| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS110B03 | Sequence | 611 | 005060 (3) | ref|XP_009592744.1| | 6e-67 | PREDICTED: polyribonucleotide nucleotidyltransferase 1, chloroplastic-like [Nic | |||||
| JMSF008A14 | Sequence | 265 | 005060 (3) | ref|XP_009592744.1| | 7e-51 | PREDICTED: polyribonucleotide nucleotidyltransferase 1, chloroplastic-like [Nic | 765 | 009957 (2) | ref|XP_011069965.1| | 4e-11 | PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic |
| JMSF020B23 | Sequence | 595 | 005060 (3) | ref|XP_009759527.1| | 3e-38 | PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic | 744 | 009957 (2) | ref|XP_011069965.1| | 1e-07 | PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic |
This contig is upended
. : . : . : . : . : . :
JMSF008A14+ CCATCATAACTTA
____________________________________________________________
consensus CCATCATAACTTA
. : . : . : . : . : . :
JMSF008A14+ ATACCCANGAAAGTACTTGANCTTCATGGTAGAATCCCTTAAGCATAGTTGGCCGTAGAG
JMFS110B03+ GAAAGTACTTGAACTTCATGGTAGAATCCCTTAAGCATAGTTGGCCGTAGAG
____________________________________________________________
consensus ATACCCANGAAAGTACTTGAACTTCATGGTAGAATCCCTTAAGCATAGTTGGCCGTAGAG
. : . : . : . : . : . :
JMSF008A14+ GTCGATCTATCAACCTACAAATGTGAACCTCGTGATCCTTTGCTCTCCCTTCTCGTTTGA
JMFS110B03+ GTCGATCTATCAACCTACAAATGTGAACCTCGTGATCCTTTGCTCTCCCTTCTCGTTTGA
____________________________________________________________
consensus GTCGATCTATCAACCTACAAATGTGAACCTCGTGATCCTTTGCTCTCCCTTCTCGTTTGA
. : . : . : . : . : . :
JMSF008A14+ AAAATCCTCCACTGGTGCGACCAGCTGCCGAAAATCTTTCTTGATATTGAACAGATAGAG
JMFS110B03+ AAAATCCTCCACTGGTGCGACCAGCTGCCGAAAATCTTTCTTGATATTGAACAGATAGAG
JMSF020B23+ CCTCCACTGGTGCGACCAGCTGCCGAAAATCTTTCTTGATATTGAACAGATAGAG
____________________________________________________________
consensus AAAATCCTCCACTGGTGCGACCAGCTGCCGAAAATCTTTCTTGATATTGAACAGATAGAG
. : . : . : . : . : . :
JMSF008A14+ GGAAGAAATCAGAAGGCTCGCTCGGATCATCAGCTAAGCATACAGTTGTATAGATAATAG
JMFS110B03+ GGAAGAAATCAGAAGGCTCGCTCGGATCATCAGCTAAGCATACAGTTGTATAGATAATAG
JMSF020B23+ GGAAGAAATCAGAAGGCTCGCTCGGATCATCAGCTAAGCATACAGTTGTATAGATAATAG
____________________________________________________________
consensus GGAAGAAATCAGAAGGCTCGCTCGGATCATCAGCTAAGCATACAGTTGTATAGATAATAG
. : . : . : . : . : . :
JMSF008A14+ TTTCCCCATCC
JMFS110B03+ TTTCCCCATCCGTTACAGTAACTGCGCCACTAGCTTGCCTGCCGACATGACCTGTCTCAA
JMSF020B23+ TTTCCCCATCCGTTACAGTAACTGCGCCACTAGCTTGCCTGCCGACATGACCTGTCTCAA
____________________________________________________________
consensus TTTCCCCATCCGTTACAGTAACTGCGCCACTAGCTTGCCTGCCGACATGACCTGTCTCAA
. : . : . : . : . : . :
JMFS110B03+ CCGTTATATAACGGTCTCCAACAGGAATCCTGACTGAATAGGGGCGAGGCAAGGAGGCAG
JMSF020B23+ CCGTTATATAACGGTCTCCAACAGGAATCCTGACTGAATAGGGGCGAGGCAAGGAGGCAG
____________________________________________________________
consensus CCGTTATATAACGGTCTCCAACAGGAATCCTGACTGAATAGGGGCGAGGCAAGGAGGCAG
. : . : . : . : . : . :
JMFS110B03+ GAGAGGCAGAAAACGACGAAGACGACGCTGCGTCCGAAGTAGCTCGAACAGCCAACTGAT
JMSF020B23+ GAGAGGCAGAAAACGACGAAGACGACGCTGCGTCCGAAGTAGCTCGAACAGCCAACTGAT
____________________________________________________________
consensus GAGAGGCAGAAAACGACGAAGACGACGCTGCGTCCGAAGTAGCTCGAACAGCCAACTGAT
. : . : . : . : . : . :
JMFS110B03+ AACATAGTTTGCCGCTCTTTCTTCTTCTAGTCGGAGCTCTTCTTCTAGCAATGGAGGAAG
JMSF020B23+ AACATAGTTTGCCGCTCTTTCTTCTTCTAGTCGGAGCTCTTCTTCTAGCAATGGAGGAAG
____________________________________________________________
consensus AACATAGTTTGCCGCTCTTTCTTCTTCTAGTCGGAGCTCTTCTTCTAGCAATGGAGGAAG
. : . : . : . : . : . :
JMFS110B03+ GTGTGAGTTGCAGAGGAAGGAATCTGTAGCGAGCTGTGGTAGGCGTGAAGTGCAGAGGCC
JMSF020B23+ GTGTGAGTTGCAGAGGAAGGAATCTGTAGCGAGCTGTGGTAGGCGTGAAGTGCAGAGGCC
____________________________________________________________
consensus GTGTGAGTTGCAGAGGAAGGAATCTGTAGCGAGCTGTGGTAGGCGTGAAGTGCAGAGGCC
. : . : . : . : . : . :
JMFS110B03+ GGCCATGGAAGGTAGGGTTTGCCAACATTTCTTCCACTGAAGGAGAGTGACAGTAGTGAG
JMSF020B23+ GGCCATGGAAGGTAGGGTTTGCCAACATTTCTTCCACTGAAGGAGAGTGACAGTAGTGAG
____________________________________________________________
consensus GGCCATGGAAGGTAGGGTTTGCCAACATTTCTTCCACTGAAGGAGAGTGACAGTAGTGAG
. : . : . : . : . : . :
JMFS110B03+ AGCGTGAGGAATGGAACT
JMSF020B23+ AGCGTGAGGAATGGAACTTATCCGTTTCGTTACAGTGTCTGGAACGGTGGATAGCAAAGA
____________________________________________________________
consensus AGCGTGAGGAATGGAACTTATCCGTTTCGTTACAGTGTCTGGAACGGTGGATAGCAAAGA
. : . : . : . : . : . :
JMSF020B23+ AATCTGTATCGTGTTTATATATAGTCGCTAAAAGGCCGCCAGTTCAAGTGAGGCGCGACC
____________________________________________________________
consensus AATCTGTATCGTGTTTATATATAGTCGCTAAAAGGCCGCCAGTTCAAGTGAGGCGCGACC