Contig 005052:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019E13Sequence516005052 (4)dbj|BAF95173.1|4e-13hypothetical protein [Ipomoea nil]732022521dbj|BAF95173.1|5e-123hypothetical protein [Ipomoea nil]
JMSF031N14Sequence620005052 (4)dbj|BAF95173.1|6e-69hypothetical protein [Ipomoea nil]201023564
JMSF039F12Sequence604005052 (4)dbj|BAF95173.1|5e-69hypothetical protein [Ipomoea nil]
JMSF050N07Sequence680005052 (4)dbj|BAF95173.1|4e-72hypothetical protein [Ipomoea nil]

Alignment

This contig is upended


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JMSF039F12+                                    TAGGATTCTCGTAAGGCTGCTTCAACACGGGAAAT
JMSF031N14+                                    TAGGATTCTCGTAAGGCTGCTTCAACACGGGAAAT
JMSF050N07+                        CCTTCAATGTTGTAGGATTCTCGTAAGGCTGCTTCAACACGGGAAAT
                      ____________________________________________________________
consensus                          CCTTCAATGTTGTAGGATTCTCGTAAGGCTGCTTCAACACGGGAAAT
 
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JMSF039F12+           CTGAGCTTCCATTGCAGAAACAAAGTTTCTATGCCTGGTCATCGTAATCTCGTCAGCACG
JMSF031N14+           TTGAGCTTCCATTGCAGAAACAAAGTTTCTATGCCTGGTCATCGTAATCTCGTCAGCACG
JMSF050N07+           TTGAGCTTCCATTGCAGAAACAAAGTTTCTATGCCTGGTCATCGTAATCTCGTCAGCACG
                      ____________________________________________________________
consensus             TTGAGCTTCCATTGCAGAAACAAAGTTTCTATGCCTGGTCATCGTAATCTCGTCAGCACG
 
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JMSF039F12+           ATTTCTGTAGCTCAGCCTAACCGCCTTCTCAAACTCATCCAGCTGCCATTTTGCTGTGCC
JMSF031N14+           ATTTCTGTAGCTCAGCCTAACCGCCTTCTCAAACTCATCCAGCTGCCATTTTGCTGTGCC
JMSF050N07+           ATTTCTGTAGCTCAGCCTAACCGCCTTCTCAAACTCATCCAGCTGCCATTTTGCTGTGCC
                      ____________________________________________________________
consensus             ATTTCTGTAGCTCAGCCTAACCGCCTTCTCAAACTCATCCAGCTGCCATTTTGCTGTGCC
 
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JMSF039F12+           TAAAGCCATCTGAAGCTCTCCCCGGAGCTCATCTATAAACTGAGGTGCTACCCCTTCTCT
JMSF031N14+           TAAAGCCATCTGAAGCTCTCCCCGGAGCTCATCTATAAACTGAGGTGCTACCCCTTCTCT
JMSF050N07+           TAAAGCCATCTGAAGCTCTCCCCGGAGCTCATCTATAAACTGAGGTGCTACCCCTTCTCT
                      ____________________________________________________________
consensus             TAAAGCCATCTGAAGCTCTCCCCGGAGCTCATCTATAAACTGAGGTGCTACCCCTTCTCT
 
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JMSF039F12+           CCTCTCTCTTACCCAGGTCCTATAAGCTGATTCCATTATATCGGCAGATTTCTGAACCTC
JMSF031N14+           CCTCTCTCTTACCCAGGTCCTATAAGCTGATTCCATTATATCGGCAGATTTCTGAACCTC
JMSF050N07+           CCTCTCTCTTACCCAGGTCCTATAAGCTGATTCCATTATATCGGCAGATTTCTGAACCTC
JMSF019E13+                   TTACCCAGGTCNTATAAGNTGATTCCATTATATCGGCAGATTTNTGAACCTC
                      ____________________________________________________________
consensus             CCTCTCTCTTACCCAGGTCCTATAAGCTGATTCCATTATATCGGCAGATTTCTGAACCTC
 
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JMSF039F12+           CTCGGCAGCGGAGAAGAAGATGTCCTTCTGCCATAAGTCAAAACTGTTGGCGACCAGCAT
JMSF031N14+           CTCGGCAGCGGAGAAGAAGATGTCCTTCTGCCATAAGTCAAAACTGTTGGCGACCAGCAT
JMSF050N07+           CTCGGCAGCGGAGAAGAAGATGTCCTTCTGCCATAAGTCAAAACTGTTGGCGACCAGCAT
JMSF019E13+           CTCGGCAGCGGAGAAGAAGATGTCCTTNTGCCATAAGTCAAAACTGTTGGCGACCAGCAT
                      ____________________________________________________________
consensus             CTCGGCAGCGGAGAAGAAGATGTCCTTCTGCCATAAGTCAAAACTGTTGGCGACCAGCAT
 
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JMSF039F12+           CTTTGCTTCTCTCGTCTCCCCAATTCAACAAATTGGCCACCGCCGATTCAAAATCAAATT
JMSF031N14+           CTTTGCTTCTCTCGTCTCCCCAATTCAACAAATTGGCCACCGCCGATTCAAAATCAAATT
JMSF050N07+           CTTTGCTTCTCTCGTCTCCCCAATTCAACAAATTGGCCACCGCCGATTCAAAATCAAATT
JMSF019E13+           CTTTGCTTCTCTCGTCTCCCCAATTCAACAAATTGGCCACCGCCGATTCAAAATCAAATT
                      ____________________________________________________________
consensus             CTTTGCTTCTCTCGTCTCCCCAATTCAACAAATTGGCCACCGCCGATTCAAAATCAAATT
 
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JMSF039F12+           CCTGTGTATATATAATAATAATACGGGAAAAGAGAGGATTGAGATGCGCACAAGTTAGCT
JMSF031N14+           CCTGTGTATATATAATAATAATACGGGAAAAGAGAGGATTGAGATGCGCACAAGTTAGCT
JMSF050N07+           CCTGTGTATATATAATAATAATACGGGAAAAGAGAGGATTGAGATGCGCACAAGTTAGCT
JMSF019E13+           CCTGTGTATATATAATAATAATACGGGAAAAGAGAGGATTGAGATGCGCACAAGTTAGCT
                      ____________________________________________________________
consensus             CCTGTGTATATATAATAATAATACGGGAAAAGAGAGGATTGAGATGCGCACAAGTTAGCT
 
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JMSF039F12+           AAATCCTGGTCGGTGTTGTCTTCTCTTCTTTGCTGAGAAGGCGAAGCAAAGAAGGAAGAG
JMSF031N14+           AAATCCTGGTCGGTGTTGTCTTCTCTTCTTTGCTGAGAAGGCGAAGCAAAGAAGGAAGAG
JMSF050N07+           AAATCCTGGTCGGTGTTGTCTTCTCTTCTTTGCTGAGAAGGCGAAGCAAAGAAGGAAGAG
JMSF019E13+           AAATCCTGGTCGGTGTTGTCTTCTCTTCTTTGCTGAGAAGGCGAAGCAAAGAAGGAAGAG
                      ____________________________________________________________
consensus             AAATCCTGGTCGGTGTTGTCTTCTCTTCTTTGCTGAGAAGGCGAAGCAAAGAAGGAAGAG
 
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JMSF039F12+           AGAGAAAGAAAGCACAGAAACAGAGAGAGAGAAAGAGACGTATGAGCGAATCTCTTCCCC
JMSF031N14+           AGAGAAAGAAAGCACAGAAACAGAGAGAGAGAAAGAGACGTATGAGCGAATCTCTTCCCC
JMSF050N07+           AGAGAAAGAAAGCACAGAAACAGAGAGAGAGAAAGAGACGTATGAGCGAATCTCTTCCCC
JMSF019E13+           AGAGAAAGAAAGCACAGAAACAGAGAGAGAGAAAGAGACGTATGAGCGAATCTCTTCCCC
                      ____________________________________________________________
consensus             AGAGAAAGAAAGCACAGAAACAGAGAGAGAGAAAGAGACGTATGAGCGAATCTCTTCCCC
 
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JMSF039F12+           CTTCCCTCTCCCCTCTTCTTCTGTCTTT                                
JMSF031N14+           CTTCCCTCTCCCCTCTTCTTCTGTCTTTGCTTTTTCTCTATTCTC               
JMSF050N07+           CTTCCCTCTCCCCTCTTCTTCTGTCTTTGCTTTTTCTCTATTCTCTCTCCCCCTAGTATT
JMSF019E13+           CTTCCCTCTCCCCTCTTCTTCTGTCTTTGCTTTTTCTCTATTCTCTCTCCCCCTAGTATT
                      ____________________________________________________________
consensus             CTTCCCTCTCCCCTCTTCTTCTGTCTTTGCTTTTTCTCTATTCTCTCTCCCCCTAGTATT
 
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JMSF050N07+           TGGGTCCGTTTATAGTTGGGAATTTTTCCTC                             
JMSF019E13+           TGGGTCCGTTTATAGTTGGGAATTTTTCCTCATTTTACCAAACAACTCGCGCCTGTCTTC
                      ____________________________________________________________
consensus             TGGGTCCGTTTATAGTTGGGAATTTTTCCTCATTTTACCAAACAACTCGCGCCTGTCTTC