Contig 005071:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS041D01Sequence625005071 (2)ref|XP_009757134.1|158PREDICTED: uncharacterized protein LOC104210037 [Nicotiana sylvestris] ref|XP_00
JMSF021M13Sequence700005071 (2)ref|XP_009757134.1|183PREDICTED: uncharacterized protein LOC104210037 [Nicotiana sylvestris] ref|XP_00787020378gb|KCW86106.1|2e-61hypothetical protein EUGRSUZ_B02804 [Eucalyptus grandis]

Alignment

This contig is upended


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JMSF021M13+                               TGAAATGCCACAGTACATATTTCATACATAAACTTCTGCA
                      ____________________________________________________________
consensus                                 TGAAATGCCACAGTACATATTTCATACATAAACTTCTGCA
 
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JMFS041D01+                           TTCAAGCGAATCATCCAATTCACTTGAATACAATCCCTGAATGG
JMSF021M13+           CCCATGCCCAAGATGTTTCAAGCGAATCATCCAATTCACTTGAATACAATCCCTGAATGG
                      ____________________________________________________________
consensus             CCCATGCCCAAGATGTTTCAAGCGAATCATCCAATTCACTTGAATACAATCCCTGAATGG
 
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JMFS041D01+           CAACTTTGAACAGCATACTACGAAATATCTCAATTCCACATGTAATAGACTGTCTAGCAA
JMSF021M13+           CAACTTTGAACAGCATACTACGAAATATCTCAATTCCACATGTAATAGACTGTCTAGCAA
                      ____________________________________________________________
consensus             CAACTTTGAACAGCATACTACGAAATATCTCAATTCCACATGTAATAGACTGTCTAGCAA
 
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JMFS041D01+           CAGCAGGTGTGTCATCCTTAAGGGCAGTGATCAATAAAGGTATGATTGCAGGTAGGAATT
JMSF021M13+           CAGCAGGTGTGTCATCCTTAAGGGCAGTGATCAATAAAGGTATGATTGCAGGTAGGAATT
                      ____________________________________________________________
consensus             CAGCAGGTGTGTCATCCTTAAGGGCAGTGATCAATAAAGGTATGATTGCAGGTAGGAATT
 
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JMFS041D01+           CAATATGTCTGATCCCAATAGGACTGAGCATCTCTATTGTGAATTTGCGAACTGGACTAA
JMSF021M13+           CAATATGTCTGATCCCAATAGGACTGAGCATCTCTATTGTGAATTTGCGAACTGGACTAA
                      ____________________________________________________________
consensus             CAATATGTCTGATCCCAATAGGACTGAGCATCTCTATTGTGAATTTGCGAACTGGACTAA
 
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JMFS041D01+           ATCGATCGGAGACGAAGTCGAGGAGAAGAGGGAGGAACTCCGTGAGCAAGATGGAGTCGG
JMSF021M13+           ATCGATCGGAGACGAAGTCGAGGAGAAGAGGGAGGAACTCCGTGAGCAAGATGGAGTCGG
                      ____________________________________________________________
consensus             ATCGATCGGAGACGAAGTCGAGGAGAAGAGGGAGGAACTCCGTGAGCAAGATGGAGTCGG
 
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JMFS041D01+           CGTCGGATACCTCATCCTTGAGCCGGCGCAAGTAGCCCATCTTTGATGGAACGGCTGCAG
JMSF021M13+           CGTCGGATACCTCATCCTTGAGCCGGCGCAAGTAGCCCATCTTTGATGGAACGGCTGCAG
                      ____________________________________________________________
consensus             CGTCGGATACCTCATCCTTGAGCCGGCGCAAGTAGCCCATCTTTGATGGAACGGCTGCAG
 
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JMFS041D01+           CAAGCTTGGAGGAGTTCAGAAGATCCGCTACTTTCTCTCTGGAAACTGCCGCCATCATTC
JMSF021M13+           CAAGCTTGGAGGAGTTCAGAAGATCCGCTACTTTCTCTCTGGAAACTGCCGCCATCATTC
                      ____________________________________________________________
consensus             CAAGCTTGGAGGAGTTCAGAAGATCCGCTACTTTCTCTCTGGAAACTGCCGCCATCATTC
 
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JMFS041D01+           CGACCATTGCTCCTCGCAACGAAACCCTAGTTCTCCGAGCTTCAGTCACCAAAGTTTCAT
JMSF021M13+           CGACCATTGCTCCTCGCAACGAAACCCTAGTTCTCCGAGCTTCAGTCACCAAAGTTTCAT
                      ____________________________________________________________
consensus             CGACCATTGCTCCTCGCAACGAAACCCTAGTTCTCCGAGCTTCAGTCACCAAAGTTTCAT
 
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JMFS041D01+           GGAGAATTCGAGCGCGGAAGATAGAATGATAGAGAGAGAGCTGTAGACTACCGTCGCCAG
JMSF021M13+           GGAGAATTCGAGCGCGGAAGATAGAATGATAGAGAGAGAGCTGTAGACTACCGTCGCCAG
                      ____________________________________________________________
consensus             GGAGAATTCGAGCGCGGAAGATAGAATGATAGAGAGAGAGCTGTAGACTACCGTCGCCAG
 
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JMFS041D01+           ATTGAAATGATGGCCTTTTGGGAGGGTGAAAGGTTTAACGCAGCAGTACGGATTTTGGGA
JMSF021M13+           ATTGAAATGATGGCCTTTTGGGAGGGTGAAAGGTTTAACGCAGCAGTACGGATTTTGGGA
                      ____________________________________________________________
consensus             ATTGAAATGATGGCCTTTTGGGAGGGTGAAAGGTTTAACGCAGCAGTACGGATTTTGGGA
 
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JMFS041D01+           GGGAATTCCCACGCCGGAGGCCGG                                    
JMSF021M13+           GGGAATTCCCACGCCGGAGGCCGGAGCTTTCACGACGGCCTTTAAACTCTTTAACTCGTC
                      ____________________________________________________________
consensus             GGGAATTCCCACGCCGGAGGCCGGAGCTTTCACGACGGCCTTTAAACTCTTTAACTCGTC