| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016H07 | Sequence | 251 | 005096 (6) | gb|ACR35335.1| | 1e-04 | unknown [Zea mays] gb|AFW74465.1| hypothetical protein ZEAMMB73_516914 [Zea mays | 221 | 005096 (6) | gb|ACR35335.1| | 1e-04 | unknown [Zea mays] gb|AFW74465.1| hypothetical protein ZEAMMB73_516914 [Zea mays |
| JMSF024C22 | Sequence | 362 | 005096 (6) | gb|ACR35335.1| | 3e-04 | unknown [Zea mays] gb|AFW74465.1| hypothetical protein ZEAMMB73_516914 [Zea mays | |||||
| JMSF040K01 | Sequence | 276 | 005096 (6) | gb|ACR35335.1| | 1e-04 | unknown [Zea mays] gb|AFW74465.1| hypothetical protein ZEAMMB73_516914 [Zea mays | 220 | 005096 (6) | gb|ACR35335.1| | 7e-05 | unknown [Zea mays] gb|AFW74465.1| hypothetical protein ZEAMMB73_516914 [Zea mays |
| JMSF041K01 | Sequence | 197 | 005096 (6) | ||||||||
This contig is upended
. : . : . : . : . : . :
JMSF040K01- GTGCGTCTCTGCTTCTGTCACCATGAGAGCCAAGTG
rJMSF041K01+ GTGCGTCTCTGCTTCTGTCNCCATGAGAGCCAAGTG
rJMFF016H07+ CATGAGAGCCAAGTG
rJMSF040K01+ GTGCGTCTCTGCTTCTGTCACCATGAGAGCCAAGTG
JMFF016H07- CATGAGAGCCAAGTG
JMSF024C22- CATGAGAGCCAAGTG
____________________________________________________________
consensus GTGCGTCTCTGCTTCTGTCACCATGAGAGCCAAGTG
. : . : . : . : . : . :
JMSF040K01- GAAAAAGAAGAGAATGAGGAGGTTGAAGAGGAAACGCCGAAAGATGAGACAAAGATCCAA
rJMSF041K01+ GAAAAAGAAGAGAATGAGGAGNTTGAAGAGGAAACGCCGAAAGATGNGACAAAGATCCAA
rJMFF016H07+ GAAAAAGAAGAGAATGAGGAGGTTGAAGAGGAAACGCCGAAAGATGAGACAAAGATCCAA
rJMSF040K01+ GAAAAAGAAGAGAATGAGGAGGTTGAAGAGGAAACGCCGAAAGATGAGACAAAGATCCAA
JMFF016H07- GAAAAAGAAGAGAATGAGGAGGTTGAAGAGGAAACGCCGAAAGATGAGACAAAGATCCAA
JMSF024C22- GAAAAAGAAGAGAATGAGGAGGTTGAAGAGGAAACGCCGAAAGATGAGACAAAGATCCAA
____________________________________________________________
consensus GAAAAAGAAGAGAATGAGGAGGTTGAAGAGGAAACGCCGAAAGATGAGACAAAGATCCAA
. : . : . : . : . : . :
JMSF040K01- GTAGAA
rJMSF041K01+ GTAGAATGGTTCGATAAGTTCCAAAAACAAAANTGGAGTAATTTGTTTNCGTTTGTTTAC
rJMFF016H07+ GTAGAATGGTTCGATAAGTTCCAAAAACAAAATTGGAGTAATTTGTTTTCGTTTGTTTA-
rJMSF040K01+ GTAGAATGGTTCGATAAGTTCCAAAAACAAAATTGGAGTAATTTGTTTTCGTTTGTTTA-
JMFF016H07- GTAGAATGGTTCGATAAGTTCCAAAAACAAAATTGGAGTAATTTGTTTTCGTTTGTTTA-
JMSF024C22- GTAGAATGGTTCGATAAGTTCCAAAAACAAAATTGGAGTAATTTGTTTTCGTTTGTTTA-
____________________________________________________________
consensus GTAGAATGGTTCGATAAGTTCCAAAAACAAAATTGGAGTAATTTGTTTTCGTTTGTTTA-
. : . : . : . : . : . :
rJMSF041K01+ GAGTCTTTANAGTATGAACTCAGTTCGTAATTCTCTCCTGT
rJMFF016H07+ GAGTCTTTAGAGTATGAACTCAGTTCGTAAT
rJMSF040K01+ GAGTCTTTAGAGTATGAACTCAGTTCGTAATTCTCTCCTGTTTTGGTGATACATTTTAAA
JMFF016H07- GAGTCTTTAGAGTATGAACTCAGTTCGTAATTCTCTCCTGTTTTGGTGATACATTTTAAA
JMSF024C22- GAGTCTTTAGAGTATGAACTCAGTTCGTAATTCTCTCCTGTTTTGGTGATACATTTTAAA
____________________________________________________________
consensus GAGTCTTTAGAGTATGAACTCAGTTCGTAATTCTCTCCTGTTTTGGTGATACATTTTAAA
. : . : . : . : . : . :
JMSF024C22- GTTTCAGTTTTATGCACTTGGTAGTGTATTTATTTAGCTTAATTATGTTTCTGAAGGTTT
____________________________________________________________
consensus GTTTCAGTTTTATGCACTTGGTAGTGTATTTATTTAGCTTAATTATGTTTCTGAAGGTTT
. : . : . : . : . : . :
JMSF024C22- TTGGCACGTATATTACATTTTTATGCATTTGCTATTGATTTTAAAAAAAGAAAAAAAAAA
____________________________________________________________
consensus TTGGCACGTATATTACATTTTTATGCATTTGCTATTGATTTTAAAAAAAGAAAAAAAAAA