Contig 005086:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045O11Sequence627005086 (4)emb|CDP07472.1|9e-39unnamed protein product [Coffea canephora]655001210 (3)gb|KDO84665.1|8e-69hypothetical protein CISIN_1g0093712mg, partial [Citrus sinensis]
JMSF006B05Sequence265005086 (4)ref|XP_006341977.1|1e-13PREDICTED: putative GTP-binding protein 6-like [Solanum tuberosum]
JMSF022P24Sequence676005086 (4)ref|XP_006341977.1|1e-56PREDICTED: putative GTP-binding protein 6-like [Solanum tuberosum]721001210 (3)gb|KDO84665.1|3e-121hypothetical protein CISIN_1g0093712mg, partial [Citrus sinensis]
JMSF052K05Sequence678005086 (4)ref|XP_006341977.1|2e-62PREDICTED: putative GTP-binding protein 6-like [Solanum tuberosum]956001210 (3)ref|XP_011074988.1|5e-167PREDICTED: putative GTP-binding protein 6 [Sesamum indicum]

Alignment

This contig is upended


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JMFF045O11+                                                         CAACTTCAAACGCA
                      ____________________________________________________________
consensus                                                           CAACTTCAAACGCA
 
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JMFF045O11+           TGGATTGCACTTTTTATTTCTGCAACTTTACCAGACCCNATATATGTCCTAGGATTTGGA
JMSF052K05+                              CTGCAACTTTACCAGACCCTATATATGTCCTAGGATTTGGA
JMSF022P24+                                                       TGTCCTAGGATTTGGA
                      ____________________________________________________________
consensus             TGGATTGCACTTTTTATTTCTGCAACTTTACCAGACCCTATATATGTCCTAGGATTTGGA
 
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JMFF045O11+           GTGGATAGTTTNTGATATGTAGAACCAACAACAAGTAGTCCAGCAGTGTCAGCCAGTTGG
JMSF052K05+           GTGGATAGTTTTTGATATGTAGAACCAACAACAAGTAGTCCAGCAGTGTCAGCCAGTTGG
JMSF022P24+           GTGGATAGTTTTTGATATGTAGAACCAACAACAAGTAGTCCAGCAGTGTCAGCCAGTTGG
                      ____________________________________________________________
consensus             GTGGATAGTTTTTGATATGTAGAACCAACAACAAGTAGTCCAGCAGTGTCAGCCAGTTGG
 
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JMFF045O11+           GCCAGCTCTTTCAGTGATTCGTCTATACCAAATGAATCATCAATATTGTTTTTGCACGCA
JMSF052K05+           GCCAGCTCTTTCAGTGATTCGTCTATACCAAATGAATCATCAATATTGTTTTTGCACGCA
JMSF022P24+           GCCAGCTCTTTCAGTGATTCGTCTATACCAAATGAATCATCAATATTGTTTTTGCACGCA
                      ____________________________________________________________
consensus             GCCAGCTCTTTCAGTGATTCGTCTATACCAAATGAATCATCAATATTGTTTTTGCACGCA
 
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JMFF045O11+           ACTCC--CTAGATAGGCTTTCTCTTCAAAAACCTCTCTTCCATTACGTAGCGTGAACCGA
JMSF052K05+           ACTCCCACTAGATAGGCTTTCTCTTCAAAAACCTCTCTTCCATTACGTAGCGTGAACCGG
JMSF022P24+           ACTCCCACTAGATAGGCTTTCTCTTCAAAAACCTCTCTTCCATTACGTAGCGTGAACCGG
                      ____________________________________________________________
consensus             ACTCCCACTAGATAGGCTTTCTCTTCAAAAACCTCTCTTCCATTACGTAGCGTGAACCGG
 
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JMFF045O11+           CCATCAGAATCATCATTCTCCTCCACCTGCGCCCCTTTCTTCCTCTCGATCTTCTTCAAC
JMSF052K05+           CCATCAGAATCATCATTCTCCTCCACCTGCGCCCCTTTCTTCCTCTCGATCTTCTTCAAC
JMSF022P24+           CCATCAGAATCATCATTCTCCTCCACCTGCGCCCCTTTCTTCCTCTCGATCTTCTTCAAC
                      ____________________________________________________________
consensus             CCATCAGAATCATCATTCTCCTCCACCTGCGCCCCTTTCTTCCTCTCGATCTTCTTCAAC
 
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JMFF045O11+           ACCGAGGTTTGAGAATTTTCTTCTGCTTCGGTACTTGCAGCTCCATTGAACCCTTGGTGA
JMSF052K05+           ACCGAGGTTTGAGAATTTTCTTCTGCTTCGGTACTTGCAGCTCCATTGAACCCTTGGTGA
JMSF022P24+           ACCGAGGTTTGAGAATTTTCTTCTGCTTCGGTACTTGCAGCTCCATTGAACCCTTGGTGA
                      ____________________________________________________________
consensus             ACCGAGGTTTGAGAATTTTCTTCTGCTTCGGTACTTGCAGCTCCATTGAACCCTTGGTGA
 
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JMFF045O11+           AAATCTTCCGCTTCATCTTCATCTCCGGTCTCAATCACCGGATTGCGAACCGAAACGGTA
JMSF052K05+           AAATCTTCCGCTTCATCTTCATCTCCGGTCTCAATCACCGGATTGCGAACCGAAACGGTA
JMSF006B05+                                     GGTCTCAATCACCGGATTGCGAACCGAAACGGTA
JMSF022P24+           AAATCTTCCGCTTCATCTTCATCTCCGGTCTCAATCACCGGATTGCGAACCGAAACGGTA
                      ____________________________________________________________
consensus             AAATCTTCCGCTTCATCTTCATCTCCGGTCTCAATCACCGGATTGCGAACCGAAACGGTA
 
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JMFF045O11+           TCGTCGGGCGATAAGACTCCGATTCCATCTTCCAAAGCCCTAATTGAACCACAAAAAGCG
JMSF052K05+           TCGTCGGGCGATAAGACTCCGATTCCATCTTCCAAAGCCCTAATTGAACCACAAAAAGCG
JMSF006B05+           TCGTCGGGCGATAAGACTCCGATTCCATCTTCCAAAGCCCTAATTGAACCACAAAAAGCG
JMSF022P24+           TCGTCGGGCGATAAGACTCCGATTCCATCTTCCAAAGCCCTAATTGAACCACAAAAAGCG
                      ____________________________________________________________
consensus             TCGTCGGGCGATAAGACTCCGATTCCATCTTCCAAAGCCCTAATTGAACCACAAAAAGCG
 
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JMFF045O11+           CGCTTTGCTTGTCTTTGCTGAATAATTCGGAGCTGCCGGGTAGGTTTGGGAACCCATCGA
JMSF052K05+           CGCTTTGCTTGTCTTTGCTGAATAATTCGGAGCTGCCGGGTAGGTTTGGGAACCCATCGA
JMSF006B05+           CGCTTTGCTTGTCTTTGCTGAATAATTCGGAGCTGCCGGGTAGGTTTGGGAACCCATCGA
JMSF022P24+           CGCTTTGCTTGTCTTTGCTGAATAATTCGGAGCTGCCGGGTAGGTTTGGGAACCCATCGA
                      ____________________________________________________________
consensus             CGCTTTGCTTGTCTTTGCTGAATAATTCGGAGCTGCCGGGTAGGTTTGGGAACCCATCGA
 
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JMFF045O11+           AAATGGGGTTCGGATTGTAAAATTAAAGGGTTTAAATTTGAGCAGAGGAAGCATAAGCTC
JMSF052K05+           AAATGGGGTTCGGATTGTAAAATTAAAGGGTTTAAATTTGAGCAGAGGAAGCATAAGCTC
JMSF006B05+           AAATGGGGTTCGGATTGTAAAATTAAAGGGTTTAAATTTGAGCAGAGGAAGCATAAGCTC
JMSF022P24+           AAATGGGGTTCGGATTGTAAAATTAAAGGGTTTAAATTTGAGCAGAGGAAGCATAAGCTC
                      ____________________________________________________________
consensus             AAATGGGGTTCGGATTGTAAAATTAAAGGGTTTAAATTTGAGCAGAGGAAGCATAAGCTC
 
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JMFF045O11+           ATGATAAGAGTATGC                                             
JMSF052K05+           ATGATAAGAGTATGCAAAGAAGCTCGCCAAATTCAATCAGATATATATACAGTGCCCACT
JMSF006B05+           ATGATAAGAGTATGCAAAGAAGCTCGCCAAATTCAATCAGATATATATA           
JMSF022P24+           ATGATAAGAGTATGCAAAGAAGCTCGCCAAATTCAATCAGATATATATACAGTGCCCACT
                      ____________________________________________________________
consensus             ATGATAAGAGTATGCAAAGAAGCTCGCCAAATTCAATCAGATATATATACAGTGCCCACT
 
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JMSF052K05+           CGGCCGTTATCGGGTAGTTATACTGATTTGAGGATT                        
JMSF022P24+           CGGCCGTTATCGGGTAGTTATACTGATTTGAGGATTGATTCAGTTGGCAGACTAAACATC
                      ____________________________________________________________
consensus             CGGCCGTTATCGGGTAGTTATACTGATTTGAGGATTGATTCAGTTGGCAGACTAAACATC