Contig 005065:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF045O03+                                                               ATAGGTGG
                      ____________________________________________________________
consensus                                                                 ATAGGTGG
 
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JMSF045O03+           AGGCGGNGAAGCCATTGGTGGTGGTGATACTGAAATTGGAGGAGGAGATGTCACATTAGC
                      ____________________________________________________________
consensus             AGGCGGNGAAGCCATTGGTGGTGGTGATACTGAAATTGGAGGAGGAGATGTCACATTAGC
 
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JMFS117E03+                                        GAGGAGTGCCACCGTTGGCA-TGGGCTGAGA
JMSF045O03+           CACAGAAGGGGACTGTGGGGGTAAAGAAGGAGGAGTGCCACCGTTGGCATTGGGCTGAGA
                      ____________________________________________________________
consensus             CACAGAAGGGGACTGTGGGGGTAAAGAAGGAGGAGTGCCACCGTTGGCATTGGGCTGAGA
 
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JMFS117E03+           AGAGGATTCCGGCGCCGGAGATTTTGGAGGTGAGGGCTGCGGCGGTGGGCTAGATGCTAT
JMSF045O03+           AGAGGATTCCGGCGCCGGAGATTTTGGAGGTGAGGGCTGCGGCGGTGGGCTAGATGCTAT
JMSF020M09+                                                        TGGGCTAGATGCTAT
                      ____________________________________________________________
consensus             AGAGGATTCCGGCGCCGGAGATTTTGGAGGTGAGGGCTGCGGCGGTGGGCTAGATGCTAT
 
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JMFS117E03+           TGGTGGAACAGGCGATGGGGCAGAATTAGGAGACGAACTACCAGACATTTCACTGTCAAT
JMSF045O03+           TGGTGGAACAGGCGATGGGGCAGAATTAGGAGACGAACTACCAGACATTTCACTGTCAAT
JMSF020M09+           TGGTGGAACAGGCGATGGGGCAGAATTAGGAGACGAACTNCCAGACATTTCACTGTCAAT
                      ____________________________________________________________
consensus             TGGTGGAACAGGCGATGGGGCAGAATTAGGAGACGAACTACCAGACATTTCACTGTCAAT
 
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JMFS117E03+           CCTTTAACCAAATCTAACCATTTCTCAGATGCATTAAAGTTCACGCAATAATTCAACAAT
JMSF045O03+           CCTTTAACCAAATCTAACCATTTCTCAGATGCATTAAAGTTCACGCAATAATTCAACAAT
JMSF020M09+           CCTTTAACCAAATCTAACCATTTCTCAGATGCATTAAAGTTCACGCAATAATTCANCAAT
                      ____________________________________________________________
consensus             CCTTTAACCAAATCTAACCATTTCTCAGATGCATTAAAGTTCACGCAATAATTCAACAAT
 
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JMFS117E03+           CCCTAGTCAAGCTCAAGTTTTTAGACAATTCAACACCCAAACAAATCAAATCTCCCCTCC
JMSF045O03+           CCCTAGTCAAGCTCAAGTTTTTAGACAATTCAACACCCAAACAAATCAAATCTCCCCTCC
JMSF020M09+           CCCTAGTCAAGNTCAAGTTTTTAGACAATTCAACACCCAAACAAATCAAATCTCCCCTCC
                      ____________________________________________________________
consensus             CCCTAGTCAAGCTCAAGTTTTTAGACAATTCAACACCCAAACAAATCAAATCTCCCCTCC
 
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JMFS117E03+           CCATCATTCATTCATCACAAGTTCACAACAAATCGATAAACGCGTCCGGGAAAGTTCAAG
JMSF045O03+           CCATCATTCATTCATCACAAGTTCACAACAAATCGATAAACGCGTCCGGGAAAGTTCAAG
JMSF020M09+           CCATCATTCATTCATCACAAGTTCACAACAAATCGATAAACGCGTCCGGGAAAGTTCAAG
                      ____________________________________________________________
consensus             CCATCATTCATTCATCACAAGTTCACAACAAATCGATAAACGCGTCCGGGAAAGTTCAAG
 
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JMFS117E03+           CAAACCAATCATCAAACACTTAACAGACCAAAAAAGCTAAACTCTACGCCAGCGAGCAAA
JMSF045O03+           CAAACCAATCATCAAACACTTAACAGACCAAAAAAGCTAAACTCTACGCCAGCGAGCAAA
JMSF020M09+           CAAACCAATCATCAAACACTTAACAGACCAAAAAAGCTAAACTCTACGCCAGCGAGCAAA
                      ____________________________________________________________
consensus             CAAACCAATCATCAAACACTTAACAGACCAAAAAAGCTAAACTCTACGCCAGCGAGCAAA
 
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JMFS117E03+           ATGCAAGAATCAATAAATCCGTGCAGAAATCTCAGAAAAATTTTAAAAAAACCGAAACCC
JMSF045O03+           ATGCAAGAATCAATAAATCCGTGCAGAAATCTCAGAAAAATTTTAAAAAAACCGAAACCC
JMSF020M09+           ATGCAAGAATCAATAAATCCGTGCAGAAATNTCAGAAAAATTTTAAAAAAACCGAAACCC
                      ____________________________________________________________
consensus             ATGCAAGAATCAATAAATCCGTGCAGAAATCTCAGAAAAATTTTAAAAAAACCGAAACCC
 
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JMFS117E03+           TGTTCGCGCCGACTGATTCACCAATGCACGCCCAACAGCCACTGTAGCGCAAATCAAATC
JMSF045O03+           TGTTCGCGCCGACTGATTCACCAATGCACGCCCAACAGCCACTGTAGCGCAAATCAAATC
JMSF020M09+           TGTTCGCGCCGACTGATTCACCAATGCACGCCCAACAGCCACTGTAGCGCAAATCAAATC
                      ____________________________________________________________
consensus             TGTTCGCGCCGACTGATTCACCAATGCACGCCCAACAGCCACTGTAGCGCAAATCAAATC
 
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JMFS117E03+           CGATAGCCCACTCAAGCGAATCCGAATGGTGAAATTTCTCAGAAAGACTTCACCTTTAAC
JMSF045O03+           CGATAGCCCACTCAAGCGAATCCGAATGGTGAAATTTCTCAGAAAGACTTCACCTTTAAC
JMSF020M09+           CGATAGCCCACTCAAGCGAATCCGAATGGTGAAATTTCTCAGAAAGACTTCACCTTTAAC
                      ____________________________________________________________
consensus             CGATAGCCCACTCAAGCGAATCCGAATGGTGAAATTTCTCAGAAAGACTTCACCTTTAAC
 
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JMFS117E03+           TCTCCACAACAAACTTGGAGGTTAAACTTCACCCAAATCGCA                  
JMSF045O03+           TCTCCACAACAAACTTGGAGGTTAAACTTCACCCAAATCGCATCCAATCTGCATCGTACC
JMSF020M09+           TCTCCACAACAAACTTGGAGGTTAAACTTCACCCAAATCGCATCCAATCTGCATCGTACC
                      ____________________________________________________________
consensus             TCTCCACAACAAACTTGGAGGTTAAACTTCACCCAAATCGCATCCAATCTGCATCGTACC