Contig 005043:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018B17Sequence231005043 (2)770011299 (3)ref|XP_009772093.1|333PREDICTED: uncharacterized protein LOC104222551 [Nicotiana sylvestris]
JMSF032J24Sequence706005043 (2)ref|XP_009589511.1|236PREDICTED: uncharacterized protein LOC104086873 [Nicotiana tomentosiformis]663011299 (3)gb|EYU42061.1|1e-95hypothetical protein MIMGU_mgv1a006990mg [Erythranthe guttata]

Alignment

This contig is upended


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JMSF032J24+                         AACAAGTGGTACATTTCCAATATTCCCTATTCCAATTTGTATAATA
                      ____________________________________________________________
consensus                           AACAAGTGGTACATTTCCAATATTCCCTATTCCAATTTGTATAATA
 
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JMSF032J24+           GTAAACTTGAAAAATGGATACGGTGGACGGACGATTGTTGCAACAACTAGACCTATTATG
                      ____________________________________________________________
consensus             GTAAACTTGAAAAATGGATACGGTGGACGGACGATTGTTGCAACAACTAGACCTATTATG
 
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JMSF032J24+           GAGCCTGATATTGTGGCAATGACAACATTAACAGGGATAAACCACCACTGAAGCATCTTC
                      ____________________________________________________________
consensus             GAGCCTGATATTGTGGCAATGACAACATTAACAGGGATAAACCACCACTGAAGCATCTTC
 
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JMSF032J24+           TCGAATGTGATTGCTTGCCCAAGTTGAGAGAATATCAGGCATGGGAGCAATAGTGAAAAG
                      ____________________________________________________________
consensus             TCGAATGTGATTGCTTGCCCAAGTTGAGAGAATATCAGGCATGGGAGCAATAGTGAAAAG
 
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JMSF032J24+           ACCAACCCATTTAAAAGCTTTCTTCCATTTGCAGGCAAGATATTAACATACTTGGAAGCC
                      ____________________________________________________________
consensus             ACCAACCCATTTAAAAGCTTTCTTCCATTTGCAGGCAAGATATTAACATACTTGGAAGCC
 
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JMSF032J24+           ATGAGAAATCCCAGGAAACACATCGTGAAAACTTTAGCTATAGGTAAGACTGCAATCTTG
                      ____________________________________________________________
consensus             ATGAGAAATCCCAGGAAACACATCGTGAAAACTTTAGCTATAGGTAAGACTGCAATCTTG
 
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JMSF032J24+           ATAGAACCAAGCAAGGATGTCCCTCCACCTTGAGATTCTGTGAGAATCTCCATAAGCAAC
                      ____________________________________________________________
consensus             ATAGAACCAAGCAAGGATGTCCCTCCACCTTGAGATTCTGTGAGAATCTCCATAAGCAAC
 
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JMSF032J24+           CTCTGCACCCTATCCATCATACTATGAAAAAATCTCTTAAACTCTCCCTAAGATGAAGTA
                      ____________________________________________________________
consensus             CTCTGCACCCTATCCATCATACTATGAAAAAATCTCTTAAACTCTCCCTAAGATGAAGTA
 
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JMSF032J24+           ATTGGCTTTCCCGGTCACCCGAGGGGAAAAGGACCTGCTCTTAGTAGTAAGCCACCAGAA
JMSF018B17+                    CCCGGTCACCCGAGGGGAAAAGGACCTGCTCTTAGTAGTAAGCCACCAGAA
                      ____________________________________________________________
consensus             ATTGGCTTTCCCGGTCACCCGAGGGGAAAAGGACCTGCTCTTAGTAGTAAGCCACCAGAA
 
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JMSF032J24+           ACAATTCGCATACAATGTTCTCCAATCAAAACAACTGAATCCCAAACAGCTCAGATTCTT
JMSF018B17+           ACAATTCGCATACAATGTTCTCCAATCAAAACAACTGAATCCCAAACAGCTCAGATTCTT
                      ____________________________________________________________
consensus             ACAATTCGCATACAATGTTCTCCAATCAAAACAACTGAATCCCAAACAGCTCAGATTCTT
 
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JMSF032J24+           CAGCCCAGAAACGCCAGATACTCCACCACCTAACCTTTATCCCCGTTAATACGTAAGGTC
JMSF018B17+           CAGCCCAGAAACGCCAGATACTCCACCACCTAACCTTTATCCCCGTTAATACGTAAGGTC
                      ____________________________________________________________
consensus             CAGCCCAGAAACGCCAGATACTCCACCACCTAACCTTTATCCCCGTTAATACGTAAGGTC
 
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JMSF032J24+           TTGGCGAAAAGACTGGAGACGAATCTCGAATACTTGAGCTGCGGTTGGGACGATGAATTC
JMSF018B17+           TTGGCGAAAAGACTGGAGACGAATCTCGAATACTTGAGCTGCGGTTGGGACGATGAATTC
                      ____________________________________________________________
consensus             TTGGCGAAAAGACTGGAGACGAATCTCGAATACTTGAGCTGCGGTTGGGACGATGAATTC