAGTTCACAACATTAGGAGAATATATACTGAGATAAATAGGAACACTTGAGAT
____________________________________________________________
consensus CAATGTCAAGTTCACAACATTAGGAGAATATATACTGAGATAAATAGGAACACTTGAGAT
. : . : . : . : . : . :
JMSF051C09+ TGCTTTAGTACGGCCTGTCTCACGATCAGTTTCATCTGAAATTTCCTTCCTCACAGCAGC
JMFF022A16+ TGCTTTAGTACGGCCTGTCTCACGATCAGTTTCATCTGAAATTTCCTTCCTCACAGCAGC
JMSF024D21+ TGCTTTAGTACGGCCTGTCTCACGATCAGTTTCATCTGAAATTTCCTTCCTCACAGCAGC
____________________________________________________________
consensus TGCTTTAGTACGGCCTGTCTCACGATCAGTTTCATCTGAAATTTCCTTCCTCACAGCAGC
. : . : . : . : . : . :
JMSF051C09+ AAAATCAGTAAACCTTTTCCTTGGAATGTGCCCAAATTCTGCATATTCTCGATTTTCATC
JMFF022A16+ AAAATCAGTAAACCTTTTCCTTGGAATGTGCCCAAATTCTGCATATTCTCGATTTTCATC
JMSF024D21+ AAAATCAGTAAACCTTTTCCTTGGAATGTGCCCAAATTCTGCATATTCTCGATTTTCATC
____________________________________________________________
consensus AAAATCAGTAAACCTTTTCCTTGGAATGTGCCCAAATTCTGCATATTCTCGATTTTCATC
. : . : . : . : . : . :
JMSF051C09+ TATGCGATGAAGCTGTAGGACAAGTGGACGACGGGTCACAATACCTGATCCACGGGGTAA
JMFF022A16+ TATGCGATGAAGCTGTAGGACAAGTGGACGACGGGTCACAATACCTGATCCACGGGGTAA
JMSF024D21+ TATGCGATGAAGCTGTAGGACAAGTGGACGACGGGTCACAATACCTGATCCACGGGGTAA
____________________________________________________________
consensus TATGCGATGAAGCTGTAGGACAAGTGGACGACGGGTCACAATACCTGATCCACGGGGTAA
. : . : . : . : . : . :
JMSF051C09+ AAAGTCCTTGCCAACAATGCTCTCTAGCACAGAAGACTTTCCTGAGCTCTGGCCACCGAC
JMFF022A16+ AAAGTCCTTGCCAACAATGCTCTCTAGCACAGAAGACTTTCCTGAGCTCTGGCCACCGAC
JMSF024D21+ AAAGTCCTTGCCAACAATGCTCTCTAGCACAGAAGACTTTCCTGAGCTCTGGCCACCGAC
____________________________________________________________
consensus AAAGTCCTTGCCAACAATGCTCTCTAGCACAGAAGACTTTCCTGAGCTCTGGCCACCGAC
. : . : . : . : . : . :
JMSF051C09+ GACGGCGATGGAAGGTAACGCATCCCACAGAGTAGGCAAAGCACTGTCCTCACCGTGATC
JMFF022A16+ GACGGCGATGGAAGGTAACGCATCCCACAGAGTAGGCAAAGCACTGTCCTCACCGTGATC
JMSF024D21+ GACGGCGATGGAAGGTAACGCATCCCACAGAGTAGGCAAAGCACTGTCCTCACCGTGATC
____________________________________________________________
consensus GACGGCGATGGAAGGTAACGCATCCCACAGAGTAGGCAAAGCACTGTCCTCACCGTGATC
. : . : . : . : . : . :
JMSF051C09+ GCCTAGCGCTGTGCAAGCTCTCTGCAATCTGTT
JMFF022A16+ GCCTAGCGCTGTGCAAGCTCTCTGCAATCTGTT
JMSF024D21+ GCCTAGCGCTGTGCAAGCTCTCTGCAATCTGTTTACCAATGAGATGAGGCTCTCCATTGT
____________________________________________________________
consensus GCCTAGCGCTGTGCAAGCTCTCTGCAATCTGTTTACCAATGAGATGAGGCTCTCCATTGT
. : . : . : . : . : . :
JMSF024D21+ ATCTGTCCAAGTAACAGATCTGCGTCGATTTGAATCCGGAACCGCTAAAAACAAAAAACT
____________________________________________________________
consensus ATCTGTCCAAGTAACAGATCTGCGTCGATTTGAATCCGGAACCGCTAAAAACAAAAAACT
. : . : . : . : . : . :
JMSF024D21+ ACTCGGCGAGTTGACAGATCAAATGGAGGGATTTTGAATTTCTGTACTGCAGACCGACAA
____________________________________________________________
consensus ACTCGGCGAGTTGACAGATCAAATGGAGGGATTTTGAATTTCTGTACTGCAGACCGACAA
. : . : . : . : . : . :
JMSF024D21+ TCAAAATGAATCGGACGGAAATTTGAAGCAGTGGCAAAATTTTCTATAAGTTGGTTTCCC
____________________________________________________________
consensus TCAAAATGAATCGGACGGAAATTTGAAGCAGTGGCAAAATTTTCTATAAGTTGGTTTCCC