Contig 005058:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010B19Sequence283005058 (2)ref|XP_009771401.1|3e-12PREDICTED: transcription factor HBP-1a-like [Nicotiana sylvestris]496008457 (2)
JMSF019O20Sequence254005058 (2)722008457 (2)ref|XP_011082310.1|9e-55PREDICTED: transcription factor HBP-1a-like isoform X2 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF010B19+ CAAGAACCCAN
                      ____________________________________________________________
consensus CAAGAACCCAN
 
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JMSF010B19+ GTGGAGGCATAGGAGAATATGCCTGAAAACCAGACCAGTCTGGGTTGACTGTGCCAGTGG
                      ____________________________________________________________
consensus GTGGAGGCATAGGAGAATATGCCTGAAAACCAGACCAGTCTGGGTTGACTGTGCCAGTGG
 
. : . : . : . : . : . :
JMSF010B19+ TTGATGGTGAAGCTTGCTCTTGTGAATTAGGAGTTTTTGGCTCCTTTGCTTCCTTTGCCT
                      ____________________________________________________________
consensus TTGATGGTGAAGCTTGCTCTTGTGAATTAGGAGTTTTTGGCTCCTTTGCTTCCTTTGCCT
 
. : . : . : . : . : . :
JMSF010B19+ CCTTTGAGGATTTGCTCACCTCGCTACTACCCATAGTCCAGCTGCACCACTGCCTGAAAA
                      ____________________________________________________________
consensus CCTTTGAGGATTTGCTCACCTCGCTACTACCCATAGTCCAGCTGCACCACTGCCTGAAAA
 
. : . : . : . : . : . :
JMSF010B19+ TCCCTCAAACCATCCGCAGAGATTCGACGAATCTGAGGAAGTGATGCTCAGTTTCACTTC
JMSF019O20+ CTCAGTTTCACTTC
                      ____________________________________________________________
consensus TCCCTCAAACCATCCGCAGAGATTCGACGAATCTGAGGAAGTGATGCTCAGTTTCACTTC
 
. : . : . : . : . : . :
JMSF010B19+ AGCTCCGAGTGCGCTCAGTCCCGGCTAAAAC
JMSF019O20+ AGCTCCGAGTGCGCTCAGTCCCGGCTAAAACTCAACAAGTGGTATGCGCGTGTGAGTATG
                      ____________________________________________________________
consensus AGCTCCGAGTGCGCTCAGTCCCGGCTAAAACTCAACAAGTGGTATGCGCGTGTGAGTATG
 
. : . : . : . : . : . :
JMSF019O20+ TGTATATGTAAAGATGAAATGCGTGAAAGCGATGTGGAGGGACAAAGAAGGGTATTTTCC
                      ____________________________________________________________
consensus TGTATATGTAAAGATGAAATGCGTGAAAGCGATGTGGAGGGACAAAGAAGGGTATTTTCC
 
. : . : . : . : . : . :
JMSF019O20+ GGCGTCGGGAGAGCAACGAGGGATTTGACGGTGAGATCGTCGTTCGTCGACACGGCAAGT
                      ____________________________________________________________
consensus GGCGTCGGGAGAGCAACGAGGGATTTGACGGTGAGATCGTCGTTCGTCGACACGGCAAGT
 
. : . : . : . : . : . :
JMSF019O20+ CGCGCTTTCCCCAGAGAAATTGCAGAGCAATAGGGGGGGAGAGCGCTAGGTGGTCGTCCC
                      ____________________________________________________________
consensus CGCGCTTTCCCCAGAGAAATTGCAGAGCAATAGGGGGGGAGAGCGCTAGGTGGTCGTCCC