Contig 005078:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022F22Sequence185005078 (5)137005078 (5)
JMSF024F22Sequence185005078 (5)124005078 (5)
JMSF025F22Sequence595000761 (6)125005078 (5)

Alignment

This contig is upended


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JMSF024F22-                                                                  GGTTG
rJMSF022F22+                                                                 GGTTG
rJMSF024F22+                                                                 GGTTG
rJMSF025F22+                                                                 GGTTG
JMSF022F22-                                                                  GGTTG
                      ____________________________________________________________
consensus                                                                    GGTTG
 
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JMSF024F22-           TTTAGGTAGTTCATTTGGGAACACAAATTGAACTTGAGCTCTTGTTTTTGTAGGTTTCTA
rJMSF022F22+          TTTAGGTAGTTCATTTGGGAACACAAATTGAACTTGAGCTCTTGTTTTTGTAGGTTTCTA
rJMSF024F22+          TTTAGGTAGTTCATTTGGGAACACAAATTGAACTTGAGCTCTTGTTTTTGTAGGTTTCTA
rJMSF025F22+          TTTAGGTAGTTCATTTGGGAACACAAATTGAACTTGAGCTCTTGTTTTTGTAGGTTTCTA
JMSF022F22-           TTTAGGTAGTTCATTTGGGAACACAAATTGAACTTGAGCTCTTGTTTTTGTAGGTTTCTA
                      ____________________________________________________________
consensus             TTTAGGTAGTTCATTTGGGAACACAAATTGAACTTGAGCTCTTGTTTTTGTAGGTTTCTA
 
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JMSF024F22-           ATTCTGTCTTTTTCCTTCTGTGCTGAACTTTGTTCTCTTGTGGATGTGCTAGTCATACTT
rJMSF022F22+          ATTCTGTCTTTTTCCTTCTGTGCTGAACTTTGTTCTCTTGTGGATGTGCTAGTCATACTT
rJMSF024F22+          ATTCTGTCTTTTTCCTTCTGTGCTGAACTTTGTTCTCTTGTGGATGTGCTAGTCATACT 
rJMSF025F22+          ATTCTGTCTTTTTCCTTCTGTGCTGAACTTNGTTCTCTTGTGGATGTGC           
JMSF022F22-           ATTCTGTCTTTTTCCTTCTGTGCTGAACTTTGTTCTCTTGTGGATGTGCTAGTCATACTT
                      ____________________________________________________________
consensus             ATTCTGTCTTTTTCCTTCTGTGCTGAACTTTGTTCTCTTGTGGATGTGCTAGTCATACTT
 
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JMSF024F22-           TTCAACACTTTTTTGTATTGGTTGTCTCTTCTATATGAAATTTTTGTAGNANAAAAAAAA
rJMSF022F22+          TTCAACACTTTT                                                
JMSF022F22-           TTCAACACTTTTTTGTATTGGTTGTCTCTTCTATATGAAATTTTTGTAGTAAAAAAAAAA
                      ____________________________________________________________
consensus             TTCAACACTTTTTTGTATTGGTTGTCTCTTCTATATGAAATTTTTGTAGTAAAAAAAAAA