Contig 005090:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN042B19+                   TTTTTTTGCAGAAGTGGCCGGCGGTTTAAGCTTGTCACCGCCGGAATTTTTT
                      ____________________________________________________________
consensus                     TTTTTTTGCAGAAGTGGCCGGCGGTTTAAGCTTGTCACCGCCGGAATTTTTT
 
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JMFN042B19+           TTACAGAAGTGGCCGGAGTTCTGCCTCTAGAGCTACACAAGAGACACTTGAGAGTTTTTG
                      ____________________________________________________________
consensus             TTACAGAAGTGGCCGGAGTTCTGCCTCTAGAGCTACACAAGAGACACTTGAGAGTTTTTG
 
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JMFN042B19+           TGTTTTTTTTTACTGTCGTAGGAGATTCGTTGCTACGCTCGCCAGAGTTGGAGTTGATGA
                      ____________________________________________________________
consensus             TGTTTTTTTTTACTGTCGTAGGAGATTCGTTGCTACGCTCGCCAGAGTTGGAGTTGATGA
 
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JMFN042B19+           AGACCCTCCGTCAACGTTACCAGAGACAGATTTAAGCTTGTCACCGGAAACCXXXXXXXX
                      ____________________________________________________________
consensus             AGACCCTCCGTCAACGTTACCAGAGACAGATTTAAGCTTGTCACCGGAAACCNNNNNNNN
 
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JMFN042B19+           XXXXXXXXXXXXCACGCCACTGGACTCTGACGCTGCGAGACCAGGAATAATGGGTGTTGA
rJMSF023J02-                                                                   TGA
JMSF023J02+                       CACGCCACTGGACTNTGACGCTGCGAGACCAGGAATAATGGGTGTTGA
                      ____________________________________________________________
consensus             NNNNNNNNNNNNCACGCCACTGGACTCTGACGCTGCGAGACCAGGAATAATGGGTGTTGA
 
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JMFN042B19+           TCTCTGCTACTGCCGGATGCCGATCGTCGCAGCTGCCGGAGTTACCGAAGGATTGCATCT
rJMSF023J02-          TCTCTGCTACTGCCGGATGCCGATCGTCGCAGCTGCCGGAGTTACCGAAGGATTGCATCT
JMSF023J02+           TCTNTGCTACTGCCGGATGCCGATCGTCGCAGCTGCCGGAGTTACCGAAGGATTGCATNT
                      ____________________________________________________________
consensus             TCTCTGCTACTGCCGGATGCCGATCGTCGCAGCTGCCGGAGTTACCGAAGGATTGCATCT
 
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JMFN042B19+           CAGAAGCTTTGTTTCCCCATCGTTTCTCGTCTTTCGCCCGGATTTTCCGGCGGAAGTCAC
rJMSF023J02-          CAGAAGCTTTGTTTCCACATCGTTTCTCGTCTTTCGCCCGGATTTTCCGGCGGAAGTCAC
JMSF023J02+           CAGAAGCTTTGTTTCCACATCGTTTCTCGTCTTTCGCCCGGATTTTCCGGCGGAAGTCAC
                      ____________________________________________________________
consensus             CAGAAGCTTTGTTTCCACATCGTTTCTCGTCTTTCGCCCGGATTTTCCGGCGGAAGTCAC
 
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JMFN042B19+           TGCAGATCGCCACATACCGTCAGAGACCGCCTATACTGGAGGTTATCGCCAGAGCCCAGA
rJMSF023J02-          TGCAGATCGCCACATACCGTCAGAGACCGCCTATACTGGAGGTTATCGCCAGAGCCCAGA
JMSF023J02+           TGCAGATCGCCACATACCGTCAGAGACCGCCTATACTGGAGGTTATCGCCAGAGCCCAGA
                      ____________________________________________________________
consensus             TGCAGATCGCCACATACCGTCAGAGACCGCCTATACTGGAGGTTATCGCCAGAGCCCAGA
 
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JMFN042B19+           GGTTGGTGGAACCTATCCTCTTTGTCAATGGGACCACCGGAGTTTCCCCCTGTTGGAGAT
rJMSF023J02-          GGTTGGTGGAACCTATCCTCTTTGTCAATGGGACCACCGGAGTTTCCCCCTGTTGGAGAT
JMSF023J02+           GGTTGGTGGAACCTATCCTNTTTGTCAATGGGACCACCGGAGTTTCCCCCTGTTGGAGAT
                      ____________________________________________________________
consensus             GGTTGGTGGAACCTATCCTCTTTGTCAATGGGACCACCGGAGTTTCCCCCTGTTGGAGAT
 
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JMFN042B19+           CGATGCTCAACCCAAGAAGTATGCTAACCTTCGACTCTTTGCTGAGCTGCTACGTCGACT
rJMSF023J02-          CGATGCTCAACCCAAGAAGTATGCTAACCTTCGACTCTTTGCTGAGCTGCTACGTCGACT
JMSF023J02+           CGATGCTCAACCCAAGAAGTATGCTAACCTTCGACTCTTTGCTGAGCTGNTACGTCGACT
                      ____________________________________________________________
consensus             CGATGCTCAACCCAAGAAGTATGCTAACCTTCGACTCTTTGCTGAGCTGCTACGTCGACT
 
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JMFN042B19+           GAGAAAACACACAGAG                                            
rJMSF023J02-          GAGAAAACACACAGAGGAAAAAAAAAATTTGTTGATATGAAGTGCTGGTGGTGAATGCCC
JMSF023J02+           GAGAAAACACACAGAGGAAAAAAAAAATTTGTTGATATGAAGTGCTGGTGGTGAATGCCC
                      ____________________________________________________________
consensus             GAGAAAACACACAGAGGAAAAAAAAAATTTGTTGATATGAAGTGCTGGTGGTGAATGCCC