Contig 005039:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013K01Sequence574005039 (9)ref|XP_009589533.1|113PREDICTED: uncharacterized protein LOC104086890 [Nicotiana tomentosiformis]677005039 (9)ref|XP_009589533.1|137PREDICTED: uncharacterized protein LOC104086890 [Nicotiana tomentosiformis]
JMFF040E23Sequence563005039 (9)ref|XP_009589533.1|113PREDICTED: uncharacterized protein LOC104086890 [Nicotiana tomentosiformis]715005039 (9)ref|XP_009589533.1|136PREDICTED: uncharacterized protein LOC104086890 [Nicotiana tomentosiformis]
JMFF042F15Sequence611005039 (9)ref|XP_009589533.1|116PREDICTED: uncharacterized protein LOC104086890 [Nicotiana tomentosiformis]580005039 (9)ref|XP_009589533.1|122PREDICTED: uncharacterized protein LOC104086890 [Nicotiana tomentosiformis]
JMFN008A21Sequence623005039 (9)ref|XP_009589533.1|137PREDICTED: uncharacterized protein LOC104086890 [Nicotiana tomentosiformis]
JMFS081G11Sequence627005039 (9)ref|XP_009589533.1|91.7PREDICTED: uncharacterized protein LOC104086890 [Nicotiana tomentosiformis]
JMSF017F19Sequence249005039 (9)795019288ref|XP_009589533.1|117PREDICTED: uncharacterized protein LOC104086890 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF042F15- AGAAAATAAAATAACGTTATTTT
rJMFF013K01- ACGTTATTTT
rJMFF040E23- ACGTTATTTT
                      ____________________________________________________________
consensus AGAAAATAAAATAACGTTATTTT
 
. : . : . : . : . : . :
rJMFF042F15- TTCTACAAATATATTTATGACAGGAGCACAATAGTCAAACAAGTGAACATTTCATAGTCT
rJMFF013K01- TTCTACAAATATATTTATGACAGGAGCACAATAGTCAAACAAGTGAACATTTCATAGTCT
JMFN008A21+ AGTGAACATTTCATAGTCT
rJMFF040E23- TTCTACAAATATATTTATGACAGGAGCACAATAGTCAAACAAGTGAACATTTCATAGTCT
                      ____________________________________________________________
consensus TTCTACAAATATATTTATGACAGGAGCACAATAGTCAAACAAGTGAACATTTCATAGTCT
 
. : . : . : . : . : . :
rJMFF042F15- ACTCTGTCTACAAAACAAGAAACCATTTTTCATTAATCAAAATTAGGGTTTCTTCTCCTC
rJMFF013K01- ACTCTGTCTACAAAACAAGAAACCATTTTTCATTAATCAAAATTAGGGTTTCTTCTCCTC
JMFN008A21+ ACTCTGTCTACAAAACAAGAAACCATTTTTCATTAATCAAAATTAGGGTTTCTTCTCCTC
rJMFF040E23- ACTCTGTCTACAAAACAAGAAACCATTTTTCATTAATCAAAATTAGGGTTTCTTCTCCTC
                      ____________________________________________________________
consensus ACTCTGTCTACAAAACAAGAAACCATTTTTCATTAATCAAAATTAGGGTTTCTTCTCCTC
 
. : . : . : . : . : . :
rJMFF042F15- AACCGGCGATGTCTTTGCAGCTGGCTGGTTAGATCCGTGGTGAAGGAACTCCTCCAATTT
rJMFF013K01- AACCGGCGATGTCTTTGCAGCTGGCTGGTTAGATCCGTGGTGAAGGAACTCCTCCAATTT
JMFN008A21+ AACCGGCGATGTCTTTGCAGCTGGCTGGTTAGATCCGTGGTGAAGGAACTCCTCCAATTT
rJMFF040E23- AACCGGCGATGTCTTTGCAGCTGGCTGGTTAGATCCGTGGTGAAGGAACTCCTCCAATTT
                      ____________________________________________________________
consensus AACCGGCGATGTCTTTGCAGCTGGCTGGTTAGATCCGTGGTGAAGGAACTCCTCCAATTT
 
. : . : . : . : . : . :
rJMFF042F15- ATCATCCAATTCCTCCACCTTGTCCATAAGGTCTTCAACTATCTGAGCATCTTTTGCAGT
rJMFF013K01- ATCATCCAATTCCTCCACCTTGTCCATAAGGTCTTCAACTATCTGAGCATCTTTTGCAGT
JMFN008A21+ ATCATCCAATTCCTCCACCTTGTCCATAAGGTCTTCAACTATCTGAGCATCTTTTGCAGT
rJMFF040E23- ATCATCCAATTCCTCCACCTTGTCCATAAGGTCTTCAACTATCTGAGCATCTTTTGCAGT
JMFF042F15+ T
                      ____________________________________________________________
consensus ATCATCCAATTCCTCCACCTTGTCCATAAGGTCTTCAACTATCTGAGCATCTTTTGCAGT
 
. : . : . : . : . : . :
rJMFF042F15- TTCCTCGGCAACATGTTCGATGGCCTCCACGATGTCTTTGAGTTTGCCGGCCGGAAGATT
rJMFF013K01- TTCCTCGGCAACATGTTCGATGGCCTCCACGATGTCTTTGAGTTTGCCGGCCGGAAGATT
JMFN008A21+ TTCCTCGGCAACATGTTCGATGGCCTCCACGATGTCTTTGAGTTTGCCGGCCGGAAGATT
rJMFF040E23- TTCCTCGGCAACATGTTCGATGGCCTCCACGATGTCTTTGAGTTTGCCGGCCGGAAGATT
JMFF042F15+ TTCCTCGGCAACATGTTCGATGGCCTCCACGATGTCTTTGAGTTTGCCGGCCGGAAGATT
JMFF013K01+ TCCACGATGTCTTTGAGTTTGCCGGCCGGAAGATT
JMFF040E23+ TTTGAGTTTGCCGGCCGGAAGATT
                      ____________________________________________________________
consensus TTCCTCGGCAACATGTTCGATGGCCTCCACGATGTCTTTGAGTTTGCCGGCCGGAAGATT
 
. : . : . : . : . : . :
rJMFF042F15- CTCCTTGAAACCCTCCGCCGCCTTGTCGACTTCGTGCGCCACGTTCCCTACCACATCCGC
rJMFF013K01- CTCCTTGAAACCCTCCGCCGCCTTGTCGACTTCGTGCGCCACGTTCCCTACCACATCCGC
JMFN008A21+ CTCCTTGAAACCCTCCGCCGCCTTGTCGACTTCGTGCGCCACGTTCCCTACCACATCCGC
rJMFF040E23- CTCCTTGAAACCCTCCGCCGCCTTGTCGACTTCGTGCGCCACGTTCCCTACCACATCCGC
JMFF042F15+ CTCCTTGAAACCCTCCGCCGCCTTGTCGACTTCGTGCGCCACGTTCCCTACCACATCCGC
JMFF013K01+ CTCCTTGAAACCCTCCGCCGCCTTGTCGACTTCGTGCGCCACGTTCCCTACCACATCCGC
JMFF040E23+ CTCCTTGAAACCCTCCGCCGCCTTGTCGACTTCGTGCGCCACGTTCCCTACCACATCCGC
                      ____________________________________________________________
consensus CTCCTTGAAACCCTCCGCCGCCTTGTCGACTTCGTGCGCCACGTTCCCTACCACATCCGC
 
. : . : . : . : . : . :
rJMFF042F15- CACCTTCTCCACCGTCTCCGCCGCCGCCTCAACTTGCTTTGACAATGTCAATAATCTTGC
rJMFF013K01- CACCTTCTCCACCGTCTCCGCCGCCGCCTCAACTTGCTTTGACAATGTCAATAATCTTGC
JMFN008A21+ CACCTTCTCCACCGTCTCCGCCGCCGCCTCAACTTGCTTTGACAATGTCAATAATCTTGC
rJMFF040E23- CACCTTCTCCACCGTCTCCGCCGCCGCCTCAACTTGCTTTGACAATGTCAATAATCTTGC
JMFF042F15+ CACCTTCTCCACCGTCTCCGCCGCCGCCTCAACTTGCTTTGACAATGTCAATAATCTTGC
JMFF013K01+ CACCTTCTCCACCGTCTCCGCCGCCGCCTCAACTTGCTTTGACAATGTCAATAATCTTGC
JMFS081G11+ TTGACAATGTCAATAATCTTGC
JMFF040E23+ CACCTTCTCCACCGTCTCCGCCGCCGCCTCAACTTGCTTTGACAATGTCAATAATCTTGC
                      ____________________________________________________________
consensus CACCTTCTCCACCGTCTCCGCCGCCGCCTCAACTTGCTTTGACAATGTCAATAATCTTGC
 
. : . : . : . : . : . :
rJMFF042F15- TGTAATCAAAGGTATTGCCACACACAATCCCGTAGCCCACGCCAACCAAGAATTATCTTC
rJMFF013K01- TGTAATCAAAGGTATTGCCACACACAATCCCGTAGCCCACGCCAACCAAGAATTATCTTC
JMFN008A21+ TGTAATCAAAGGTATTGCCACACACAATCCCGTAGCCCACGCCAACCAAGAATTATCTTC
rJMFF040E23- TGTAATCAAAGGTATTGCCACACACAATCCCGTAGCCCACGCCAACCAAGAATTATCTTC
JMFF042F15+ TGTAATCAAAGGTATTGCCACACACAATCCCGTAGCCCACGCCAACCAAGAATTATCTTC
JMFF013K01+ TGTAATCAAAGGTATTGCCACACACAATCCCGTAGCCCACGCCAACCAAGAATTATCTTC
JMFS081G11+ TGTAATCAAAGGTATTGCCACACACAATCCCGTAGCCCACGCCAACCAAGAATTATCTTC
JMFF040E23+ TGTAATCAAAGGTATTGCCACACACAATCCCGTAGCCCACGCCAACCAAGAATTATCTTC
                      ____________________________________________________________
consensus TGTAATCAAAGGTATTGCCACACACAATCCCGTAGCCCACGCCAACCAAGAATTATCTTC
 
. : . : . : . : . : . :
rJMFF042F15- AGAAGATGGCAAAAACGGAAGAAACCCCGAAAGAAAATCCCCAGCAACTTCCGGAGTGGC
rJMFF013K01- AGAAGATGGCAAAAACGGAAGAAACCCCGAAAGAAAATCCCCAGCAACTTCCGGAGTGGC
JMFN008A21+ AGAAGATGGCAAAAACGGAAGAAACCCCGAAAGAAAATCCCCAGCAACTTCCGGAGTGGC
rJMFF040E23- AGAAGATGGCAAAAACGGAAGAAACCCCGAAAGAAAATCCCCAGCAACTTCCGGAGTGGC
JMFF042F15+ AGAAGATGGCAAAAACGGAAGAAACCCCGAAAGAAAATCCCCAGCAACTTCCGGAGTGGC
JMFF013K01+ AGAAGATGGCAAAAACGGAAGAAACCCCGAAAGAAAATCCCCAGCAACTTCCGGAGTGGC
JMFS081G11+ AGAAGATGGCAAAAACGGAAGAAACCCCGAAAGAAAATCCCCAGCAACTTCCGGAGTGGC
JMFF040E23+ AGAAGATGGCAAAAACGGAAGAAACCCCGAAAGAAAATCCCCAGCAACTTCCGGAGTGGC
                      ____________________________________________________________
consensus AGAAGATGGCAAAAACGGAAGAAACCCCGAAAGAAAATCCCCAGCAACTTCCGGAGTGGC
 
. : . : . : . : . : . :
rJMFF042F15- ATGAACAACCAAGGCC
rJMFF013K01- ATGAACAACCAAGGCCCTTGATCTTTTCTTAGCAGAGGTTCTGAGGTTGCCTGGGAACGA
JMFN008A21+ ATGAACAACCAAGGCCCTTGATCTTTTCTTAGCAGAGGTTCTGAGGTTGCCTGGGAACGA
rJMFF040E23- ATGAACAACCAAGGCCCTTGATCTTTTCTTAGCAGAGGTTCTGAGGTTGCCTGGGAACGA
JMFF042F15+ ATGAACAACCAAGG-CCGTGATCTTTTCTTAGCAGAGGTTCTGAGGTTGCCTGGGAACGA
JMFF013K01+ ATGAACAACCAAGGCCCTTGATCTTTTCTTAGCAGAGGTTCTGAGGTTGCCTGGGAACGA
JMFS081G11+ ATGAACAACCAAGGCCCTTGATCTTTTCTTAGCAGAGGTTCTGAGGTTGCCTGGGAACGA
JMFF040E23+ ATGAACAACCAAGGCCCTTGATCTTTTCTTAGCAGAGGTTCTGAGGTTGCCTGGGAACGA
JMSF017F19+ TGGGAACGA
                      ____________________________________________________________
consensus ATGAACAACCAAGGCCCTTGATCTTTTCTTAGCAGAGGTTCTGAGGTTGCCTGGGAACGA
 
. : . : . : . : . : . :
rJMFF013K01- NGATTGATGATATTGAGGCTTTTGTTGAGATATGATTGTTGGGTTAACAAAACCCAGTGT
JMFN008A21+ GGATTGATGATATTGAGGCTTTTGTTGAGATATGATTGTTGGGTTAACAAAACCCAGTGT
rJMFF040E23- GGATTGATGATATTGAGGCTTTTGTTGAGATATGATTGTTGGGTTAACAAAACCCAGTGT
JMFF042F15+ GGATTGATGATATTGAGGCTTTTGTTGAGATATGATTGTTGGGTTAACAAAACCCAGTGT
JMFF013K01+ GGATTGATGATATTGAGGCTTTTGTTGAGATATGATTGTTGGGTTAACAAAACCCAGTGT
JMFS081G11+ GGATTGATGATATTGAGGCTTTTGTTGAGATATGATTGTTGGGTTAACAAAACCCAGTGT
JMFF040E23+ GGATTGATGATATTGAGGCTTTTGTTGAGATATGATTGTTGGGTTAACAAAACCCAGTGT
JMSF017F19+ GGATTGATGATATTGAGGCTTTTGTTGAGATATGATTGTTGGGTTAACAAAACCCAGTGT
                      ____________________________________________________________
consensus GGATTGATGATATTGAGGCTTTTGTTGAGATATGATTGTTGGGTTAACAAAACCCAGTGT
 
. : . : . : . : . : . :
rJMFF013K01- CTGA
JMFN008A21+ CTGA
rJMFF040E23- CTGAGATGTATTTGTGGAACTGGTATGGGAGATGGAGATGGAA
JMFF042F15+ CTGAGATGTATTTGTGGAACTGGTATGGGAGATGGAGATGGAAGAAAGAAGAGATGATGC
JMFF013K01+ CTGAGATGTATTTGTGGAACTGGTATGGGAGATGGAGATGGAAGAAAGAAGAGATGATGC
JMFS081G11+ CTGAGATGTATTTGTGGAACTGGTATGGGAGATGGAGATGGAAGAAAGAAGAGATGATGC
JMFF040E23+ CTGAGATGTATTTGTGGAACTGGTATGGGAGATGGAGATGGAAGAAAGAAGAGATGATGC
JMSF017F19+ CTGAGATGTATTTGTGGAACTGGTATGGGAGATGGAGATGGAAGAAAGAAGAGATGATGC
                      ____________________________________________________________
consensus CTGAGATGTATTTGTGGAACTGGTATGGGAGATGGAGATGGAAGAAAGAAGAGATGATGC
 
. : . : . : . : . : . :
JMFF042F15+ TGCCATGGCGATCGAACCAAGGTTTTCACTTTCTTCCCAAAACAAACACTTTTATTATAA
JMFF013K01+ TGCCATGGCGATCGAACCAAGGTTTTCACTTTCTTCCCAAAACAAACACTTTTATTATAA
JMFS081G11+ TGCCATGGCGATCGAACCAAGGTTTTCACTTTCTTCCCAAAACAAACACTTTTATTATAA
JMFF040E23+ TGCCATGGCGATCGAACCAAGGTTTTCACTTTCTTCCCAAAACAAACACTTTTATTATAA
JMSF017F19+ TGCCATGGCGATCGAACCAAGGTTTTCACTTTCTTCCCAAAACAAACACTTTTATTATAA
                      ____________________________________________________________
consensus TGCCATGGCGATCGAACCAAGGTTTTCACTTTCTTCCCAAAACAAACACTTTTATTATAA
 
. : . : . : . : . : . :
JMFF042F15+ TCTACCCGTTGAAGAACAGTCCTTATGTATATTAAAAAACAAGTTGGTAGAGATA
JMFF013K01+ TCTACCCGTTGAAGAACAGTCCTTATGTATATTAAAAAACAAGTTGGTAGAGATA
JMFS081G11+ TCTACCCGTTGAAGAACAGTCCTTATGTATATTAAA
JMFF040E23+ TCTACCCGTTGAAGAACAGTCCTTATGTATATTAAAAAACAAGTTGGTAGAGATA
JMSF017F19+ TCTACCCGTTGAAGAACAGTCCTTATGTATATTAAAAAACAAGTTGGTAGAGATAAGATC
                      ____________________________________________________________
consensus TCTACCCGTTGAAGAACAGTCCTTATGTATATTAAAAAACAAGTTGGTAGAGATAAGATC