Contig 005097:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022A16Sequence570005097 (3)ref|XP_008376131.1|5e-64PREDICTED: dynamin-related protein 1B-like [Malus domestica]332012301 (3)emb|CDP08676.1|5e-44unnamed protein product [Coffea canephora]
JMSF024D21Sequence666005097 (3)gb|EPS62179.1|6e-89phragmoplastin, partial [Genlisea aurea]705012301 (3)ref|XP_006339704.1|5e-145PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]
JMSF051C09Sequence693005097 (3)gb|EPS62179.1|3e-96phragmoplastin, partial [Genlisea aurea]733012301 (3)ref|XP_006339704.1|1e-147PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF051C09+ CTCAATGTAAGAGCGAACCATGTTTTCAATGTC
                      ____________________________________________________________
consensus CTCAATGTAAGAGCGAACCATGTTTTCAATGTC
 
. : . : . : . : . : . :
JMSF051C09+ ATAAACAATGCTTTCTGGCTGACCCTCAACAGCAACTTTAGTAAGTCCAGGAAGATCAAT
JMFF022A16+ CAACAGCAACTTTAGTAAGTCCAGGAAGATCAAT
JMSF024D21+ ACAATGCTTTCTGGCTGACCCTCAACAGCAACTTTAGTAAGTCCAGGAAGATCAAT
                      ____________________________________________________________
consensus ATAAACAATGCTTTCTGGCTGACCCTCAACAGCAACTTTAGTAAGTCCAGGAAGATCAAT
 
. : . : . : . : . : . :
JMSF051C09+ CAATGTCAAGTTCACAACATTAGGAGAATATATACTGAGATAAATAGGAACACTTGAGAT
JMFF022A16+ CAATGTCAAGTTCACAACATTAGGAGAATATATACTGAGATAAATAGGA--ACTTGAGAT
JMSF024D21+ CAATGTCAAGTTCACAACATTAGGAGAATATATACTGAGATAAATAGGAACACTTGAGAT
                      ____________________________________________________________
consensus CAATGTCAAGTTCACAACATTAGGAGAATATATACTGAGATAAATAGGAACACTTGAGAT
 
. : . : . : . : . : . :
JMSF051C09+ TGCTTTAGTACGGCCTGTCTCACGATCAGTTTCATCTGAAATTTCCTTCCTCACAGCAGC
JMFF022A16+ TGCTTTAGTACGGCCTGTCTCACGATCAGTTTCATCTGAAATTTCCTTCCTCACAGCAGC
JMSF024D21+ TGCTTTAGTACGGCCTGTCTCACGATCAGTTTCATCTGAAATTTCCTTCCTCACAGCAGC
                      ____________________________________________________________
consensus TGCTTTAGTACGGCCTGTCTCACGATCAGTTTCATCTGAAATTTCCTTCCTCACAGCAGC
 
. : . : . : . : . : . :
JMSF051C09+ AAAATCAGTAAACCTTTTCCTTGGAATGTGCCCAAATTCTGCATATTCTCGATTTTCATC
JMFF022A16+ AAAATCAGTAAACCTTTTCCTTGGAATGTGCCCAAATTCTGCATATTCTCGATTTTCATC
JMSF024D21+ AAAATCAGTAAACCTTTTCCTTGGAATGTGCCCAAATTCTGCATATTCTCGATTTTCATC
                      ____________________________________________________________
consensus AAAATCAGTAAACCTTTTCCTTGGAATGTGCCCAAATTCTGCATATTCTCGATTTTCATC
 
. : . : . : . : . : . :
JMSF051C09+ TATGCGATGAAGCTGTAGGACAAGTGGACGACGGGTCACAATACCTGATCCACGGGGTAA
JMFF022A16+ TATGCGATGAAGCTGTAGGACAAGTGGACGACGGGTCACAATACCTGATCCACGGGGTAA
JMSF024D21+ TATGCGATGAAGCTGTAGGACAAGTGGACGACGGGTCACAATACCTGATCCACGGGGTAA
                      ____________________________________________________________
consensus TATGCGATGAAGCTGTAGGACAAGTGGACGACGGGTCACAATACCTGATCCACGGGGTAA
 
. : . : . : . : . : . :
JMSF051C09+ AAAGTCCTTGCCAACAATGCTCTCTAGCACAGAAGACTTTCCTGAGCTCTGGCCACCGAC
JMFF022A16+ AAAGTCCTTGCCAACAATGCTCTCTAGCACAGAAGACTTTCCTGAGCTCTGGCCACCGAC
JMSF024D21+ AAAGTCCTTGCCAACAATGCTCTCTAGCACAGAAGACTTTCCTGAGCTCTGGCCACCGAC
                      ____________________________________________________________
consensus AAAGTCCTTGCCAACAATGCTCTCTAGCACAGAAGACTTTCCTGAGCTCTGGCCACCGAC
 
. : . : . : . : . : . :
JMSF051C09+ GACGGCGATGGAAGGTAACGCATCCCACAGAGTAGGCAAAGCACTGTCCTCACCGTGATC
JMFF022A16+ GACGGCGATGGAAGGTAACGCATCCCACAGAGTAGGCAAAGCACTGTCCTCACCGTGATC
JMSF024D21+ GACGGCGATGGAAGGTAACGCATCCCACAGAGTAGGCAAAGCACTGTCCTCACCGTGATC
                      ____________________________________________________________
consensus GACGGCGATGGAAGGTAACGCATCCCACAGAGTAGGCAAAGCACTGTCCTCACCGTGATC
 
. : . : . : . : . : . :
JMSF051C09+ GCCTAGCGCTGTGCAAGCTCTCTGCAATCTGTT
JMFF022A16+ GCCTAGCGCTGTGCAAGCTCTCTGCAATCTGTT
JMSF024D21+ GCCTAGCGCTGTGCAAGCTCTCTGCAATCTGTTTACCAATGAGATGAGGCTCTCCATTGT
                      ____________________________________________________________
consensus GCCTAGCGCTGTGCAAGCTCTCTGCAATCTGTTTACCAATGAGATGAGGCTCTCCATTGT
 
. : . : . : . : . : . :
JMSF024D21+ ATCTGTCCAAGTAACAGATCTGCGTCGATTTGAATCCGGAACCGCTAAAAACAAAAAACT
                      ____________________________________________________________
consensus ATCTGTCCAAGTAACAGATCTGCGTCGATTTGAATCCGGAACCGCTAAAAACAAAAAACT
 
. : . : . : . : . : . :
JMSF024D21+ ACTCGGCGAGTTGACAGATCAAATGGAGGGATTTTGAATTTCTGTACTGCAGACCGACAA
                      ____________________________________________________________
consensus ACTCGGCGAGTTGACAGATCAAATGGAGGGATTTTGAATTTCTGTACTGCAGACCGACAA
 
. : . : . : . : . : . :
JMSF024D21+ TCAAAATGAATCGGACGGAAATTTGAAGCAGTGGCAAAATTTTCTATAAGTTGGTTTCCC
                      ____________________________________________________________
consensus TCAAAATGAATCGGACGGAAATTTGAAGCAGTGGCAAAATTTTCTATAAGTTGGTTTCCC