Contig 005042:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS063D03+                                                             ATTTGATACA
JMFN030D05+                                                                    ACA
                      ____________________________________________________________
consensus                                                               ATTTGATACA
 
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JMFS063D03+           AATAAAAACCATCAAAAATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
JMFN033M16+                           AATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
JMFS059G01+                           AATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
JMFN005N13+             TAAAAACCATCAAAAATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
JMFN030D05+           AATAAAAACTATCAAAAATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
rJMFF018F05-                                 ATATTCATAATGTTCAAATTCAACAATCACCCAATCT
JMFN017G24-                           AATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
JMFF018F05+               AAAACCATCAAAAATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
rJMFF037C15-                                 ATATTCATAATGTTCAAATTCAACAATCACCCAATCT
JMFN002H04+                    CATCAAAAATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
JMFS153F12+                 AACCATCAAAAATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
JMFN010B01+                 AACCATCAAAAATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
JMFF037C15+                AAACCATCAAAAATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
JMFF001F12+                AAACCATCAAAAATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
rJMFF001F12-                                                        CAATCACCCAATCT
rJMFF029I05-                                                           TCACCCAATCT
JMSF017L07+                                                                    TCT
                      ____________________________________________________________
consensus             AATAAAAACCATCAAAAATCAAAATATTCATAATGTTCAAATTCAACAATCACCCAATCT
 
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JMFS063D03+           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
JMFN033M16+           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
JMFS059G01+           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
JMFN005N13+           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
JMFN030D05+           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
rJMFF018F05-          AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
JMFN017G24-           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAAAACCTTATTGTC
JMFF018F05+           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
rJMFF037C15-          AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
JMFN002H04+           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
JMFS153F12+           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
JMFN010B01+           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
JMFF037C15+           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
JMFF001F12+           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
JMFF029I05+                                                 CTATTATAAGAACCTTATTGTC
rJMFF001F12-          AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
rJMFF029I05-          AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
JMSF017L07+           AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
                      ____________________________________________________________
consensus             AAACATTCACATAACATTAAAAAAATATATATATTGTTCTATTATAAGAACCTTATTGTC
 
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JMFS063D03+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMFN033M16+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMFS059G01+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMFN005N13+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMFN030D05+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
rJMFF018F05-          AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMFN017G24-           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMFF018F05+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
rJMFF037C15-          AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMFN002H04+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMFS153F12+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMFN010B01+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMFF037C15+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMFF001F12+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMFF029I05+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
rJMFF001F12-          AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
rJMFF029I05-          AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
JMSF017L07+           AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
                      ____________________________________________________________
consensus             AATCATGGATACAAAGTAAATCGAAGGGACCACGCACACTTAAACATGTATAGAAGTGGT
 
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JMFS063D03+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMFN033M16+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMFS059G01+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMFN005N13+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMFN030D05+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
rJMFF018F05-          GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMFN017G24-           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMFF018F05+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
rJMFF037C15-          GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMFN002H04+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMFS153F12+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMFN010B01+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMFF037C15+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMFF001F12+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMFF029I05+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
rJMFF001F12-          GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
rJMFF029I05-          GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
JMSF017L07+           GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
                      ____________________________________________________________
consensus             GGTTTCCTGTATCACTGTCCATCTGTCTTCATTCACCCTTCAAAAGCAAGCTTCCAATGC
 
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JMFS063D03+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
JMFN033M16+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCTCTGGACTGAGT
JMFS059G01+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
JMFN005N13+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
JMFN030D05+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
rJMFF018F05-          ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
JMFN017G24-           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
JMFF018F05+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
rJMFF037C15-          ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
JMFN002H04+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
JMFS153F12+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
JMFN010B01+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
JMFF037C15+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
JMFF001F12+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
JMFF029I05+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
rJMFF001F12-          ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
rJMFF029I05-          ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
JMSF017L07+           ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
                      ____________________________________________________________
consensus             ACAGCAACAACACAGTCCCGCACAACAGCCCTTCCAGAAGCCGTCACCCCTGGACTGAGT
 
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JMFS063D03+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMFN033M16+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMFS059G01+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMFN005N13+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMFN030D05+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
rJMFF018F05-          TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMFN017G24-           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMFF018F05+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
rJMFF037C15-          TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMFN002H04+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMFS153F12+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMFN010B01+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMFF037C15+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMFF001F12+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMFF029I05+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
rJMFF001F12-          TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
rJMFF029I05-          TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
JMSF017L07+           TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
                      ____________________________________________________________
consensus             TTGCGCGGGAACAGAAGGCTCGCTGCGGCCTTGGCCATCTCTGACGGGATATCCCGGCGG
 
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JMFS063D03+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
JMFN033M16+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
JMFS059G01+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
JMFN005N13+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
JMFN030D05+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
rJMFF018F05-          CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCTGCTGCGGCTGCGGCTGCTGTGAGTA
JMFN017G24-           CGGAAGCGGCGGCGGCGCAAAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
JMFF018F05+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCTGCTGCGGCTGCGGCTGCTGTGAGTA
rJMFF037C15-          CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
JMFN002H04+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGACTGCGGCTGCTGTGAGTA
JMFS153F12+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
JMFN010B01+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
JMFF037C15+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
JMFF001F12+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
JMFF029I05+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
rJMFF001F12-          CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
rJMFF029I05-          CGGAAGCGGCGGCGGCGCANAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
JMSF017L07+           CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
                      ____________________________________________________________
consensus             CGGAAGCGGCGGCGGCGCAGAAAATCCACCTTGCGGCTGCGGCTGCGGCTGCTGTGAGTA
 
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JMFS063D03+           CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMFN033M16+           CGGAAACGCCGCCGTTCCAGG---TGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMFS059G01+           CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMFN005N13+           CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMFN030D05+           CGGAAACGCCGCCGTTCCAGG---TGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
rJMFF018F05-          CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMFN017G24-           CGGAAACGCCGCCGTTCCAGG---TGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMFF018F05+           CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
rJMFF037C15-          CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMFN002H04+           CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMFS153F12+           CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMFN010B01+           CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMFF037C15+           CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMFF001F12+           CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMFF029I05+           CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
rJMFF001F12-          CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
rJMFF029I05-          CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
JMSF017L07+           CGGAAACGCCGCCGTTCCAGG---TGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
                      ____________________________________________________________
consensus             CGGAAACGCCGCCGTTCCAGGTGCTGCTTGATGAGGATTCTGACTCATGCTGGAAATCGA
 
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JMFS063D03+           TGAAGAACACCCGA                                              
JMFN033M16+           TGAAGAACACCCGATCGATCTGATCCGAAACTGATT                        
JMFS059G01+           TGAAGAACACCCGA                                              
JMFN005N13+           TGAAGAACACCCGATCAATCTGATCCGAAA                              
JMFN030D05+           TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATC                   
rJMFF018F05-          TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATCTAAGAAAAGTAGTGTAAAG
JMFN017G24-           TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATCTA                 
JMFF018F05+           TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATCTAAGAAAAGTAGTGTAAAG
rJMFF037C15-          TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATCTAAGAAAAGTAGTGTAAAG
JMFN002H04+           TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATCTAA                
JMFS153F12+           TGAAGAACACCCGATCGATCTGATCCGAAAC                             
JMFN010B01+           TGAAGAACACCCGATCG                                           
JMFF037C15+           TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATCTAAGAAAAGTAGTGTAAAG
JMFF001F12+           TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATCTAAGAAAAGTAGTGTAAAG
JMFF029I05+           TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATCTAAGAAAAGTAGTGTAAAG
rJMFF001F12-          TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATCTAAGAAAAGTAGTGTAAAG
rJMFF029I05-          TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATCTAAGAAAAGTAGTGTAAAG
JMSF017L07+           TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATCGGGGCACCGGGCAATTGCA
                      ____________________________________________________________
consensus             TGAAGAACACCCGATCGATCTGATCCGAAACTGATTTGATCTAAGAAAAGTAGTGTAAAG
 
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rJMFF018F05-          TGGTTATTAT                                                  
JMFF018F05+           TGGTTATTAT                                                  
rJMFF037C15-          TGGTTATTATG                                                 
JMFF037C15+           TGGTTATTATG                                                 
JMFF001F12+           TGGTTATTATGTGC                                              
JMFF029I05+           TGGTTATTATGTGC                                              
rJMFF001F12-          TGGTTATTATGTGC                                              
rJMFF029I05-          TGGTTATTATGTGC                                              
JMSF017L07+           AGTGGGGAAGGTACGTAGTAGTGGAATTCAATTGTTGCTTAGACGTGGACGGCGAAGCCC
                      ____________________________________________________________
consensus             TGGTTATTATGTGCGTAGTAGTGGAATTCAATTGTTGCTTAGACGTGGACGGCGAAGCCC