Contig 005055:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019I12-                                    AAAGATATTACAATTTTCATGGTTCATTTTCAGT
                      ____________________________________________________________
consensus                                       AAAGATATTACAATTTTCATGGTTCATTTTCAGT
 
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rJMSF019I12-          AGCAATTATTGTTCTTGAGTCTTTGGGGGTGTGTGTTCAGTACTAGGCGTAATAGTAACT
                      ____________________________________________________________
consensus             AGCAATTATTGTTCTTGAGTCTTTGGGGGTGTGTGTTCAGTACTAGGCGTAATAGTAACT
 
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rJMSF019I12-          TAGGATTGCAACTGCAGCTGCAACTGCAACTCCAATCACAACTCTCCCGCACAACTTAGT
                      ____________________________________________________________
consensus             TAGGATTGCAACTGCAGCTGCAACTGCAACTCCAATCACAACTCTCCCGCACAACTTAGT
 
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rJMSF019I12-          AGAGGAAGGTGGTGAAGTAAAGCCCAGCTCTGACAACTTCTTGTGAGACTCTGCATAATC
                      ____________________________________________________________
consensus             AGAGGAAGGTGGTGAAGTAAAGCCCAGCTCTGACAACTTCTTGTGAGACTCTGCATAATC
 
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rJMSF019I12-          TCTGAAAAATGCCTCTTCATCCTCGGCATAAAGTAGCACATACTGGCGGAATTTAGGATC
                      ____________________________________________________________
consensus             TCTGAAAAATGCCTCTTCATCCTCGGCATAAAGTAGCACATACTGGCGGAATTTAGGATC
 
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rJMSF019I12-          TTCCATCAGAGCTTTATCCGTGGGCAGTTTTAATAGGTCATCAGAATCTCCTTTAAGAAG
                      ____________________________________________________________
consensus             TTCCATCAGAGCTTTATCCGTGGGCAGTTTTAATAGGTCATCAGAATCTCCTTTAAGAAG
 
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rJMSF019I12-          TTCCACAAAATATGAATTATCAAATTTCAAAGGCTCCTTGGTCCACTGGCCCTCAAAGCC
                      ____________________________________________________________
consensus             TTCCACAAAATATGAATTATCAAATTTCAAAGGCTCCTTGGTCCACTGGCCCTCAAAGCC
 
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rJMSF019I12-          TGATCTGTCCCTGTGAGCTTTTCCCAGTGTGTGGCCTCCAGACAATGCCACAATATCCTT
JMSF019I12+                                                                   CCTT
                      ____________________________________________________________
consensus             TGATCTGTCCCTGTGAGCTTTTCCCAGTGTGTGGCCTCCAGACAATGCCACAATATCCTT
 
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rJMSF019I12-          GTCAGTTAAGCCCATTCTATGGAAGACACTTCTCAGGTGAGATGGACCTTGTTTGGCATC
JMSF019I12+           GTCAGTTAAGCCCATTCTATGGAAGACACTTCTCAGGTGAGATGGACCTTGTTNGGCATC
                      ____________________________________________________________
consensus             GTCAGTTAAGCCCATTCTATGGAAGACACTTCTCAGGTGAGATGGACCTTGTTTGGCATC
 
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rJMSF019I12-          AGGAAGGCGCCCTTCTTCTGGTGACTCCAATGAGTCCTTTCTACCGGGGACGAAATCGAT
JMSF019I12+           AGGAAGGCGCCCTTCTTCTGGTGACTCCAATGAGTCCTTTCTACCGGGGACGAAATCGAT
                      ____________________________________________________________
consensus             AGGAAGGCGCCCTTCTTCTGGTGACTCCAATGAGTCCTTTCTACCGGGGACGAAATCGAT
 
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rJMSF019I12-          GATAGGACCTCCAGTGACCTCAACAGCAACAACCCCAGCAAGCTGGTAGAGGTCAGCATA
JMSF019I12+           GATAGGACCTCCAGTGACCTCAACAGCAACAACCCCAGCAAGCTGGTAGAGGTCAGCATA
                      ____________________________________________________________
consensus             GATAGGACCTCCAGTGACCTCAACAGCAACAACCCCAGCAAGCTGGTAGAGGTCAGCATA
 
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rJMSF019I12-          TGTAATTTTTGGATGATAGGTTTTTACTTCCTCGCAAATATCAATTGCAAGTTTCAATCC
JMSF019I12+           TGTAATTTTTGGATGATAGGTTTTTACTTCCTCGCAAATATCAATTGCAAGTTTCAATCC
                      ____________________________________________________________
consensus             TGTAATTTTTGGATGATAGGTTTTTACTTCCTCGCAAATATCAATTGCAAGTTTCAATCC
 
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rJMSF019I12-          AGCATTGGCAGCATGCGTGTATTCTTCCGGATTTCTAATGGATC                
JMSF019I12+           AGCATTGGCAGCATGCGTGTATTCTTCCGGATTTCTAATGGATCCATTAGGACCTCCAGT
                      ____________________________________________________________
consensus             AGCATTGGCAGCATGCGTGTATTCTTCCGGATTTCTAATGGATCCATTAGGACCTCCAGT
 
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JMSF019I12+           CTTCGTAAAGGCATCATACGTGCCGGCATCATGCCACGCCAAGCGAAGCATGAGAGGAGC
                      ____________________________________________________________
consensus             CTTCGTAAAGGCATCATACGTGCCGGCATCATGCCACGCCAAGCGAAGCATGAGAGGAGC
 
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JMSF019I12+           AATGTTCATGCTGGAGATGACAGATCGGAGATCTCCCCTTGTCAGCTCTATTTCCTTCAG
                      ____________________________________________________________
consensus             AATGTTCATGCTGGAGATGACAGATCGGAGATCTCCCCTTGTCAGCTCTATTTCCTTCAG
 
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JMSF019I12+           ATACTCGGCGTCCACTGCTGGTGCTACCGCCATTGGATCAGAGCTCGAGAAAGTAAAATG
                      ____________________________________________________________
consensus             ATACTCGGCGTCCACTGCTGGTGCTACCGCCATTGGATCAGAGCTCGAGAAAGTAAAATG
 
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JMSF019I12+           ATGAAATAATCGGTGCGCGGTTTTATTCAACTGAATCGCAATGCTTACAGGTATACGACC
                      ____________________________________________________________
consensus             ATGAAATAATCGGTGCGCGGTTTTATTCAACTGAATCGCAATGCTTACAGGTATACGACC