Contig 005092:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023L16Sequence596005092 (2)ref|XP_006353223.1|1e-10PREDICTED: uncharacterized protein LOC102593154 isoform X2 [Solanum tuberosum]716001450 (2)ref|XP_009802514.1|2e-30PREDICTED: uncharacterized protein LOC104248031 isoform X2 [Nicotiana sylvestri
JMSF040P22Sequence689005092 (2)ref|XP_006353223.1|2e-10PREDICTED: uncharacterized protein LOC102593154 isoform X2 [Solanum tuberosum]792001450 (2)ref|XP_009802514.1|2e-45PREDICTED: uncharacterized protein LOC104248031 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P22+                                          GAATTTACCAAATCTTATAAGTTCATATT
                      ____________________________________________________________
consensus                                            GAATTTACCAAATCTTATAAGTTCATATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P22+           TACATAAATGCTGCAAGTTTTACAAGTTTGACTCCCAACGGGAGCGACCAATTGGCCTTC
                      ____________________________________________________________
consensus             TACATAAATGCTGCAAGTTTTACAAGTTTGACTCCCAACGGGAGCGACCAATTGGCCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P22+           TTGGTTTGAATCGATCAACTATGCACCCTAAGCTGGTTTACCTCATTGTGGTCCGTGTTT
JMSF023L16+               TTTGAATCGATCAACTATGCACCCTAAGCTGGTTTACCTCATTGTGGTCCGTGTTT
                      ____________________________________________________________
consensus             TTGGTTTGAATCGATCAACTATGCACCCTAAGCTGGTTTACCTCATTGTGGTCCGTGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P22+           ACCCGTGCACACCATTGGACAGTGGCAACAAGTTTTCCTCGTCACCCAAAAAAACACTAA
JMSF023L16+           ACCCGTGCACACCATTGGACAGTGGCAACAAGTTTTCCTCGTCACCCAAAAAAACACTAA
                      ____________________________________________________________
consensus             ACCCGTGCACACCATTGGACAGTGGCAACAAGTTTTCCTCGTCACCCAAAAAAACACTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P22+           AAAATCTATCAATCACAAAGTTCAAAAAATAAGTGCAAAGCAATAAAGAGAACTTTTTCA
JMSF023L16+           AAAATCTATCAATCACAAAGTTCAAAAAATAAGTGCAAAGCAATAAAGAGAACTTTTTCA
                      ____________________________________________________________
consensus             AAAATCTATCAATCACAAAGTTCAAAAAATAAGTGCAAAGCAATAAAGAGAACTTTTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P22+           TCAGCAATTAAATTAAACAAACCATCTTGAGTCTCTGGCTTCTGAAATGAACCTCCCCTA
JMSF023L16+           TCAGCAATTAAATTAAACAAACCATCTTGAGTCTCTGGCTTCTGAAATGAACCTCCCCTA
                      ____________________________________________________________
consensus             TCAGCAATTAAATTAAACAAACCATCTTGAGTCTCTGGCTTCTGAAATGAACCTCCCCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P22+           GACACATTTTGATGCTTGCACAAAGAAGGAAGGCGAGAACTGTCAAATAAACAAAAACTA
JMSF023L16+           GACACATTTTGATGCTTGCACAAAGAAGGAAGGCGAGAACTGTCAAATAAACAAAAACTA
                      ____________________________________________________________
consensus             GACACATTTTGATGCTTGCACAAAGAAGGAAGGCGAGAACTGTCAAATAAACAAAAACTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P22+           GCAGTTTCATCGTCTCCAATTACTCTGTAATAAATAATGAACACATAAGAAATCCAGAAC
JMSF023L16+           GCAGTTTCATCGTCTCCAATTACTCTGTAATAAATAATGAACACATAAGAAATCCAGAAC
                      ____________________________________________________________
consensus             GCAGTTTCATCGTCTCCAATTACTCTGTAATAAATAATGAACACATAAGAAATCCAGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P22+           CTAATCAACATCTCAAACCTTTGGAAAGTGCTCACGAATGAGATGGCACTTCGTATCAAT
JMSF023L16+           CTAATCAACATCTCAAACCTTTGGAAAGTGCTCACGAATGAGATGGCACTTCGTATCAAT
                      ____________________________________________________________
consensus             CTAATCAACATCTCAAACCTTTGGAAAGTGCTCACGAATGAGATGGCACTTCGTATCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P22+           GTCAAGCTCGCAGCATTCTTGTACCACAAAGAGGGCGAGGTTAGCAAGAAAGCGAAGGGA
JMSF023L16+           GTCAAGCTCGCAGCATTCTTGTACCACAAAGAGGGCGAGGTTAGCAAGAAAGCGAAGGGA
                      ____________________________________________________________
consensus             GTCAAGCTCGCAGCATTCTTGTACCACAAAGAGGGCGAGGTTAGCAAGAAAGCGAAGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P22+           GGTGGAATCATCGTCGCTGGAAGAACTGATGATGATTCCTAACGACTGCATCATCTCCAT
JMSF023L16+           GGTGGAATCATCGTCGCTGGAAGAACTGATGATGATTCCTAACGACTGCATCATCTCCAT
                      ____________________________________________________________
consensus             GGTGGAATCATCGTCGCTGGAAGAACTGATGATGATTCCTAACGACTGCATCATCTCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040P22+           CATGCTTTGTAGCTTCTGCAACTTCTTTAGCCCTTCCATAACTTCCATTGTTTCTTCACC
JMSF023L16+           CATGCTTTGTAGCTTCTGCAACTTCTTTAGCCCTTCCATAACTTCCATTGTTTCTTCACC
                      ____________________________________________________________
consensus             CATGCTTTGTAGCTTCTGCAACTTCTTTAGCCCTTCCATAACTTCCATTGTTTCTTCACC