Contig 005089:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF022K22-                                                                CTACGC
                      ____________________________________________________________
consensus                                                                   CTACGC
 
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rJMSF022K22-          CAAAACCAAAATTGTGCTCTACTTATTATCATAAAAGAGAAGAAGAAATTGTTGAACTAT
rJMSF023G12-                CAAAATTGTGCTCTACTTATTATCATAAAAGAGAAGAAGAAATTGTTGAACTAT
                      ____________________________________________________________
consensus             CAAAACCAAAATTGTGCTCTACTTATTATCATAAAAGAGAAGAAGAAATTGTTGAACTAT
 
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rJMSF022K22-          AAGGCTGAGACAACATGCGAACAGCTAAAATGATCAGTTGGACTCTGGTAGTCTTTTGAA
rJMSF023G12-          AAGGCTGAGACAACATGCGAACAGCTAAAATGATCAGTTGGACTCTGGTAGTCTTTTGAA
                      ____________________________________________________________
consensus             AAGGCTGAGACAACATGCGAACAGCTAAAATGATCAGTTGGACTCTGGTAGTCTTTTGAA
 
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rJMSF022K22-          AAAAAAAATAAAACCACCTATAGGCCAAAACCAATCTTCTAAACACTATACGAGGAGGAA
rJMSF023G12-          AAAAAAAATAAAACCACCTATAGGCCAAAACCAATCTTCTAAACACTATACGAGGAGGAA
                      ____________________________________________________________
consensus             AAAAAAAATAAAACCACCTATAGGCCAAAACCAATCTTCTAAACACTATACGAGGAGGAA
 
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rJMSF022K22-          AGGCATGGGGATGCATGCAGCAAATCACACACCTTATATCAACATCCGACATGAAAAACA
rJMSF023G12-          AGGCATGGGGATGCATGCAGCAAATCACACACCTTATATCAACATCCGACATGAAAAACA
                      ____________________________________________________________
consensus             AGGCATGGGGATGCATGCAGCAAATCACACACCTTATATCAACATCCGACATGAAAAACA
 
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rJMSF022K22-          AAACAAGTCACAACAAGACACGACAGTCGATATCTATAANGTTTTAAGACATACATCGCC
rJMSF023G12-          AAACAAGTCACAACAAGACACGACAGTCGATATCTATAANGTTTTAAGACATACATCGCC
                      ____________________________________________________________
consensus             AAACAAGTCACAACAAGACACGACAGTCGATATCTATAANGTTTTAAGACATACATCGCC
 
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rJMSF022K22-          NGGTGCATCCTCAGCCACCCCCTTCTCCAGAAACACGTGATGTTCTAATCATCTTTAATA
rJMSF023G12-          NGGTGCATCCTCAGCCACCCCCTTCTCCAGAAACACGTGATGTTCTAATCATCTTTAATA
                      ____________________________________________________________
consensus             NGGTGCATCCTCAGCCACCCCCTTCTCCAGAAACACGTGATGTTCTAATCATCTTTAATA
 
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rJMSF022K22-          CTTCACTCTGCATCCCCAGCTCCTCCCGCTTTTTTTGCAGCATCCCCTGTTTGGGTATCT
rJMSF023G12-          CTTCACTCTGCATCCCCAGCTCCTCCCGCTTTTTTTGCAGCATCCCCTGTTTGGGTATCT
                      ____________________________________________________________
consensus             CTTCACTCTGCATCCCCAGCTCCTCCCGCTTTTTTTGCAGCATCCCCTGTTTGGGTATCT
 
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rJMSF022K22-          TCAGCATCCTCCTGGATGTCAGAGGTCCATAAGGTAAGATTGTCCCTCAGAAGTTGCATT
rJMSF023G12-          TCAGCATCCTCCTGGATGTCANAGGTCCATAAGGTAAGATTGTCCCTCANAAGTTGCATT
                      ____________________________________________________________
consensus             TCAGCATCCTCCTGGATGTCAGAGGTCCATAAGGTAAGATTGTCCCTCAGAAGTTGCATT
 
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rJMSF022K22-          ATCAAGGTGCTATCCTTATATGACTCCTCATTGAGGGTATCCAGCTCAGAAATTGCTTCA
rJMSF023G12-          ATCAAGGNGCTATCCTTATATGACTCCTCATTGAGGGTATCCAGCTCAGAAATTGCTTCA
JMSF022K22+                                                                   TTCA
                      ____________________________________________________________
consensus             ATCAAGGTGCTATCCTTATATGACTCCTCATTGAGGGTATCCAGCTCAGAAATTGCTTCA
 
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rJMSF022K22-          TCAAAAGCCTGCTTTGCAAGGTGGCAAGCCCTTTCAGGGGAGTTCATGATCTCATAGTAG
rJMSF023G12-          TCAAAAGCCTGCTTTGCAAGGTGGCAAGCCCTTTCAGGGGAGTTCATGATCTCATAGTAG
JMSF022K22+           TCAAAAGCCTGCTTTGCAAGGTGGCAAGCCCTTTCAGGGGAGTTCATGATNTCATAGTAG
JMSF023G12+                           CAAGGTGGCAAGCCCTTTCAGGGGAGTTCATGATCTCATAGTAG
                      ____________________________________________________________
consensus             TCAAAAGCCTGCTTTGCAAGGTGGCAAGCCCTTTCAGGGGAGTTCATGATCTCATAGTAG
 
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rJMSF022K22-          AAAACAGAGAAATTCAAAGTCAAACCCAGGCGAATGGGATGTGTAGGTGGTAAATCAGCC
rJMSF023G12-          AAAACAGAGAAATTCAAAGTCAAACCCAGGCGAATGGGATGTGTAGGTGGTAAATCAGCC
JMSF022K22+           AAAACAGAGAAATTCAAAGTCAAACCCAGGCGAATGGGATGTGTAGGTGGTAAATCAGCC
JMSF023G12+           AAAACAGAGAAATTCAAAGTCAAACCCAGGCGAATGGGATGTGTAGGTGGTAAATCAGCC
                      ____________________________________________________________
consensus             AAAACAGAGAAATTCAAAGTCAAACCCAGGCGAATGGGATGTGTAGGTGGTAAATCAGCC
 
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rJMSF022K22-          TCTGCTGTAGTGG                                               
rJMSF023G12-          TCTGCTGTAGTGGTAGC                                           
JMSF022K22+           TCTGCTGTAGTGGTAGCAGCCTGATACGCTTTTAGTGAAAGATCAGCAACCTCTCTCTTG
JMSF023G12+           TCTGCTGTAGTGGTAGCAGCCTGATACGCTTTTAGTGAAAGATCAGCAACCTCTCTCTTG
                      ____________________________________________________________
consensus             TCTGCTGTAGTGGTAGCAGCCTGATACGCTTTTAGTGAAAGATCAGCAACCTCTCTCTTG
 
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JMSF022K22+           TCATCACCAGTTTTGAATTCTGCAAGATACCGGTAATAATCCCCTTTCATCTTATAATAG
JMSF023G12+           TCATCACCAGTTTTGAATTCTGCAAGATACCGGTAATAATCCCCTTTCATCTTATAATAG
                      ____________________________________________________________
consensus             TCATCACCAGTTTTGAATTCTGCAAGATACCGGTAATAATCCCCTTTCATCTTATAATAG
 
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JMSF022K22+           AAGACATTTGATTCACCAGTAGTACATGCTGGGATAAGATGCTCATCTATCAAAACCATG
JMSF023G12+           AAGACATTTGATTCACCAGTAGTACATGCTGGGATAAGATGCTCATCTATCAAAACCATG
                      ____________________________________________________________
consensus             AAGACATTTGATTCACCAGTAGTACATGCTGGGATAAGATGCTCATCTATCAAAACCATG
 
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JMSF022K22+           ATATCATTGCAGATGTTGGTAAGCTCAGTCTCCACTTTTTGCCTGTACTCCTTGATCCTC
JMSF023G12+           ATATCATTGCAGATGTTGGTAAGCTCAGTCTCCACTTTTTGCCTGTACTCCTTGATCCTC
                      ____________________________________________________________
consensus             ATATCATTGCAGATGTTGGTAAGCTCAGTCTCCACTTTTTGCCTGTACTCCTTGATCCTC
 
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JMSF022K22+           TTAACATTCTGCCCATTCCCTCTGGACTCTTCCTTTTGCTCAATGGATGACAAGATCCTC
JMSF023G12+           TTAACATTCTGCCCATTCCCTCTGGACTCTTCCTTTTGCTCAATGGATGACAAGATCCTC
                      ____________________________________________________________
consensus             TTAACATTCTGCCCATTCCCTCTGGACTCTTCCTTTTGCTCAATGGATGACAAGATCCTC
 
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JMSF022K22+           CACGACGCTCTCCGAGATCCCACCACATTCTTGTACCCAACAGAGAGCAAGTTTCTCTCT
JMSF023G12+           CACGACGCTCTCCGAGATCCCACCACATTCTTGTACCCAACAGAGAGCAAGTTTCTCTCT
                      ____________________________________________________________
consensus             CACGACGCTCTCCGAGATCCCACCACATTCTTGTACCCAACAGAGAGCAAGTTTCTCTCT
 
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JMSF022K22+           TCCACACTCAATTCCAAATCCATTTTTGCCACATCCTTCAAGGTATCCACCATTTCATCG
JMSF023G12+           TCCACACTCAATTCCAAATCCATTTTTGCCACATCCTTCAAGGTATCCACCATTTCATCG
                      ____________________________________________________________
consensus             TCCACACTCAATTCCAAATCCATTTTTGCCACATCCTTCAAGGTATCCACCATTTCATCG
 
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JMSF022K22+           TAGCGCTCAGCTTGTTCAGCTAGCCTGGCGAGATAGACGAAGTTATCGCGATCTTTGGAA
JMSF023G12+           TAGCGCTCAGCTTGTTCAGCTAGCCTGGCGAGATAGACGAAGTTATCGCGATCTTTGGAA
                      ____________________________________________________________
consensus             TAGCGCTCAGCTTGTTCAGCTAGCCTGGCGAGATAGACGAAGTTATCGCGATCTTTGGAA
 
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JMSF022K22+           GCCATAGCTGATCGGTTTCAGAGGTTTTTGGCAGGTAATAGGGTTTAATCGACGACGAGC
JMSF023G12+           GCCATAGCTGATCGGTTTCAGAGGTTTTTGGCAGGTAATAGGGTTTAATCGACGACGAGC
                      ____________________________________________________________
consensus             GCCATAGCTGATCGGTTTCAGAGGTTTTTGGCAGGTAATAGGGTTTAATCGACGACGAGC