Contig 005082:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF022J09-                      CCAATAATGGGTATGGTGTGGATAATGTTAACTTCAATATACAACTAT
                      ____________________________________________________________
consensus                         CCAATAATGGGTATGGTGTGGATAATGTTAACTTCAATATACAACTAT
 
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rJMSF022J09-          GAAAAGGAGTCAACTGCACTATGATGCCAAGCCAGTAGGATCAGGAGTGTTCAGTATGAC
                      ____________________________________________________________
consensus             GAAAAGGAGTCAACTGCACTATGATGCCAAGCCAGTAGGATCAGGAGTGTTCAGTATGAC
 
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rJMSF022J09-          TAGACATAATCACGGAACTAACACCAACTTCATGTTTCTGGGGTTTCTGGGGAAAAGAGA
                      ____________________________________________________________
consensus             TAGACATAATCACGGAACTAACACCAACTTCATGTTTCTGGGGTTTCTGGGGAAAAGAGA
 
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rJMSF022J09-          TCCGATCCTTTGACCATTCTTCTAAAGCTTTGCGGTGGAGAGCGTTCATCCTGATATAAG
                      ____________________________________________________________
consensus             TCCGATCCTTTGACCATTCTTCTAAAGCTTTGCGGTGGAGAGCGTTCATCCTGATATAAG
 
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rJMSF022J09-          GCCTCCTTTCTCGGATAAACTTTTCAGCAGTTTTCCAGTCGTCTGCAATGCCCAGAGCTA
                      ____________________________________________________________
consensus             GCCTCCTTTCTCGGATAAACTTTTCAGCAGTTTTCCAGTCGTCTGCAATGCCCAGAGCTA
 
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rJMSF022J09-          CTAACAGCGCGCACATGACTGCAACACTTCGCCCATGACCATATGCACAATGAACAAAAA
                      ____________________________________________________________
consensus             CTAACAGCGCGCACATGACTGCAACACTTCGCCCATGACCATATGCACAATGAACAAAAA
 
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rJMSF022J09-          CCGGGATCTTCTGAGCTCTTTTTCGACAAGCCCATTTCACAGCAGCCTCAATATCAGCTG
                      ____________________________________________________________
consensus             CCGGGATCTTCTGAGCTCTTTTTCGACAAGCCCATTTCACAGCAGCCTCAATATCAGCTG
 
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rJMSF022J09-          GCTGGGGTGACCTAGTATCCCATGTTGGAACACAGAAGTATGCATGATTTCCAGAGAGCT
JMFN014E17+                                    TGGAACACAGAAGTATGCATGATNTCCAGAGAGCT
JMSF022J09+                                    TGGAACACAGAAGTATGCATGATTTCCAGAGAGCT
                      ____________________________________________________________
consensus             GCTGGGGTGACCTAGTATCCCATGTTGGAACACAGAAGTATGCATGATTTCCAGAGAGCT
 
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rJMSF022J09-          CCAACTTCCTTGGCAACTCACAAGTACAATCAATAATAGCAGGTCTACCTGGTGGCAGTT
JMFN014E17+           CCAACTTCCTTGGCAACTCACAAGTACAATCAATAATAGCAGGTCTACCTGGTGGCAGTT
JMSF022J09+           CCAACTTCCTTGGCAACTCACAAGTACAATCAATAATAGCAGGTCTACCTGGTGGCAGTT
                      ____________________________________________________________
consensus             CCAACTTCCTTGGCAACTCACAAGTACAATCAATAATAGCAGGTCTACCTGGTGGCAGTT
 
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rJMSF022J09-          TATCAGGTGAAGAAGGCCA-CCCCCCTACATACAAACCCTCACATATCTCAGAATAAGGA
JMFN014E17+           TATCAGGTGAAGAAGGCCA-CCCCCCTACATACAAACCCTCACATATCTCAGAATAAGGA
JMSF022J09+           TATCAGGTGAAGAAGGCCACCCCCCCTTACTACAAACCCTCACATATCTCAGAATAAGGA
                      ____________________________________________________________
consensus             TATCAGGTGAAGAAGGCCA-CCCCCCTACATACAAACCCTCACATATCTCAGAATAAGGA
 
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rJMSF022J09-          GGCTCCCCACTTCTCAGTCTTCTCAATGCTGAGAAGGCCCTCACAAAGTACAAGTATGGG
JMFN014E17+           GGCTCCCCACTTCTCAGTCTTCTCAATGCTGAGAAGGCCCTCACAAAGTACAAGTATGGG
JMSF022J09+           GGCTCCCCACTTCTCAGTCTTCTCAATGCTGAGAAGGCCCTCACAAAGTACAAGTATGGG
                      ____________________________________________________________
consensus             GGCTCCCCACTTCTCAGTCTTCTCAATGCTGAGAAGGCCCTCACAAAGTACAAGTATGGG
 
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rJMSF022J09-          CTGAACATGACAAGGGACCATAGTGGGAAAGTCCCATCAGAGCCTTTGCCCAATAGGATT
JMFN014E17+           CTGAACATGACAAGGGACCATAGTGGGAAAGTCCCATCAGAGCCTTTGCCCAATAGGATT
JMSF022J09+           CTGAACATGACAAGGGACCATAGTGGGAAAGTCCCATCAGAGCCTTTGCCCAATAGGATT
                      ____________________________________________________________
consensus             CTGAACATGACAAGGGACCATAGTGGGAAAGTCCCATCAGAGCCTTTGCCCAATAGGATT
 
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rJMSF022J09-          GGGAGATTGATTAATGGGTTAGAGGCTATTGAA                           
JMFN014E17+           GGGAGATTGATTAATGGGTTAGAGGCTATTGAAACCAATAAAGATATAAGTGATGCATAG
JMSF022J09+           GGGAGATTGATTAATGGGTTAGAGGCTATTGAAACCAATAAAGATATAAGTGATGCATAG
                      ____________________________________________________________
consensus             GGGAGATTGATTAATGGGTTAGAGGCTATTGAAACCAATAAAGATATAAGTGATGCATAG
 
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JMFN014E17+           AGAACAGGGAATGATAACAGAACGAAACCAAGATTCCTAAGATACACAAAAATTATGAAT
JMSF022J09+           AGAACAGGGAATGATAACAGAACGAAACCAAGATTCCTAAGATACACAAAAATTATGAAT
                      ____________________________________________________________
consensus             AGAACAGGGAATGATAACAGAACGAAACCAAGATTCCTAAGATACACAAAAATTATGAAT
 
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JMFN014E17+           AAAGTTGCTGCCTTTATCCCTACCAGCACAGAAATTCCGACACCCATTTTAAGTTTCCTG
JMSF022J09+           AAAGTTGCTGCCTTTATCCCTACCAGCACAGAAATTCCGACACCCATTTTAAGTTTCCTG
                      ____________________________________________________________
consensus             AAAGTTGCTGCCTTTATCCCTACCAGCACAGAAATTCCGACACCCATTTTAAGTTTCCTG
 
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JMFN014E17+           AAGAAACAACACAGCTTCTGAAGAAAATGAAGTAAATGCTGTGCAGAAGTGAAAAACTGA
JMSF022J09+           AAGAAACAACACAGCTTCTGAAGAAAATGAAGTAAATGCTGTGCAGAAGTGAAAAACTGA
                      ____________________________________________________________
consensus             AAGAAACAACACAGCTTCTGAAGAAAATGAAGTAAATGCTGTGCAGAAGTGAAAAACTGA
 
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JMFN014E17+           GAGAGTTCGAGTGACTTTTCTGAATATAAAATGAAGAGAAATTCACCGGTCGATCACTGA
JMSF022J09+           GAGAGTTCGAGTGACTTTTCTGAATATAAAATGAAGAGAAATTCACCGGTCGATCACTGA
                      ____________________________________________________________
consensus             GAGAGTTCGAGTGACTTTTCTGAATATAAAATGAAGAGAAATTCACCGGTCGATCACTGA
 
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JMFN014E17+           ACGGAAGAGCAGATGCAATG                                        
JMSF022J09+           ACGGAAGAGCAGATGCAATGGAGCGTATGGGCTGTTTGGCTCTGATCTGTGGCCTCGATC
                      ____________________________________________________________
consensus             ACGGAAGAGCAGATGCAATGGAGCGTATGGGCTGTTTGGCTCTGATCTGTGGCCTCGATC