Contig 005044:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018B22Sequence453005044 (2)721002824 (2)ref|XP_009606293.1|4e-64PREDICTED: transcription factor GTE2-like [Nicotiana tomentosiformis]
JMSF018B23Sequence233005044 (2)732002824 (2)ref|XP_009606293.1|4e-67PREDICTED: transcription factor GTE2-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF018B22+ GAAGGCCGCGTACTCTCATGATCCATAGGTTGA
                      ____________________________________________________________
consensus GAAGGCCGCGTACTCTCATGATCCATAGGTTGA
 
. : . : . : . : . : . :
JMSF018B22+ GGCCGCGGCGGTGGAGCAGGACCATTGAAGTGACGCTNGAAATGCTTGTTTGAAGTATCA
                      ____________________________________________________________
consensus GGCCGCGGCGGTGGAGCAGGACCATTGAAGTGACGCTNGAAATGCTTGTTTGAAGTATCA
 
. : . : . : . : . : . :
JMSF018B22+ TGGCGGTTGAGATTATTGTGGCCGGGGTTATGGTTGAACCTGTCGCCGGAATGAGGGTTA
                      ____________________________________________________________
consensus TGGCGGTTGAGATTATTGTGGCCGGGGTTATGGTTGAACCTGTCGCCGGAATGAGGGTTA
 
. : . : . : . : . : . :
JMSF018B22+ CTGGTAGGCCTACAGGTAAACTTCGCCCGTTGCACCCTTCCATCGCCCCAGTGCGCTTCA
                      ____________________________________________________________
consensus CTGGTAGGCCTACAGGTAAACTTCGCCCGTTGCACCCTTCCATCGCCCCAGTGCGCTTCA
 
. : . : . : . : . : . :
JMSF018B23+ CGGCGAAAACAGCCGATGCCATAGAAATAGAGGATTTTTGGAAGCTGTACTCA
JMSF018B22+ TTCCTGCCGGCGAAAACAGCCGATGCCATAGAAATAGAGGATTTTTGGAAGCTGTACTCA
                      ____________________________________________________________
consensus TTCCTGCCGGCGAAAACAGCCGATGCCATAGAAATAGAGGATTTTTGGAAGCTGTACTCA
 
. : . : . : . : . : . :
JMSF018B23+ AGCGGCCATGNCTAATCTCCGGCGAGGAAGCGGAGAGAACTCATGATGAAACTGCCGAAA
JMSF018B22+ AGCGGCCATGGCTAATCTCCGGCGAGGAAGCGGAGAGAACTCATGATGAAACTGCCGAAA
                      ____________________________________________________________
consensus AGCGGCCATGGCTAATCTCCGGCGAGGAAGCGGAGAGAACTCATGATGAAACTGCCGAAA
 
. : . : . : . : . : . :
JMSF018B23+ AGGTTTTATCTTCGCCGGTCGGAAAAATAACTGAATGGAGGGAATATTTGAAAGTAATGA
JMSF018B22+ AGGTTTTATCTTCGCCGGTCGGAAAAATAACTGAATGGAGGGAATATTTGAAAGTAATGA
                      ____________________________________________________________
consensus AGGTTTTATCTTCGCCGGTCGGAAAAATAACTGAATGGAGGGAATATTTGAAAGTAATGA
 
. : . : . : . : . : . :
JMSF018B23+ ATAGGGAGGGAGGGGGCGAGGGTTTCGAGGACCCTCTGTTCGCCGGAGTTTTGAACGATC
JMSF018B22+ ATAGGGAGGGAGGGGGCGAGGGTTTCGAGGACCCTCTGTTCGCCGGAGTTTTGAACGATC
                      ____________________________________________________________
consensus ATAGGGAGGGAGGGGGCGAGGGTTTCGAGGACCCTCTGTTCGCCGGAGTTTTGAACGATC