Contig 005076:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF022D08+                                                                TTTTTTT
                      ____________________________________________________________
consensus                                                                  TTTTTTT
 
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JMFN040H08+                           AAATCAAATCACATTCCATTTAGTAGCCAAAAACAGTTGTCCAA
JMSF022D08+           NTTAGACATCACATATAAATCAAATCACATTCCATTTAGTAGCCAAAAACAGTTGTCCAA
                      ____________________________________________________________
consensus             NTTAGACATCACATATAAATCAAATCACATTCCATTTAGTAGCCAAAAACAGTTGTCCAA
 
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JMFN040H08+           ACTGAAAATATAAGTAAAAATAACTTGATCAAAACATAGACTTGATTATCCCACACAACC
JMSF022D08+           ACTGAAAATATAAGTAAAAATAACTTGATCAAAACATAGACTTGATTATCCCACACAACC
                      ____________________________________________________________
consensus             ACTGAAAATATAAGTAAAAATAACTTGATCAAAACATAGACTTGATTATCCCACACAACC
 
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JMFN040H08+           AATGGTTTCCAACTAGTAATCATTACGTCAAAACAACTTAACAAGGCATCAAAAGGTATT
JMSF022D08+           AATGGTTTCCAACTAGTAATCATTACGTCAAAACAACTTAACAAGGCATCAAAAGGTATT
                      ____________________________________________________________
consensus             AATGGTTTCCAACTAGTAATCATTACGTCAAAACAACTTAACAAGGCATCAAAAGGTATT
 
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JMFN040H08+           CAAGACCCTTCATAGTACTTTGATAGATAAAGCCATCACCGCAATCTCCTAGCCTCTCTC
rJMSF022D08-                                            ATCACCGCAATCTCCTAGCCTCTCTC
JMSF022D08+           CAAGACCCTTCATAGTACTTTGATAGATAAAGCCATCACCGCAATCTCCTAGCCTCTCTC
                      ____________________________________________________________
consensus             CAAGACCCTTCATAGTACTTTGATAGATAAAGCCATCACCGCAATCTCCTAGCCTCTCTC
 
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JMFN040H08+           TCAGACTCGAGGAGGGTGAGGACATCACCCTCTCTGACTGGTCCCTTCACATTCCTCATA
rJMSF022D08-          TCAGACTCGAGGAGGGTGAGGACATCACCCTCTCTGACTGGTCCCTTCACATTCCTCATA
JMSF022D08+           TCAGACTCGAGGAGGGTGAGGACATCACCCTCTCTGACTGGTCCCTTCACATTCCTCATA
                      ____________________________________________________________
consensus             TCAGACTCGAGGAGGGTGAGGACATCACCCTCTCTGACTGGTCCCTTCACATTCCTCATA
 
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JMFN040H08+           ATAAACCTGTTTTGGTCATCAATAAACTTTACCCTGACTTGAGTTACCTGTCCTCTGGAT
rJMSF022D08-          ATAAACCTGTTTTGGTCATCAATAAACTTTACCCTGACTTGAGTTACCTGTCCTCTGGAT
JMSF022D08+           ATAAACCTGTTTTGGTCATCAATAAACTTTACCCTGACTTGAGTTACCTGTCCTCTGGAT
                      ____________________________________________________________
consensus             ATAAACCTGTTTTGGTCATCAATAAACTTTACCCTGACTTGAGTTACCTGTCCTCTGGAT
 
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JMFN040H08+           CCAGTGCGACCCATAACCTTCACCACAATTGCATGCTTGATTTGAGATTCCATTCGGATT
rJMSF022D08-          CCAGTGCGACCCATAACCTTCACCACAATTGCATGCTTGATTTGAGATTCCATTCGGATT
JMSF022D08+           CCAGTGCGACCCATAACCTTCACCACAATTGCATGCTTGATTTGAGATTCCATTCGGATT
                      ____________________________________________________________
consensus             CCAGTGCGACCCATAACCTTCACCACAATTGCATGCTTGATTTGAGATTCCATTCGGATT
 
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JMFN040H08+           TTCAGCGGCCCGGATCTATGTTGTACGCTTTGCAGACGATGACCCTGAGAGGTGACCGGT
rJMSF022D08-          TTCAGCGGCCCGGATCTATGTTGTACGCTTTGCAGACGATGACCCTGAGAGGTGACCGGT
JMSF022D08+           TTCAGCGGCCCGGATCTATGTTGTACGCTTTGCAGACGATGACCCTGAGAGGTGACCGGT
                      ____________________________________________________________
consensus             TTCAGCGGCCCGGATCTATGTTGTACGCTTTGCAGACGATGACCCTGAGAGGTGACCGGT
 
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JMFN040H08+           GAATGGTGAGATTGTGAGAGGGCGGCAAGC                              
rJMSF022D08-          GAATGGTGAGATTGTGAGAGGGCGGCAAGCGGAGGCCGGAGACAGAGATGGTGAGTCCGT
JMSF022D08+           GAATGGTGAGATTGTGAGAGGGCGGCAAGCGGAGGCCGGAGACAGAGATGGTGAGTCCGT
                      ____________________________________________________________
consensus             GAATGGTGAGATTGTGAGAGGGCGGCAAGCGGAGGCCGGAGACAGAGATGGTGAGTCCGT