Contig 005087:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023C08Sequence310005087 (2)770024565ref|XP_008365616.1|2e-35PREDICTED: protein MEI2-like 2 [Malus domestica]
JMSF042N06Sequence102005087 (2)568012135 (2)ref|XP_006360001.1|3e-77PREDICTED: protein MEI2-like 2-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF023C08+                                                             AGNTANAATA
                      ____________________________________________________________
consensus                                                               AGNTANAATA
 
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JMSF023C08+           TANTANTANGAGGGAGATGAAAGGAGAGANACGAAGACCANAAACANTTCCGTAGANNCA
                      ____________________________________________________________
consensus             TANTANTANGAGGGAGATGAAAGGAGAGANACGAAGACCANAAACANTTCCGTAGANNCA
 
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JMSF042N06+                                                               CAGAGAGA
JMSF023C08+           GAGAAATTGTTTTNTTTTANTCTTTCNCTTCTCNCCCNCCNGAAAACANGTGCAGAGAGA
                      ____________________________________________________________
consensus             GAGAAATTGTTTTNTTTTANTCTTTCNCTTCTCNCCCNCCNGAAAACANGTGCAGAGAGA
 
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JMSF042N06+           GAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAAAAAGCTGGGTTTAGATATTAAGAA
JMSF023C08+           GAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAAAAAGCTGGGTTTAGATATTAAGAA
                      ____________________________________________________________
consensus             GAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAAAAAGCTGGGTTTAGATATTAAGAA
 
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JMSF042N06+           AAGAGACGAAACCCAGAATTGAAGA                                   
JMSF023C08+           AAGAGACGAAACCCAGAATTGAAGAAGCCCCAACACATCAGACATACAAAGGTTAAGGCG
                      ____________________________________________________________
consensus             AAGAGACGAAACCCAGAATTGAAGAAGCCCCAACACATCAGACATACAAAGGTTAAGGCG
 
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JMSF023C08+           CACAGGCAGAAGAGGAAGTGGAGTATGATTGGAGGAAAAGGACTAAATCAAGTATCTGTC
                      ____________________________________________________________
consensus             CACAGGCAGAAGAGGAAGTGGAGTATGATTGGAGGAAAAGGACTAAATCAAGTATCTGTC