Contig 005083:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019J22+                    CTCGAAAAAAATTTNCAATTATNAGCTTAAATTAATAGNGGTAAAATTCG
                      ____________________________________________________________
consensus                       CTCGAAAAAAATTTNCAATTATNAGCTTAAATTAATAGNGGTAAAATTCG
 
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rJMSF019J22+          TAAGGTAAAGAAACAATTAAATGTCNTTGGNCTAATAGTACTTTTGGAAATAGNATTACC
                      ____________________________________________________________
consensus             TAAGGTAAAGAAACAATTAAATGTCNTTGGNCTAATAGTACTTTTGGAAATAGNATTACC
 
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rJMSF019J22+          CAAATGAAATAGCCCTNATNTACNCTTACCTTTTAGNAGNTNTATTGCCCTTTGNGCCNT
                      ____________________________________________________________
consensus             CAAATGAAATAGCCCTNATNTACNCTTACCTTTTAGNAGNTNTATTGCCCTTTGNGCCNT
 
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rJMSF019J22+          ATGCAAAATTAGGGNTNCTGNGCCCTTTAAAAACNCAGNTCTGTACTCAGNTNTTCCNTG
                      ____________________________________________________________
consensus             ATGCAAAATTAGGGNTNCTGNGCCCTTTAAAAACNCAGNTCTGTACTCAGNTNTTCCNTG
 
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rJMSF019J22+          CNTCNCTTCGNTGNAGNAATATNCGNATCNATNTGTTNTAATGNAAAAATATAAATGNAT
                      ____________________________________________________________
consensus             CNTCNCTTCGNTGNAGNAATATNCGNATCNATNTGTTNTAATGNAAAAATATAAATGNAT
 
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rJMSF019J22+          GTTAGTCNTNTTAGGNATTCGCNGNTATACCTTTCNATATATAAGNTTAAATTGNAAAAA
JMSF050C02+                                                                  AAAAA
                      ____________________________________________________________
consensus             GTTAGTCNTNTTAGGNATTCGCNGNTATACCTTTCNATATATAAGNTTAAATTGNAAAAA
 
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rJMSF019J22+          AAAAATGAAAGCCATCTGCGATTTGATGAATCGCACAAATTACTCAGCAAGAGTAATTTT
JMSF050C02+           AAAAATGAAAGCCATNTGCGATTTGATGAATCGCNCAAATTACTCAGCAAGNGTAATTTT
                      ____________________________________________________________
consensus             AAAAATGAAAGCCATCTGCGATTTGATGAATCGCACAAATTACTCAGCAAGAGTAATTTT
 
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rJMSF019J22+          CTAAACGCTACTGGGAGCAACGTTTCTCCCTTGGCTGATTCTATTTCTTCTCCATTTCTT
JMSF050C02+           NTAAACGNTGNTGGGNGCAACGTTTCTCCCTTGGNTAATTCTATTTNTTCTCCATTTNTT
                      ____________________________________________________________
consensus             CTAAACGCTGCTGGGAGCAACGTTTCTCCCTTGGCTGATTCTATTTCTTCTCCATTTCTT
 
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rJMSF019J22+          CTAAAAAGTCTAAATTATCCCTGATCTCATCTTCAACCAAAATCTCACCG----TCAGTA
JMSF050C02+           CTAAAAAGTNTAAATTATCCCTGATNTCATCTTCATCCAAAATNTCACCGATATTCNGTA
                      ____________________________________________________________
consensus             CTAAAAAGTCTAAATTATCCCTGATCTCATCTTCATCCAAAATCTCACCGATATTCAGTA
 
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rJMSF019J22+          AAGGAACAAAATAATGGAAAACACTACCGCCTCTTCTTCTCCTCCCCTCACATGGAGCTA
JMSF050C02+           AAGGAACAAAATAATGGAAAACNCTACCGCCTTTTNTTNTCCTCCCCTCNCANGGNGCTA
                      ____________________________________________________________
consensus             AAGGAACAAAATAATGGAAAACACTACCGCCTTTTCTTCTCCTCCCCTCACATGGAGCTA
 
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rJMSF019J22+          TGGAACAGAACAGAATGGAAGAAAATTCACAAATTAAAAACAAATTAAAAAAATAATGAA
JMSF050C02+           TGGAACAGAACNGAATGGAAGAAAATTCNCAAATTAAAAACAAATTAAAAAAATAATGAA
                      ____________________________________________________________
consensus             TGGAACAGAACAGAATGGAAGAAAATTCACAAATTAAAAACAAATTAAAAAAATAATGAA
 
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rJMSF019J22+          AC                                                          
JMSF050C02+           ACTGNCTATTAACCCATCNCAGAAATCATNTTCATNTTCAAAACTCAACATACGAACTAT
                      ____________________________________________________________
consensus             ACTGNCTATTAACCCATCNCAGAAATCATNTTCATNTTCAAAACTCAACATACGAACTAT
 
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JMSF050C02+           ATTTTTTAATTCNCAAAAAAAAAAATTAAAAACCAGATTTGCATTTCTTGCCCACCGCTT
                      ____________________________________________________________
consensus             ATTTTTTAATTCNCAAAAAAAAAAATTAAAAACCAGATTTGCATTTCTTGCCCACCGCTT
 
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JMSF050C02+           CTTGCTTCTCTGATTCTTGCCTTCTGCCATCTCCAATAACCAGATCTTCATCCTCTGCTT
JMSF022K06+                  CTCTGATTCTTGCCTTCTGCCATCTCCAATAACCAGATCTTCATCCTCTGCTT
                      ____________________________________________________________
consensus             CTTGCTTCTCTGATTCTTGCCTTCTGCCATCTCCAATAACCAGATCTTCATCCTCTGCTT
 
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JMSF050C02+           CTCATCTTCTTCTTCGCCGTCTTCGCTTCGAAATTGCCGTTTCTTTTCGCTGCTTCGCAT
JMSF022K06+           CTCATCTTCTTCTTCGCCGTCTTCGCTTCGAAATTGCCGTTTCTTTTCGCTGCTTCGCAT
                      ____________________________________________________________
consensus             CTCATCTTCTTCTTCGCCGTCTTCGCTTCGAAATTGCCGTTTCTTTTCGCTGCTTCGCAT
 
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JMSF050C02+           CGTTCGCAGAGGAAGTTGGGTAGGGATTGGGAAT                          
JMSF022K06+           CGTTCGCAGAGGAAGTTGGGTAGGGATTGGGAATGGGTTGTGGGTAAGTGGATTTGGCTC
                      ____________________________________________________________
consensus             CGTTCGCAGAGGAAGTTGGGTAGGGATTGGGAATGGGTTGTGGGTAAGTGGATTTGGCTC