Contig 005067:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN039P08Sequence623005067 (4)ref|XP_004238403.1|2e-11PREDICTED: rop guanine nucleotide exchange factor 1-like [Solanum lycopersicum]
JMSF007K23Sequence356005067 (4)756021370ref|XP_004292925.1|1e-11PREDICTED: rop guanine nucleotide exchange factor 1-like [Fragaria vesca subsp.
JMSF020P01Sequence641005067 (4)705018199
JMSF038B07Sequence647023255gb|EYU36815.1|2e-55hypothetical protein MIMGU_mgv1a003992mg [Erythranthe guttata]934005067 (4)ref|XP_004238403.1|3e-90PREDICTED: rop guanine nucleotide exchange factor 1-like [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038B07- CATCCATCC
                      ____________________________________________________________
consensus CATCCATCC
 
. : . : . : . : . : . :
rJMSF038B07- GCAGTCCTCTAGCTTGAACGAATTGTATAGTAATATACATGTACTTAGTTATAATGCATT
                      ____________________________________________________________
consensus GCAGTCCTCTAGCTTGAACGAATTGTATAGTAATATACATGTACTTAGTTATAATGCATT
 
. : . : . : . : . : . :
rJMSF038B07- TAATTGCTTGGCCAAAACATGAAAATGCAGGTATATAGAAGTACATTGAGTCCTTTGTTA
                      ____________________________________________________________
consensus TAATTGCTTGGCCAAAACATGAAAATGCAGGTATATAGAAGTACATTGAGTCCTTTGTTA
 
. : . : . : . : . : . :
rJMSF038B07- AGGTATGACGTCAGTGGCAGTGGCACCACACCTAATACTCTCCTAACTATACTTTACCTT
                      ____________________________________________________________
consensus AGGTATGACGTCAGTGGCAGTGGCACCACACCTAATACTCTCCTAACTATACTTTACCTT
 
. : . : . : . : . : . :
rJMSF038B07- CTGGCTTGCATATTATGTGTTCTCCTGGAGACATCAACTAATGAGGCTGAAGGACGGAAC
                      ____________________________________________________________
consensus CTGGCTTGCATATTATGTGTTCTCCTGGAGACATCAACTAATGAGGCTGAAGGACGGAAC
 
. : . : . : . : . : . :
rJMSF038B07- GCCTGGTCTGTTGGTAAAGGGGCACTAGGTTTTCGTTGGTATGAAAGTGAGCCAGAAGAA
                      ____________________________________________________________
consensus GCCTGGTCTGTTGGTAAAGGGGCACTAGGTTTTCGTTGGTATGAAAGTGAGCCAGAAGAA
 
. : . : . : . : . : . :
rJMSF038B07- ACCTGCCTCTGCAGAGAACATGCACCCCATCCTCTCCGATTCAGCATAGATGACTCTGCA
                      ____________________________________________________________
consensus ACCTGCCTCTGCAGAGAACATGCACCCCATCCTCTCCGATTCAGCATAGATGACTCTGCA
 
. : . : . : . : . : . :
rJMSF038B07- GCAACACGTCGTCTTGTGGCATCATCTATGTACAATAGATCATCAATCCTTGCCATTAAG
                      ____________________________________________________________
consensus GCAACACGTCGTCTTGTGGCATCATCTATGTACAATAGATCATCAATCCTTGCCATTAAG
 
. : . : . : . : . : . :
rJMSF038B07- TTGAAGGCTATGCTCTCCAACACCCTAGAATAGCTCTCAAGGATTGATTGCCCGACATCC
                      ____________________________________________________________
consensus TTGAAGGCTATGCTCTCCAACACCCTAGAATAGCTCTCAAGGATTGATTGCCCGACATCC
 
. : . : . : . : . : . :
rJMSF038B07- CTGTTATACTGAATCTTTTGCATGTCCAATGTAGTCTGCCGGAGCCCAGGTAAATTTAGC
                      ____________________________________________________________
consensus CTGTTATACTGAATCTTTTGCATGTCCAATGTAGTCTGCCGGAGCCCAGGTAAATTTAGC
 
. : . : . : . : . : . :
rJMSF038B07- TTCATGCTCCTAAGGATGGCCTCAGCTCGTTCTGATAACATTTTATCCCTTTCCTTGTTA
                      ____________________________________________________________
consensus TTCATGCTCCTAAGGATGGCCTCAGCTCGTTCTGATAACATTTTATCCCTTTCCTTGTTA
 
. : . : . : . : . : . :
rJMSF038B07- CCAACAAGACCTTTCATTGTGCCTCCCCATGATGCCTTTCCACTTTTCGCTGGATTCAAT
                      ____________________________________________________________
consensus CCAACAAGACCTTTCATTGTGCCTCCCCATGATGCCTTTCCACTTTTCGCTGGATTCAAT
 
. : . : . : . : . : . :
rJMSF038B07- TGCTTCTTTCTGTGCTTCTGCCTCCAGATATGCATTGCGGCCTCAATTCTATTAGCAATT
JMFN039P08+ TCTTTTTGTGCTTCTGCCTCCAGATATGCATTGCAGCCTCAATTCTATTAGCAATT
                      ____________________________________________________________
consensus TGCTTCTTTTTGTGCTTCTGCCTCCAGATATGCATTGCGGCCTCAATTCTATTAGCAATT
 
. : . : . : . : . : . :
rJMSF038B07- TCTGAAGCTGTATACTCTGATGATAGGTCCAAGTAATCAAGAAGGCATTCTGGGGACAAC
JMFN039P08+ TCTGAAGCTGTATACTCCGATGATAGGTCCAAGTAATCAAGAAGGCATTTTGGGGACAAA
                      ____________________________________________________________
consensus TCTGAAGCTGTATACTCTGATGATAGGTCCAAGTAATCAAGAAGGCATTTTGGGGACAAC
 
. : . : . : . : . : . :
rJMSF038B07- TGCCCAGTAGTAATGTCACT
JMFN039P08+ TTCCCAGTAGTAATGTCACTTGTATATAATAAAACCACTTCCAAAAATGTTGGAAAAAAA
                      ____________________________________________________________
consensus TTCCCAGTAGTAATGTCACTTGTATATAATAAAACCACTTCCAAAAATGTTGGAAAAAAA
 
. : . : . : . : . : . :
JMFN039P08+ CAAAGTAAATTGCATCTCAACCAAACCTCCAATATAGCAGTACTACTTAGCTGCATTTGC
                      ____________________________________________________________
consensus CAAAGTAAATTGCATCTCAACCAAACCTCCAATATAGCAGTACTACTTAGCTGCATTTGC
 
. : . : . : . : . : . :
JMFN039P08+ TCTTCTCTATGTCCGGCCATGTCCTCTTTCATTAGCACAATAGTTAGCCGCTGTGCAGCT
                      ____________________________________________________________
consensus TCTTCTCTATGTCCGGCCATGTCCTCTTTCATTAGCACAATAGTTAGCCGCTGTGCAGCT
 
. : . : . : . : . : . :
JMFN039P08+ TGCGGTTGCGGAGGCCGGAGAGCCACTCGGAGCGACGGCTTCGGCCTTCAGTAGTTCAGT
JMSF007K23+ GCCACTCGGAGCGACGGCTTCGGCCTTCAGTAGTTCAGT
JMSF020P01+ GCCACTCAGAGCGACAGCTTCTGCCTTCAGTAGTTCAGT
                      ____________________________________________________________
consensus TGCGGTTGCGGAGGCCGGAGAGCCACTCGGAGCGACGGCTTCGGCCTTCAGTAGTTCAGT
 
. : . : . : . : . : . :
JMFN039P08+ GCGACGGCTTCGTAGAACAGGGCGACGGACTTCTGCTGCGGAGGCCGGAAAGCAGACGGC
JMSF007K23+ GCGACGGCTTCGTAGAACAGGGCGACGGACTTCTGCTGCGGAGGCCGGAAAGCAGACGGC
JMSF020P01+ GCGACGGCTTCGTAGAACAGGGCGATAGACTTCTGCTGCAGAGGCCGGAAAGCAGACGGC
                      ____________________________________________________________
consensus GCGACGGCTTCGTAGAACAGGGCGACGGACTTCTGCTGCGGAGGCCGGAAAGCAGACGGC
 
. : . : . : . : . : . :
JMFN039P08+ GACTCAAGGGTTTAGGACGAGGGTTTCGACCTTCAGTAGTTCAGTGCGAGTGTGCGACAA
JMSF007K23+ GACTCAAGGGTTTAGGACGAGGGTTTCGATCTTCAGTAGTTCAGTGCGAGTGTGCGACAA
JMSF020P01+ GACTCAAGGGTTTAGGACGAGGGTTTCGACCTTCAGTAGTTCAGTGCGAGTGTGCGACAG
                      ____________________________________________________________
consensus GACTCAAGGGTTTAGGACGAGGGTTTCGACCTTCAGTAGTTCAGTGCGAGTGTGCGACAA
 
. : . : . : . : . : . :
JMFN039P08+ CTTCGGAGAACAGGCCGACGAACTTCAACTACAGAGGCCGAAGAGCAAACGGCGACTCCG
JMSF007K23+ CTTCGGAGAACAGGCCGACGAACTTCAACTACAGAGGCCGAAGAGCAAACGGCGACTCCG
JMSF020P01+ CTTCGGAGAACAGGCCGACGAACTTCAACTACAGAGGCCGGAGAGCAAACGGCGACTCCA
                      ____________________________________________________________
consensus CTTCGGAGAACAGGCCGACGAACTTCAACTACAGAGGCCGAAGAGCAAACGGCGACTCCG
 
. : . : . : . : . : . :
JMFN039P08+ GTGGTGGGAGCGAAGACGACGGGGAGGCTTTCCTGGCAGCGGAGGCGGCTGTGACGGCGT
JMSF007K23+ GTGGTGGGAGCGAAGACGACGGGGAGGCTTTCCTGGCAGCGGAGGCGGCTGTGACGGCGT
JMSF020P01+ GTGGTGGGAGCGAAGACGACGGGGAGGCTTTCCTGGCAGCGGAGGCGGCTGTGACGGCGT
                      ____________________________________________________________
consensus GTGGTGGGAGCGAAGACGACGGGGAGGCTTTCCTGGCAGCGGAGGCGGCTGTGACGGCGT
 
. : . : . : . : . : . :
JMFN039P08+ GC
JMSF007K23+ GCGTAGGCGTTTGGTTGTGCGATGGAGCTCAGACT
JMSF020P01+ GCGTAGGCGTTTGGTTGTGCGATGGAGCTTAGACTGTAAGCGTGCGAAGGGTTTGGTGAC
                      ____________________________________________________________
consensus GCGTAGGCGTTTGGTTGTGCGATGGAGCTTAGACTGTAAGCGTGCGAAGGGTTTGGTGAC
 
. : . : . : . : . : . :
JMSF020P01+ GTTGGTCTAAGTGTGTTTTTTTAAGTGAGCATGAGTAGGGTAACGTCCAAAATTTTGACC
                      ____________________________________________________________
consensus GTTGGTCTAAGTGTGTTTTTTTAAGTGAGCATGAGTAGGGTAACGTCCAAAATTTTGACC